| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545285
Identifier: 17545285
GI number: 17545285
Start: 610851
End: 611048
Strand: Reverse
Name: 17545285
Synonym: RSc0566
Alternate gene names: NA
Gene position: 611048-610851 (Counterclockwise)
Preceding gene: 17545286
Following gene: 17545284
Centisome position: 16.44
GC content: 64.65
Gene sequence:
>198_bases ATGACCACGCAAACCGCACCCATCATCGAAATCGGCGCAGACGACCTGCCGCTGCACTGCCCCACCAGCAAGACGCCGGC GTGGAACTACCACCCGCGCGTTTTCCTCGACGTGGCCGACACCGGCGAAGCCAAGTGCCCATACTGCGGCACCGTCTACA AGCTGGCCCCCGGCGTCGAAGTGAAGGGCCACCATTGA
Upstream 100 bases:
>100_bases GCAGTCGACGTTCTTCGACATCGTCAACGGCAAGAGCACCATCGAAAAGTACAAGGCGTGGCTGACCCTGGCCTGACCAC GCCCGCTGACCCTCATCATC
Downstream 100 bases:
>100_bases GCCGCCCGGACCTGCCGTACGCCGCGAGCCCCCTGCCCGCGGCGCTCCGATGATGCGCAAGATCCTGGTCGTCGCCCCCA ACTGGATCGGCGACGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MTTQTAPIIEIGADDLPLHCPTSKTPAWNYHPRVFLDVADTGEAKCPYCGTVYKLAPGVEVKGHH
Sequences:
>Translated_65_residues MTTQTAPIIEIGADDLPLHCPTSKTPAWNYHPRVFLDVADTGEAKCPYCGTVYKLAPGVEVKGHH >Mature_64_residues TTQTAPIIEIGADDLPLHCPTSKTPAWNYHPRVFLDVADTGEAKCPYCGTVYKLAPGVEVKGHH
Specific function: Unknown
COG id: COG4391
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7063; Mature: 6932
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQTAPIIEIGADDLPLHCPTSKTPAWNYHPRVFLDVADTGEAKCPYCGTVYKLAPGVE CCCCCCCEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEE VKGHH ECCCC >Mature Secondary Structure TTQTAPIIEIGADDLPLHCPTSKTPAWNYHPRVFLDVADTGEAKCPYCGTVYKLAPGVE CCCCCCEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEE VKGHH ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA