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The map label for this gene is rfaF [H]

Identifier: 17545284

GI number: 17545284

Start: 609776

End: 610801

Strand: Reverse

Name: rfaF [H]

Synonym: RSc0565

Alternate gene names: 17545284

Gene position: 610801-609776 (Counterclockwise)

Preceding gene: 17545285

Following gene: 17545283

Centisome position: 16.44

GC content: 69.88

Gene sequence:

>1026_bases
ATGATGCGCAAGATCCTGGTCGTCGCCCCCAACTGGATCGGCGACGCGCTGATGGCGCAGCCGCTGTTCGCGCAGATCAA
GGCGCGGCATCCGCGCGCGCAGATCCATGCCATCGCCCCGAAGTGGGTGGCGCCGGTGCTCGCGCGCATGCCCGAGATCA
CGCGCGTGCTGCCGACTGAACTGGCGCACGGCAAGCTGCAGCTCGGCAGCCGCACGATGTTCGCCCAGCAGCTCAAGGGG
GAATCGTTCGATGCCGCCTATGTGCTGCCGAACTCGTTCAAGAGCGCGCTGATCCCGTGGCTGGCCGGCATTCCGCTGCG
CATCGGCTACAAGGGCGAATCGCGGCTGGGCGTGCTCAACGTGCGCTACCCGAACCCGCCCAAGCGCGAACGGCCGCCGA
TGGTGCAGCACTATGCGGCGCTGGCCTTCAAGCCCGGCGCCAAGCTGCCCGAGACCCTGCCCGACCCGCAGCTGCGGGTG
GACCTGCCGCGCGTGGCCGCCACCTCGGCCAAGTTCGGCATTCCCGGCAACGCCCGGCTGATCGCCTTCTGCCCGGGCGC
GGAATACGGCACCGCCAAGCGCTGGCCCGCCGAGCACTTCGCCGAGCTGGCGCAGATGCTGCGGCGCTCGTTCCCGTACG
CGCACATCGTCACGCTCGGCTCGGCCAAGGATCGCGAGACCGCCGACGCCATCGCCGAGCGCGCGCCTTTCGTGCGCAAC
CTGTGCGGCGAGACCTCGCTGGACGAGGCCATCGAGCTGCTCGCCCGCGCCGAGGCCGCCATCTGCAACGACTCGGGCCT
GATGCACGTCACGGCTGCCCTGGGGCGCCCGCAGGTGGCCGTGTTCGGCTCGAGCGACCCGCGCCACACGCCGCCGCTGT
CACCCGCTGCGAGTATCATGTGGCTCCATCTCGAATGCAGCCCGTGCTTCGCCCGCGAATGCCCGCTCGGCCATCTGCGC
TGCCTGCGCGACATCGGTCCCGAGATGGTGTTTCATGAATTGCGCCGGCTGCTGCAGCCGGTGTAA

Upstream 100 bases:

>100_bases
GGCACCGTCTACAAGCTGGCCCCCGGCGTCGAAGTGAAGGGCCACCATTGAGCCGCCCGGACCTGCCGTACGCCGCGAGC
CCCCTGCCCGCGGCGCTCCG

Downstream 100 bases:

>100_bases
CGCTGTCACCGTCAGCCATTCCCTTCACGTCCTGCCGCCATGCCACGATTTGCCCGACTGTTCGAAGCCGCCGAGGACAT
CCTCGACGCCTACCGCGAAG

Product: ADP-heptose--lipopolysaccharide heptosyltransferase II protein

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MMRKILVVAPNWIGDALMAQPLFAQIKARHPRAQIHAIAPKWVAPVLARMPEITRVLPTELAHGKLQLGSRTMFAQQLKG
ESFDAAYVLPNSFKSALIPWLAGIPLRIGYKGESRLGVLNVRYPNPPKRERPPMVQHYAALAFKPGAKLPETLPDPQLRV
DLPRVAATSAKFGIPGNARLIAFCPGAEYGTAKRWPAEHFAELAQMLRRSFPYAHIVTLGSAKDRETADAIAERAPFVRN
LCGETSLDEAIELLARAEAAICNDSGLMHVTAALGRPQVAVFGSSDPRHTPPLSPAASIMWLHLECSPCFARECPLGHLR
CLRDIGPEMVFHELRRLLQPV

Sequences:

>Translated_341_residues
MMRKILVVAPNWIGDALMAQPLFAQIKARHPRAQIHAIAPKWVAPVLARMPEITRVLPTELAHGKLQLGSRTMFAQQLKG
ESFDAAYVLPNSFKSALIPWLAGIPLRIGYKGESRLGVLNVRYPNPPKRERPPMVQHYAALAFKPGAKLPETLPDPQLRV
DLPRVAATSAKFGIPGNARLIAFCPGAEYGTAKRWPAEHFAELAQMLRRSFPYAHIVTLGSAKDRETADAIAERAPFVRN
LCGETSLDEAIELLARAEAAICNDSGLMHVTAALGRPQVAVFGSSDPRHTPPLSPAASIMWLHLECSPCFARECPLGHLR
CLRDIGPEMVFHELRRLLQPV
>Mature_341_residues
MMRKILVVAPNWIGDALMAQPLFAQIKARHPRAQIHAIAPKWVAPVLARMPEITRVLPTELAHGKLQLGSRTMFAQQLKG
ESFDAAYVLPNSFKSALIPWLAGIPLRIGYKGESRLGVLNVRYPNPPKRERPPMVQHYAALAFKPGAKLPETLPDPQLRV
DLPRVAATSAKFGIPGNARLIAFCPGAEYGTAKRWPAEHFAELAQMLRRSFPYAHIVTLGSAKDRETADAIAERAPFVRN
LCGETSLDEAIELLARAEAAICNDSGLMHVTAALGRPQVAVFGSSDPRHTPPLSPAASIMWLHLECSPCFARECPLGHLR
CLRDIGPEMVFHELRRLLQPV

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=347, Percent_Identity=44.3804034582133, Blast_Score=277, Evalue=7e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 37559; Mature: 37559

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKILVVAPNWIGDALMAQPLFAQIKARHPRAQIHAIAPKWVAPVLARMPEITRVLPTE
CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCHHHHHHHHHH
LAHGKLQLGSRTMFAQQLKGESFDAAYVLPNSFKSALIPWLAGIPLRIGYKGESRLGVLN
HCCCEEECCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCEEEEE
VRYPNPPKRERPPMVQHYAALAFKPGAKLPETLPDPQLRVDLPRVAATSAKFGIPGNARL
EECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCEE
IAFCPGAEYGTAKRWPAEHFAELAQMLRRSFPYAHIVTLGSAKDRETADAIAERAPFVRN
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCHHHHH
LCGETSLDEAIELLARAEAAICNDSGLMHVTAALGRPQVAVFGSSDPRHTPPLSPAASIM
HCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEE
WLHLECSPCFARECPLGHLRCLRDIGPEMVFHELRRLLQPV
EEEEECCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRKILVVAPNWIGDALMAQPLFAQIKARHPRAQIHAIAPKWVAPVLARMPEITRVLPTE
CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCHHHHHHHHHH
LAHGKLQLGSRTMFAQQLKGESFDAAYVLPNSFKSALIPWLAGIPLRIGYKGESRLGVLN
HCCCEEECCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCEEEEE
VRYPNPPKRERPPMVQHYAALAFKPGAKLPETLPDPQLRVDLPRVAATSAKFGIPGNARL
EECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCEE
IAFCPGAEYGTAKRWPAEHFAELAQMLRRSFPYAHIVTLGSAKDRETADAIAERAPFVRN
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCHHHHH
LCGETSLDEAIELLARAEAAICNDSGLMHVTAALGRPQVAVFGSSDPRHTPPLSPAASIM
HCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEE
WLHLECSPCFARECPLGHLRCLRDIGPEMVFHELRRLLQPV
EEEEECCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2198271; 8478319 [H]