| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ilvE1 [H]
Identifier: 17545286
GI number: 17545286
Start: 611073
End: 612002
Strand: Reverse
Name: ilvE1 [H]
Synonym: RSc0567
Alternate gene names: 17545286
Gene position: 612002-611073 (Counterclockwise)
Preceding gene: 17545297
Following gene: 17545285
Centisome position: 16.47
GC content: 65.7
Gene sequence:
>930_bases ATGACCAGCATGGCTGACCGCGACGGCAAGATCTGGAAAGACGGCAAGCTGATCGAATGGCGCGACGCGCAACTCCACGT GCTCACCCACACCCTGCACTACGGCATGGGCGTGTTCGAGGGCGTGCGCGCGTACCAGACGCCGGCCGGCCCCGCCATCT TCCGCCTGTCCGAGCACACGCGCCGGCTGTTCAATTCGGCCAAGATCTTCCAGATGCAGATTCCGTTCTCGGAACAGCAG CTGATGGACGCGCAGCGCGAAGTCGTGCGTGCCAACGCGCTGGCGTCCTGCTACATCCGCCCGCTGGCGTGGCTCGGCTC CGAGAAGATGGGCGTGTCCGCCCGCGGCAACACCGTCCACGTGGCGATCGCCGCCTGGCCTTGGGGCGCCTACCTGGGCG AAGAAGGCATGCAGCGCGGCATCCGCGTCAAGACGTCGTCCTTCACGCGCCACCATGTGAACGTGTCGCTGGTGCGCGCC AAGGCCAGCGGCTACTACATCAACTCGATCCTCGCCAACCAGGAAGCCACCGGCCTGGGCTACGATGAAGCCCTGCTGCT CGACACCGAGGGCTATGTGAGCGAAGGCTCGGGCGAGAACGTCTTCATCGTCCGCAACGGCGTGATCTACACGCCCGACC TGGCCTCGTGCCTGGACGGCATCACCCGCGACGCAATCATCACCATCGCGGGCGACCTCGGCATCGAGGTGCGCGAGAAG CGCATCACCCGCGACGAGATGTACTGCGCGGACGAAGCCTTCTTCACCGGCACCGCGGCGGAAGTCACCCCGATCCGCGA ACTGGATGACCGCGTGATCGGCGCGGGCTCGCGCGGCCCGATCACCACGCAGCTGCAGTCGACGTTCTTCGACATCGTCA ACGGCAAGAGCACCATCGAAAAGTACAAGGCGTGGCTGACCCTGGCCTGA
Upstream 100 bases:
>100_bases ACGGAAACCGCCGCCAAGATCGGCGTTGGCGTCCCCGCCCCCACCCCTTACAATTCCGCCTTTGTCGGCATTTGAGCCCG GACACTCACAGGAGCCCTCC
Downstream 100 bases:
>100_bases CCACGCCCGCTGACCCTCATCATCATGACCACGCAAACCGCACCCATCATCGAAATCGGCGCAGACGACCTGCCGCTGCA CTGCCCCACCAGCAAGACGC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTSMADRDGKIWKDGKLIEWRDAQLHVLTHTLHYGMGVFEGVRAYQTPAGPAIFRLSEHTRRLFNSAKIFQMQIPFSEQQ LMDAQREVVRANALASCYIRPLAWLGSEKMGVSARGNTVHVAIAAWPWGAYLGEEGMQRGIRVKTSSFTRHHVNVSLVRA KASGYYINSILANQEATGLGYDEALLLDTEGYVSEGSGENVFIVRNGVIYTPDLASCLDGITRDAIITIAGDLGIEVREK RITRDEMYCADEAFFTGTAAEVTPIRELDDRVIGAGSRGPITTQLQSTFFDIVNGKSTIEKYKAWLTLA
Sequences:
>Translated_309_residues MTSMADRDGKIWKDGKLIEWRDAQLHVLTHTLHYGMGVFEGVRAYQTPAGPAIFRLSEHTRRLFNSAKIFQMQIPFSEQQ LMDAQREVVRANALASCYIRPLAWLGSEKMGVSARGNTVHVAIAAWPWGAYLGEEGMQRGIRVKTSSFTRHHVNVSLVRA KASGYYINSILANQEATGLGYDEALLLDTEGYVSEGSGENVFIVRNGVIYTPDLASCLDGITRDAIITIAGDLGIEVREK RITRDEMYCADEAFFTGTAAEVTPIRELDDRVIGAGSRGPITTQLQSTFFDIVNGKSTIEKYKAWLTLA >Mature_308_residues TSMADRDGKIWKDGKLIEWRDAQLHVLTHTLHYGMGVFEGVRAYQTPAGPAIFRLSEHTRRLFNSAKIFQMQIPFSEQQL MDAQREVVRANALASCYIRPLAWLGSEKMGVSARGNTVHVAIAAWPWGAYLGEEGMQRGIRVKTSSFTRHHVNVSLVRAK ASGYYINSILANQEATGLGYDEALLLDTEGYVSEGSGENVFIVRNGVIYTPDLASCLDGITRDAIITIAGDLGIEVREKR ITRDEMYCADEAFFTGTAAEVTPIRELDDRVIGAGSRGPITTQLQSTFFDIVNGKSTIEKYKAWLTLA
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI48994963, Length=298, Percent_Identity=47.6510067114094, Blast_Score=290, Evalue=9e-80, Organism=Caenorhabditis elegans, GI17565728, Length=327, Percent_Identity=24.7706422018349, Blast_Score=68, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322002, Length=263, Percent_Identity=26.9961977186312, Blast_Score=73, Evalue=5e-14,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 34245; Mature: 34114
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMADRDGKIWKDGKLIEWRDAQLHVLTHTLHYGMGVFEGVRAYQTPAGPAIFRLSEHT CCCCCCCCCCEECCCCEEEECCCEEEEEHHHHHHCCHHHHHHHHHCCCCCCEEEEEHHHH RRLFNSAKIFQMQIPFSEQQLMDAQREVVRANALASCYIRPLAWLGSEKMGVSARGNTVH HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEE VAIAAWPWGAYLGEEGMQRGIRVKTSSFTRHHVNVSLVRAKASGYYINSILANQEATGLG EEEEECCCHHHHCHHHHHCCEEEEECCCEEEEEEEEEEEEECCCEEEEHHHCCCCCCCCC YDEALLLDTEGYVSEGSGENVFIVRNGVIYTPDLASCLDGITRDAIITIAGDLGIEVREK CCCEEEEECCCCEECCCCCEEEEEECCEEECCCHHHHHCCCCCCEEEEEECCCCCEEHHH RITRDEMYCADEAFFTGTAAEVTPIRELDDRVIGAGSRGPITTQLQSTFFDIVNGKSTIE HCCHHHHHCCCCCEECCCCCCCCCHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCHHHHH KYKAWLTLA HHHHHEECC >Mature Secondary Structure TSMADRDGKIWKDGKLIEWRDAQLHVLTHTLHYGMGVFEGVRAYQTPAGPAIFRLSEHT CCCCCCCCCEECCCCEEEECCCEEEEEHHHHHHCCHHHHHHHHHCCCCCCEEEEEHHHH RRLFNSAKIFQMQIPFSEQQLMDAQREVVRANALASCYIRPLAWLGSEKMGVSARGNTVH HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEE VAIAAWPWGAYLGEEGMQRGIRVKTSSFTRHHVNVSLVRAKASGYYINSILANQEATGLG EEEEECCCHHHHCHHHHHCCEEEEECCCEEEEEEEEEEEEECCCEEEEHHHCCCCCCCCC YDEALLLDTEGYVSEGSGENVFIVRNGVIYTPDLASCLDGITRDAIITIAGDLGIEVREK CCCEEEEECCCCEECCCCCEEEEEECCEEECCCHHHHHCCCCCCEEEEEECCCCCEEHHH RITRDEMYCADEAFFTGTAAEVTPIRELDDRVIGAGSRGPITTQLQSTFFDIVNGKSTIE HCCHHHHHCCCCCEECCCCCCCCCHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCHHHHH KYKAWLTLA HHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]