| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is gltI [H]
Identifier: 17544803
GI number: 17544803
Start: 97383
End: 98288
Strand: Direct
Name: gltI [H]
Synonym: RSc0084
Alternate gene names: 17544803
Gene position: 97383-98288 (Clockwise)
Preceding gene: 17544802
Following gene: 17544808
Centisome position: 2.62
GC content: 63.69
Gene sequence:
>906_bases ATGCGTTTCACCCTTCGCTGTATCCCGCTCGCGCTGGCCGGCGCGATCGCTGCGTCCGTCCTGCCCGCGCAGGCCGAGGC GCTCGACGGCACGCTCAAGAAGATCCAGGACAGCAACACCATCCTGATCGGCGTGCGCGAATCGTCGATTCCGTTTTCGT ATCGCGACAGCAAGAACCAGATCATCGGCTTCTCGGCCGACCTGTGCTCGCGCGTGATCGATGCGGTCAAGCAGAAGGTC GGCAAGCCGGACCTGCAGGTGCAGCAGATTCCCGTCACCTCGCAGAACCGCACGGCGCTGGTGCAGAACGGCTCGGTGGA CCTGGAGTGCGGCGTGACCACGCACCTGAAGTCGCGCGAGCAGCAGACGGCGTTCTCGACCACCTTCTTCATTGCCGCCA CGCGCCTGCTGACCAGCACGCATTCGGGGGTGAAGGACTTCCCGGATCTGGCCGGCAAGTCGGTCATCACCAATGCCGGC ACCACGTCGGAGCGCATCCTGCGCAAGATGAACGACGAGAAGAAGATGAACATGAACGTCATCAGCGGCAAGGACTACGG CGAGTCTTTCCTGACGCTGCAGAGCGGCCGCGTGCAGGCCTTCATGATGGATGACGTGCTGCTGGCCGGCGCGCGCACGC TGGCGCAGAAGCCGGCCGACTGGGTCGTGACCGGCACGCCGCAGTCGTTCGAGGCCTACGGCTTCATGCTGCGCAAGGAT GATCCCCAGTTCAAGAAGCTGGTGGACGACACCCTTACCGGCGTCATGAAACGCGGCGAGATCAGCACGCTGTATGCCAA GTGGTTCGAGAAGCCGGTGCCGCCCAAGGGCGTCAACTTCGGCTTCCCGATGAGCGAGCAGCTCAAGGCGCTGTACACCA GTCCGAACGACACGCCGTTCGAGTAG
Upstream 100 bases:
>100_bases CCTGCGCACGTGGTTTGCCCGCTAGCGCACGTACCGCTTTCTCACCTCGATCCCATCCCTTAGACGGCACAAGCCGCGCC ACGCAACCATTGGAGGAATC
Downstream 100 bases:
>100_bases GCATCAGAGGCCGGCCTGCGCGACGGCCTCGATGCGGGCCACGTGCACGGCCTGCTTGATGTGCGCGGGGTTGTCGGCGT AGCGCTTGGCGACGGCGCCG
Product: amino-acid-binding periplasmic (PBP) ABC transporter protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRFTLRCIPLALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLCSRVIDAVKQKV GKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAFSTTFFIAATRLLTSTHSGVKDFPDLAGKSVITNAG TTSERILRKMNDEKKMNMNVISGKDYGESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRKD DPQFKKLVDDTLTGVMKRGEISTLYAKWFEKPVPPKGVNFGFPMSEQLKALYTSPNDTPFE
Sequences:
>Translated_301_residues MRFTLRCIPLALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLCSRVIDAVKQKV GKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAFSTTFFIAATRLLTSTHSGVKDFPDLAGKSVITNAG TTSERILRKMNDEKKMNMNVISGKDYGESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRKD DPQFKKLVDDTLTGVMKRGEISTLYAKWFEKPVPPKGVNFGFPMSEQLKALYTSPNDTPFE >Mature_301_residues MRFTLRCIPLALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQIIGFSADLCSRVIDAVKQKV GKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSREQQTAFSTTFFIAATRLLTSTHSGVKDFPDLAGKSVITNAG TTSERILRKMNDEKKMNMNVISGKDYGESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRKD DPQFKKLVDDTLTGVMKRGEISTLYAKWFEKPVPPKGVNFGFPMSEQLKALYTSPNDTPFE
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=267, Percent_Identity=54.3071161048689, Blast_Score=321, Evalue=5e-89, Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=24.5283018867925, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33056; Mature: 33056
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFTLRCIPLALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQ CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC IIGFSADLCSRVIDAVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE EEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCEEEEECCHHHHHHHH QQTAFSTTFFIAATRLLTSTHSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCHHHHHHHHHCCCHHCCEEE ISGKDYGESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRKD ECCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHEEEEECC DPQFKKLVDDTLTGVMKRGEISTLYAKWFEKPVPPKGVNFGFPMSEQLKALYTSPNDTPF CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC E C >Mature Secondary Structure MRFTLRCIPLALAGAIAASVLPAQAEALDGTLKKIQDSNTILIGVRESSIPFSYRDSKNQ CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC IIGFSADLCSRVIDAVKQKVGKPDLQVQQIPVTSQNRTALVQNGSVDLECGVTTHLKSRE EEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCEEEEECCHHHHHHHH QQTAFSTTFFIAATRLLTSTHSGVKDFPDLAGKSVITNAGTTSERILRKMNDEKKMNMNV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCHHHHHHHHHCCCHHCCEEE ISGKDYGESFLTLQSGRVQAFMMDDVLLAGARTLAQKPADWVVTGTPQSFEAYGFMLRKD ECCCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHEEEEECC DPQFKKLVDDTLTGVMKRGEISTLYAKWFEKPVPPKGVNFGFPMSEQLKALYTSPNDTPF CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]