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The map label for this gene is ykwD [H]

Identifier: 17232110

GI number: 17232110

Start: 5520499

End: 5521113

Strand: Reverse

Name: ykwD [H]

Synonym: all4618

Alternate gene names: 17232110

Gene position: 5521113-5520499 (Counterclockwise)

Preceding gene: 17232112

Following gene: 17232109

Centisome position: 86.08

GC content: 45.85

Gene sequence:

>615_bases
GTGAAATTACTATACAAATATAAAAATATGTTACTCAAAAATATTTGGGTAATGTGGGGTGCCATGGGCTACGCCCTACC
GTTGGCGATCGCCTTATTATCCACAGGCTGTGAGCAGGTAATTGAATCTTTGCCACCTCTGCCAACGGTTGAAATACCAT
CAAATCAACCACTAAAGCCTCAAATTCCTGTAGAATCTGCCACCTCTGCCCAAATTGAAGCAGCCGTCCGCCAAGGAATC
AACCAAGTACGTCAAAAAAACGGGTTACAACCTTTACAAAATAACGTCAAATTAGCGCAGGTTGCCCGTCAATACAGCAG
ACAAATGGCAGAGAAGAAATTCTTTAGTCATACTGGCGCGGATGGCAGCACCCCAGCAGATAGAGTCCGTGCTGGTGGTA
TTTCTTATTGGGTAGTCGGTGAAAATCTATACACAAGCACAAATATTCCTCGTCCTGTACCGTCAGCGATTGAAGGGTGG
ATGAAAAGCCCTGGACATCGAGAAAATATTCTCCGCCCCGTATTTGCGGAGACAGGTGTAGGAGTGTGGCGAATAGGCAA
CACCTACTATATTACTCAGTTATTCTTGCGGCGATCGCCCCTTGGGTGGCCTTAA

Upstream 100 bases:

>100_bases
ATGTTATGCAAAAATTGTCTAAAGTATAAATATTGGAACACTAGAAATTAATTAAACTGTTACGCACAGAGCAGTAAAAA
TACTGTTTAAGGAAGAATAA

Downstream 100 bases:

>100_bases
ATTAGGATCACAACTCCTTATAATATGCAGCGATCGCCAATAATTGTCTAAACTGCAAGTAGACCATTATTTTAGAAAAA
CCTTGTGAAAGCGAGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKLLYKYKNMLLKNIWVMWGAMGYALPLAIALLSTGCEQVIESLPPLPTVEIPSNQPLKPQIPVESATSAQIEAAVRQGI
NQVRQKNGLQPLQNNVKLAQVARQYSRQMAEKKFFSHTGADGSTPADRVRAGGISYWVVGENLYTSTNIPRPVPSAIEGW
MKSPGHRENILRPVFAETGVGVWRIGNTYYITQLFLRRSPLGWP

Sequences:

>Translated_204_residues
MKLLYKYKNMLLKNIWVMWGAMGYALPLAIALLSTGCEQVIESLPPLPTVEIPSNQPLKPQIPVESATSAQIEAAVRQGI
NQVRQKNGLQPLQNNVKLAQVARQYSRQMAEKKFFSHTGADGSTPADRVRAGGISYWVVGENLYTSTNIPRPVPSAIEGW
MKSPGHRENILRPVFAETGVGVWRIGNTYYITQLFLRRSPLGWP
>Mature_204_residues
MKLLYKYKNMLLKNIWVMWGAMGYALPLAIALLSTGCEQVIESLPPLPTVEIPSNQPLKPQIPVESATSAQIEAAVRQGI
NQVRQKNGLQPLQNNVKLAQVARQYSRQMAEKKFFSHTGADGSTPADRVRAGGISYWVVGENLYTSTNIPRPVPSAIEGW
MKSPGHRENILRPVFAETGVGVWRIGNTYYITQLFLRRSPLGWP

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 22745; Mature: 22745

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLYKYKNMLLKNIWVMWGAMGYALPLAIALLSTGCEQVIESLPPLPTVEIPSNQPLKP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
QIPVESATSAQIEAAVRQGINQVRQKNGLQPLQNNVKLAQVARQYSRQMAEKKFFSHTGA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGSTPADRVRAGGISYWVVGENLYTSTNIPRPVPSAIEGWMKSPGHRENILRPVFAETGV
CCCCCHHHHHHCCEEEEEECCCEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCC
GVWRIGNTYYITQLFLRRSPLGWP
CEEEECCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLLYKYKNMLLKNIWVMWGAMGYALPLAIALLSTGCEQVIESLPPLPTVEIPSNQPLKP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
QIPVESATSAQIEAAVRQGINQVRQKNGLQPLQNNVKLAQVARQYSRQMAEKKFFSHTGA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGSTPADRVRAGGISYWVVGENLYTSTNIPRPVPSAIEGWMKSPGHRENILRPVFAETGV
CCCCCHHHHHHCCEEEEEECCCEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCC
GVWRIGNTYYITQLFLRRSPLGWP
CEEEECCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]