| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17544786
Identifier: 17544786
GI number: 17544786
Start: 76940
End: 77329
Strand: Reverse
Name: 17544786
Synonym: RSc0067
Alternate gene names: NA
Gene position: 77329-76940 (Counterclockwise)
Preceding gene: 17544787
Following gene: 17544785
Centisome position: 2.08
GC content: 70.0
Gene sequence:
>390_bases ATGCCGCTGCTCTCCCCCGACACCGACGCCGACGCACTGCATGCCCGCATCCGCGCGGGTGACCTGCTGGTCGCCTGCCT GTGCGCGGAGTGGTGCGGCACCTGCCGCAGCTACCGCGCCACCTTCGCGAACCTGGCCGCACGCTATCCGCAGCACTGCT TCGTCTGGGTGGATGTCGAGGACCACGCTGACGCGCTGGGCGATCTCGACGTCGAGAACTTCCCGACGCTGCTGGTCCAG CGCGGCCGGGAGAACGGCCGGGTGTTGTTTTTCGGTCCGGTGCTGCCGCACGCGGGTGTGGTCGAGGGGCTGCTGTCGCG CGACCTGGCGTCGGCCCAAGCGGTGCCCGTGGCGCCGGATTTGCGTGGCTGGTTATTGCACGCGGCTTGA
Upstream 100 bases:
>100_bases CTGGAGCTGGCAGGCCACATCGAGCGCCAACCGGGCGGACGCTTTCTGCGGCTGCCATAGCACCTGTCTACAATAGGGCG ACCTTTTTGCCGACCGCCCC
Downstream 100 bases:
>100_bases CGCAGGGCTCTTGACAAATACAAGAGATGTAAGCGCCGCTCTATTGCGCCTGCCAAGGAACCGCGCTTATGATTGGCGGC CGAATTCTGGGCAGCCGCCC
Product: thioredoxin-like protein
Products: NA
Alternate protein names: Thioredoxin-Like Protein; Thioredoxin; Thioredoxin Domain-Containing Protein; Thioredoxin Protein; Thiol-Disulfide Isomerase And Thioredoxins; Thioredoxin Domain; Thiol-Disulfide Isomerase And Thioredoxins Family Protein; Thioredoxin-Disulfide Reductase
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPLLSPDTDADALHARIRAGDLLVACLCAEWCGTCRSYRATFANLAARYPQHCFVWVDVEDHADALGDLDVENFPTLLVQ RGRENGRVLFFGPVLPHAGVVEGLLSRDLASAQAVPVAPDLRGWLLHAA
Sequences:
>Translated_129_residues MPLLSPDTDADALHARIRAGDLLVACLCAEWCGTCRSYRATFANLAARYPQHCFVWVDVEDHADALGDLDVENFPTLLVQ RGRENGRVLFFGPVLPHAGVVEGLLSRDLASAQAVPVAPDLRGWLLHAA >Mature_128_residues PLLSPDTDADALHARIRAGDLLVACLCAEWCGTCRSYRATFANLAARYPQHCFVWVDVEDHADALGDLDVENFPTLLVQR GRENGRVLFFGPVLPHAGVVEGLLSRDLASAQAVPVAPDLRGWLLHAA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14018; Mature: 13887
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLSPDTDADALHARIRAGDLLVACLCAEWCGTCRSYRATFANLAARYPQHCFVWVDVE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC DHADALGDLDVENFPTLLVQRGRENGRVLFFGPVLPHAGVVEGLLSRDLASAQAVPVAPD HHHHHHCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC LRGWLLHAA CCHHEEECC >Mature Secondary Structure PLLSPDTDADALHARIRAGDLLVACLCAEWCGTCRSYRATFANLAARYPQHCFVWVDVE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC DHADALGDLDVENFPTLLVQRGRENGRVLFFGPVLPHAGVVEGLLSRDLASAQAVPVAPD HHHHHHCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC LRGWLLHAA CCHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA