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The map label for this gene is yggA [C]

Identifier: 17545104

GI number: 17545104

Start: 413289

End: 413927

Strand: Direct

Name: yggA [C]

Synonym: RSc0385

Alternate gene names: 17545104

Gene position: 413289-413927 (Clockwise)

Preceding gene: 17545103

Following gene: 17545106

Centisome position: 11.12

GC content: 73.24

Gene sequence:

>639_bases
ATGACGGGGCCCGGCCCGGAGAGCGCGCCGCTGATCGGCGCGGCGCTGTCGGGCTTCGGCCTGGGCGCGAGTCTGATCGT
GGCGATCGGCGCGCAGAACGCGTACGTGCTGCGGCAAGGGCTACGCCGCGAATACGTGCTCGGCGTGGTGCTGATCTGCG
CGCTGTGCGACATGGCGCTGATCGCGCTGGGCGTGGCGGGCATGGGCACGCTGATCTCGGCGCACCCGGCATGGCTGACG
GCGGTGCGCTGGGCCGGCGCGGCCTTCCTGCTGGCCTACGGCGCACGGGCGTTCCGGGCGGCGTGGCGCGGCGCCGAGCG
GCTGCAGGCGCGCAACGGCGACAAGGCCTCGCATGCGCAGGTGCTGGCGTCCGCGCTGGCGCTGTCGCTGCTCAATCCGC
ACGTCTATCTCGACACCGTGGTGCTGCTGGGCGCCATCGGCGGGCGCTACGCGATGCCGGCCAACGTGGCGTTCGCCGGC
GGCGCGATGTGCGCGTCGATCCTGTGGTTCTCGCTGCTGGGGTTCGGCGCACGGCTGCTGGAGCCGGTGTTCGCCAGGCC
GGTCGCCTGGCGGGTGCTCGATGCGCTGATCGGCGCGGTGATGTGGGCGATCGCGCTGACGCTGCTGATGGGCGGTTAG

Upstream 100 bases:

>100_bases
TGGAGGACTACCCGACGCTCGCCCGCGTCTTCGAGCACTGCATGGCCCAGCCGGCGTTCCAGCGCGCCGCGCCCGCCGCC
CAGCCCGACGCCGCGTCCGC

Downstream 100 bases:

>100_bases
CCCAGCAGCGCGTCGGCGAATTCGCGCGCGGAGAACGGCTGCAGGTCTTCCACCTGCTCGCCCACGCCGATGAAATATAC
CGGCACCGGCCGCTGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTGPGPESAPLIGAALSGFGLGASLIVAIGAQNAYVLRQGLRREYVLGVVLICALCDMALIALGVAGMGTLISAHPAWLT
AVRWAGAAFLLAYGARAFRAAWRGAERLQARNGDKASHAQVLASALALSLLNPHVYLDTVVLLGAIGGRYAMPANVAFAG
GAMCASILWFSLLGFGARLLEPVFARPVAWRVLDALIGAVMWAIALTLLMGG

Sequences:

>Translated_212_residues
MTGPGPESAPLIGAALSGFGLGASLIVAIGAQNAYVLRQGLRREYVLGVVLICALCDMALIALGVAGMGTLISAHPAWLT
AVRWAGAAFLLAYGARAFRAAWRGAERLQARNGDKASHAQVLASALALSLLNPHVYLDTVVLLGAIGGRYAMPANVAFAG
GAMCASILWFSLLGFGARLLEPVFARPVAWRVLDALIGAVMWAIALTLLMGG
>Mature_211_residues
TGPGPESAPLIGAALSGFGLGASLIVAIGAQNAYVLRQGLRREYVLGVVLICALCDMALIALGVAGMGTLISAHPAWLTA
VRWAGAAFLLAYGARAFRAAWRGAERLQARNGDKASHAQVLASALALSLLNPHVYLDTVVLLGAIGGRYAMPANVAFAGG
AMCASILWFSLLGFGARLLEPVFARPVAWRVLDALIGAVMWAIALTLLMGG

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=197, Percent_Identity=40.6091370558376, Blast_Score=134, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21896; Mature: 21765

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPGPESAPLIGAALSGFGLGASLIVAIGAQNAYVLRQGLRREYVLGVVLICALCDMAL
CCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALGVAGMGTLISAHPAWLTAVRWAGAAFLLAYGARAFRAAWRGAERLQARNGDKASHAQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VLASALALSLLNPHVYLDTVVLLGAIGGRYAMPANVAFAGGAMCASILWFSLLGFGARLL
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EPVFARPVAWRVLDALIGAVMWAIALTLLMGG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGPGPESAPLIGAALSGFGLGASLIVAIGAQNAYVLRQGLRREYVLGVVLICALCDMAL
CCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALGVAGMGTLISAHPAWLTAVRWAGAAFLLAYGARAFRAAWRGAERLQARNGDKASHAQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VLASALALSLLNPHVYLDTVVLLGAIGGRYAMPANVAFAGGAMCASILWFSLLGFGARLL
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EPVFARPVAWRVLDALIGAVMWAIALTLLMGG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]