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The map label for this gene is 17232109

Identifier: 17232109

GI number: 17232109

Start: 5519938

End: 5520414

Strand: Reverse

Name: 17232109

Synonym: all4617

Alternate gene names: NA

Gene position: 5520414-5519938 (Counterclockwise)

Preceding gene: 17232110

Following gene: 17232107

Centisome position: 86.07

GC content: 45.28

Gene sequence:

>477_bases
GTGAAAGCGAGATGGATCATCACAGCAGTTTCAGCAGCATTGTTTTTTGGTGGTAGCCTGTTTACATCGCTGCGTGACCC
CTGGTTTCAAAACTTACAACGTCCCGACTGGCTGACCTTTGAATTTATCATCCCGTTTGTTTGGACTTTCATTTGGGCTT
GTACAACCATTTCTGCAATTATTGTTTGGGAAAAAAGGACAAGACAGGGCTTTCGACCTTGGTATTTGATGGCTATTTAT
GCAGCGATCGCCATTTCTACCTCTGCGTATAGTCCTATTGTAGTAGAACTGCGGAGCCTCACAGGGGGAATAATTATGGG
TGGCTTGGCAACGCTACTAGTGTATATTTTAGCCTTCGTAGTCAAGCCCATTTCCCCAAAAGCCTCTTGGCTATTCCTTC
CCTACGCCCTCTGGGGGCCATTTGGTACTTATCTAACTTGGTTATTACTCCAACTAAATCCCGGTGTAGCAAGTTAG

Upstream 100 bases:

>100_bases
CCTTGGGTGGCCTTAAATTAGGATCACAACTCCTTATAATATGCAGCGATCGCCAATAATTGTCTAAACTGCAAGTAGAC
CATTATTTTAGAAAAACCTT

Downstream 100 bases:

>100_bases
CCTATTTCTACAAATCTTAAGTATTATAGCATGATTCTTGGTATAGTACTTTACGTAATCGAGTATAATCATAAAGGGTT
TCCACCGCCCGCATCGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: TspO/MBR Family; TspO/MBR Family Protein; TspO And MBR Family Protein; TspO And MBR Like Proteins

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKARWIITAVSAALFFGGSLFTSLRDPWFQNLQRPDWLTFEFIIPFVWTFIWACTTISAIIVWEKRTRQGFRPWYLMAIY
AAIAISTSAYSPIVVELRSLTGGIIMGGLATLLVYILAFVVKPISPKASWLFLPYALWGPFGTYLTWLLLQLNPGVAS

Sequences:

>Translated_158_residues
MKARWIITAVSAALFFGGSLFTSLRDPWFQNLQRPDWLTFEFIIPFVWTFIWACTTISAIIVWEKRTRQGFRPWYLMAIY
AAIAISTSAYSPIVVELRSLTGGIIMGGLATLLVYILAFVVKPISPKASWLFLPYALWGPFGTYLTWLLLQLNPGVAS
>Mature_158_residues
MKARWIITAVSAALFFGGSLFTSLRDPWFQNLQRPDWLTFEFIIPFVWTFIWACTTISAIIVWEKRTRQGFRPWYLMAIY
AAIAISTSAYSPIVVELRSLTGGIIMGGLATLLVYILAFVVKPISPKASWLFLPYALWGPFGTYLTWLLLQLNPGVAS

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17902; Mature: 17902

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARWIITAVSAALFFGGSLFTSLRDPWFQNLQRPDWLTFEFIIPFVWTFIWACTTISAI
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVWEKRTRQGFRPWYLMAIYAAIAISTSAYSPIVVELRSLTGGIIMGGLATLLVYILAFV
HEECHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
VKPISPKASWLFLPYALWGPFGTYLTWLLLQLNPGVAS
HCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKARWIITAVSAALFFGGSLFTSLRDPWFQNLQRPDWLTFEFIIPFVWTFIWACTTISAI
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVWEKRTRQGFRPWYLMAIYAAIAISTSAYSPIVVELRSLTGGIIMGGLATLLVYILAFV
HEECHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
VKPISPKASWLFLPYALWGPFGTYLTWLLLQLNPGVAS
HCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA