Click here to switch to the map view.

The map label for this gene is 17544802

Identifier: 17544802

GI number: 17544802

Start: 96462

End: 97307

Strand: Direct

Name: 17544802

Synonym: RSc0083

Alternate gene names: NA

Gene position: 96462-97307 (Clockwise)

Preceding gene: 17544801

Following gene: 17544803

Centisome position: 2.6

GC content: 73.88

Gene sequence:

>846_bases
ATGACGCTGCCGCTGTCCATCGCCGTCGCGCCCAACGGTGCGCGCAAGACCCACGCCGACCATCCCGCGCTGCCGATCAC
GCCGGACGAGCTGGCCGCCTGCGCCCGCCGGTGCGTCGATGCCGGCGCGGCGATGCTGCATCTGCATGTGCGCCGCGCCG
ACGGCACGCACAGCCTGGAGCCCGACGACTACCGCCCGGCCATCGCCCGCGTGAAGCAGGCGGTGGGTGATGCGCTGGTA
ATCCAGATCACCACCGAGGCGGTCGGCATCTACGGCCCCGCGCAGCAGATGGCGTCGGTGCGCGCGCTGCGGCCGGAGGC
GATTTCCGCTGCGCTGCGCGAACTGGTGCCGAATGACGTGAATGCGGCCGCGCACGAGGCCGAGGCAGCGCGCTTCTTCG
CCGAGCTGGCCGCGGCGCGCACGGCCATCCAGTACATCCTCTATTCCGACGACGACGTGGTGCGCTACCGCGACCTGCGC
GCGCGCGGCGTGCTGCCCGATGCGCCGCACTGGGTGCTGTTCGTGCTCGGCCGCTACAGCGCGGGGCAGCGCTCCGAGCC
GGCCGACCTGCTGCCCTTCCTGCGCGCCTGGGCCGACGGCGGCGACCTCACTGCCGGCGTGCCGTGGGCCATGTGCGCCT
TCGGGCCGCGCGAGGCCGATTGCGCGCTGGCCGCCGCGCTGCTGGGCGGCCACGTTCGGCTCGGCTTCGAGAACAACATG
GCGTTGCCCGACGGCAGCCCCGCGCCCGACAACGCCGCGCTCGTGGCCCACTTCCGCCGCCATACCGATGCGCTGCACCG
GCCGCTCGCCAGCGCGGCCGACCTGCGCACGTGGTTTGCCCGCTAG

Upstream 100 bases:

>100_bases
TGGCGCCGCCGTTCATCGCCACCGCGCAGGACATCGACGCGATCGTCGCGCGCCTGGGCGACGCGGTCGAGGCGGCCACC
GCCAACGCGCTGGAGGCGGC

Downstream 100 bases:

>100_bases
CGCACGTACCGCTTTCTCACCTCGATCCCATCCCTTAGACGGCACAAGCCGCGCCACGCAACCATTGGAGGAATCATGCG
TTTCACCCTTCGCTGTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTLPLSIAVAPNGARKTHADHPALPITPDELAACARRCVDAGAAMLHLHVRRADGTHSLEPDDYRPAIARVKQAVGDALV
IQITTEAVGIYGPAQQMASVRALRPEAISAALRELVPNDVNAAAHEAEAARFFAELAAARTAIQYILYSDDDVVRYRDLR
ARGVLPDAPHWVLFVLGRYSAGQRSEPADLLPFLRAWADGGDLTAGVPWAMCAFGPREADCALAAALLGGHVRLGFENNM
ALPDGSPAPDNAALVAHFRRHTDALHRPLASAADLRTWFAR

Sequences:

>Translated_281_residues
MTLPLSIAVAPNGARKTHADHPALPITPDELAACARRCVDAGAAMLHLHVRRADGTHSLEPDDYRPAIARVKQAVGDALV
IQITTEAVGIYGPAQQMASVRALRPEAISAALRELVPNDVNAAAHEAEAARFFAELAAARTAIQYILYSDDDVVRYRDLR
ARGVLPDAPHWVLFVLGRYSAGQRSEPADLLPFLRAWADGGDLTAGVPWAMCAFGPREADCALAAALLGGHVRLGFENNM
ALPDGSPAPDNAALVAHFRRHTDALHRPLASAADLRTWFAR
>Mature_280_residues
TLPLSIAVAPNGARKTHADHPALPITPDELAACARRCVDAGAAMLHLHVRRADGTHSLEPDDYRPAIARVKQAVGDALVI
QITTEAVGIYGPAQQMASVRALRPEAISAALRELVPNDVNAAAHEAEAARFFAELAAARTAIQYILYSDDDVVRYRDLRA
RGVLPDAPHWVLFVLGRYSAGQRSEPADLLPFLRAWADGGDLTAGVPWAMCAFGPREADCALAAALLGGHVRLGFENNMA
LPDGSPAPDNAALVAHFRRHTDALHRPLASAADLRTWFAR

Specific function: Unknown

COG id: COG3246

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30132; Mature: 30000

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPLSIAVAPNGARKTHADHPALPITPDELAACARRCVDAGAAMLHLHVRRADGTHSLE
CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEEEEECCCCCCCC
PDDYRPAIARVKQAVGDALVIQITTEAVGIYGPAQQMASVRALRPEAISAALRELVPNDV
CCCCCHHHHHHHHHHCCEEEEEEECCHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
NAAAHEAEAARFFAELAAARTAIQYILYSDDDVVRYRDLRARGVLPDAPHWVLFVLGRYS
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHCCCCCCCCCEEEHEECCCC
AGQRSEPADLLPFLRAWADGGDLTAGVPWAMCAFGPREADCALAAALLGGHVRLGFENNM
CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCC
ALPDGSPAPDNAALVAHFRRHTDALHRPLASAADLRTWFAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLPLSIAVAPNGARKTHADHPALPITPDELAACARRCVDAGAAMLHLHVRRADGTHSLE
CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEEEEECCCCCCCC
PDDYRPAIARVKQAVGDALVIQITTEAVGIYGPAQQMASVRALRPEAISAALRELVPNDV
CCCCCHHHHHHHHHHCCEEEEEEECCHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
NAAAHEAEAARFFAELAAARTAIQYILYSDDDVVRYRDLRARGVLPDAPHWVLFVLGRYS
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHCCCCCCCCCEEEHEECCCC
AGQRSEPADLLPFLRAWADGGDLTAGVPWAMCAFGPREADCALAAALLGGHVRLGFENNM
CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCC
ALPDGSPAPDNAALVAHFRRHTDALHRPLASAADLRTWFAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA