Click here to switch to the map view.

The map label for this gene is ygfA [C]

Identifier: 17544808

GI number: 17544808

Start: 103618

End: 104223

Strand: Direct

Name: ygfA [C]

Synonym: RSc0089

Alternate gene names: 17544808

Gene position: 103618-104223 (Clockwise)

Preceding gene: 17544803

Following gene: 17544815

Centisome position: 2.79

GC content: 72.44

Gene sequence:

>606_bases
ATGCCATCCTTCGGCAACCCGCACGATCCGGCCCACCCGACCACACCGGTCGAATCGCGCCGCGCCCTGCGCGCCATGCT
GCTGCACGCGCGCGCCGCGCTGCCGGACCGGGTCGCGCACGACGGCGCGCTGGCCCGCCACCTGGGCGGGCTGCTGCATG
CCCTGCCCGTCCGGTGCCTGGCGGCCTACTGGCCCACGCAGGGCGAGTTCGACGCGCTCGGCGTGCTGGGTCACTGGCTG
GCGGCCGACACGGCGCGCCGCGCGCTGCTGCCCGTGGTGACTGACAAGTTTTCACCGCTGCAGTTTCGGCGCTGGACGCC
CGATTGCGAAATGGCGCCGGGCGCCTACGGCATCCCCATCCCCCGCGCGGGCGAGGCTGAGACGCCCGATGCCCTGCTGG
TGCCGTGCGTGGGCTTCGATGCGCACCGCTATCGTATCGGCTACGGCGGTGGCTTCTACGACCGCACGCTGGCCGCGCTG
CATGCTGCGGGGCACCGGCCGCGCACCATCGGCATCGCCTTTGAAGCCAACCGGCTGGAGTCGATCGCGCCGCAGCCGCA
CGATATCGCGCTCGACTGCATCGTGACCGAGCACGGCGTGTTCTGA

Upstream 100 bases:

>100_bases
CCGATCACGCCCGCGAAAGCCAGCGCCACCGCGCGATATACTGCCTTGCCCTTCACTGTCATTTCCTGCCCCATCACCGT
TACGGTGCGCTGATTATCCC

Downstream 100 bases:

>100_bases
CGCGCGGCCGCAAGCCCGCCTGGGACGGCCGGTTCTTCCCCCATCCGGATCGTTGCGTGGTGATGCGCGCGGGTGTCGCG
GTACTGGCGGATCAGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: 5-Formyltetrahydrofolate Cyclo-Ligase Family Protein; 5 10-Methenyltetrahydrofolate Synthetase; 5-Formyltetrahydrofolate Cyclo-Ligase Protein; Carbon-Nitrogen Ligase; Antifreeze Protein

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPSFGNPHDPAHPTTPVESRRALRAMLLHARAALPDRVAHDGALARHLGGLLHALPVRCLAAYWPTQGEFDALGVLGHWL
AADTARRALLPVVTDKFSPLQFRRWTPDCEMAPGAYGIPIPRAGEAETPDALLVPCVGFDAHRYRIGYGGGFYDRTLAAL
HAAGHRPRTIGIAFEANRLESIAPQPHDIALDCIVTEHGVF

Sequences:

>Translated_201_residues
MPSFGNPHDPAHPTTPVESRRALRAMLLHARAALPDRVAHDGALARHLGGLLHALPVRCLAAYWPTQGEFDALGVLGHWL
AADTARRALLPVVTDKFSPLQFRRWTPDCEMAPGAYGIPIPRAGEAETPDALLVPCVGFDAHRYRIGYGGGFYDRTLAAL
HAAGHRPRTIGIAFEANRLESIAPQPHDIALDCIVTEHGVF
>Mature_200_residues
PSFGNPHDPAHPTTPVESRRALRAMLLHARAALPDRVAHDGALARHLGGLLHALPVRCLAAYWPTQGEFDALGVLGHWLA
ADTARRALLPVVTDKFSPLQFRRWTPDCEMAPGAYGIPIPRAGEAETPDALLVPCVGFDAHRYRIGYGGGFYDRTLAALH
AAGHRPRTIGIAFEANRLESIAPQPHDIALDCIVTEHGVF

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21809; Mature: 21678

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFGNPHDPAHPTTPVESRRALRAMLLHARAALPDRVAHDGALARHLGGLLHALPVRCL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAYWPTQGEFDALGVLGHWLAADTARRALLPVVTDKFSPLQFRRWTPDCEMAPGAYGIPI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
PRAGEAETPDALLVPCVGFDAHRYRIGYGGGFYDRTLAALHAAGHRPRTIGIAFEANRLE
CCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHH
SIAPQPHDIALDCIVTEHGVF
HCCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
PSFGNPHDPAHPTTPVESRRALRAMLLHARAALPDRVAHDGALARHLGGLLHALPVRCL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAYWPTQGEFDALGVLGHWLAADTARRALLPVVTDKFSPLQFRRWTPDCEMAPGAYGIPI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
PRAGEAETPDALLVPCVGFDAHRYRIGYGGGFYDRTLAALHAAGHRPRTIGIAFEANRLE
CCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHH
SIAPQPHDIALDCIVTEHGVF
HCCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA