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The map label for this gene is pucC [H]

Identifier: 17231954

GI number: 17231954

Start: 5346458

End: 5347909

Strand: Reverse

Name: pucC [H]

Synonym: all4462

Alternate gene names: 17231954

Gene position: 5347909-5346458 (Counterclockwise)

Preceding gene: 17231955

Following gene: 17231953

Centisome position: 83.38

GC content: 44.7

Gene sequence:

>1452_bases
GTGAAAGTCATAATGGCAACTAGCAATTTTGTACCCGATCCCGAATCAGGTCAATCAATCAAGCCGGAATCAGTCAAGAG
GGTTGACTTACTGACTGTGTTTCGACTCGGACTCTTTCAAATGGGTCTGGGTATGATGTCAATTTTGACTCTGGGTGTAC
TCAACAGAGTCATGATTAAAGAAATCGGAATTCCGGCGACATGGGTAGCAGTCGTTGTGGCCTTACCGTTGTTCGTCGCT
CCTGCTCGTATCTGGTTCGGTCAGCTTTCGGATGCCAAGCCTTTGTGGGGTTATCATCGCACAGTTTATGTTTGGGTAGG
GGCGGCAATATTTGCGATCGCCTCTTTTTTAGCTGTTCAAGTAATTTGGCAGTTAAATAATGTCGCCAATAGCTCTACTG
GTTGGGTGTGGACTACGCAAACTATCGGCTGGATGGCTGTTCTGGCTTTAGTTTTTGCCGTATACGGTCTAGCAATTTGT
GCTAGTAGTACACCTTTTGCTGCTTTGTTAGTGGATATCTCTCAAGAAGATAACCGTTCTCAAGTGGTTGGTGTAGTTTG
GTCAATGTTGATGGTGGGAATTATTGTTGGGGCAATTATCTCTGGCACTATATTACCGTCAGAAGAAACTACGGTAAATT
TCCAACCAGCAGTTAACAATCTATTTATGATTGTGCCAACTATTGTATTTGGGCTGTCAATTGTAGCAACGCTTGGTGTA
GAGAAAAAATATTCTCTTTATAGCCAGCGTTCCACTCTGGTAAACCGAGAAGATAGCATTACATTGGGTTCGGCTTGGAA
AATTTTGACCGCTAGTCCCCAAACTGTGTTGTTCTTCACTTTTTTAGTAGTGATGACCATCAGTTTATTTATGCAAGACG
CAGTGGTAGAACCTTATGCCGGTGAAGTGTTTAAGATGTCCATAGCACAGAGTACCCGACTGAATGCTTTTTATGGTACG
GGTATTTTGATTGCCTATGGTGTAGCTGGCTTTTTTGTCGTCCCCCGTTTGGGTAAGCGTCGCACTACACGTCTGGGCTG
TGTGCTGGTCGCATTCGCAGCATTATTGTTGGGTGCGTCAGGATTCTCGGCTAATCCCGCCTTCTTAAAGTTCGGTTTGG
TATTGTTTGGTTTAGCCGCCGGTTTTTTAACTACAGGCGCAATTAGCTTGATGCTGGATTTGACAGTTGCAGAAGCCGCA
GGCACATTTATTGGGGCTTGGGGACTGGCGCAGGCTTTCGCTAGGGGAACGGCTGTAGTCACAGGTGGTGCAGCCTTGGA
TATAGGGAAAAGATTTTTACCAACTTTAGAATTAGCTTATGGGTTTGTGTTCGTTCTGGAAGCTGTGGGAATGATAGTGT
CGATTTGGTTCCTGAACCGAGTTAGCGTGAAGGAATTTCAAACTACCACCAAGAAAGCGATCGCTTCTGTTTTAGAAAGT
GATTTAGATTAG

Upstream 100 bases:

>100_bases
CCCCGTAATTTCCTTAATTTTGAATTTTGAATTTTGAATTTTGAATTGTTCTCAGGGTTTATCTTAAGTTAAAGAAAGGC
TAAATCCTGTATTGTTTTTC

Downstream 100 bases:

>100_bases
AACGTGAGAACTTATTGATGAATGATTTTTGGACGACAATTCTCGATTTTGCCCAAACTACCACCACCAGAGTGGGCGCG
CGATTAATGCAGGACTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MKVIMATSNFVPDPESGQSIKPESVKRVDLLTVFRLGLFQMGLGMMSILTLGVLNRVMIKEIGIPATWVAVVVALPLFVA
PARIWFGQLSDAKPLWGYHRTVYVWVGAAIFAIASFLAVQVIWQLNNVANSSTGWVWTTQTIGWMAVLALVFAVYGLAIC
ASSTPFAALLVDISQEDNRSQVVGVVWSMLMVGIIVGAIISGTILPSEETTVNFQPAVNNLFMIVPTIVFGLSIVATLGV
EKKYSLYSQRSTLVNREDSITLGSAWKILTASPQTVLFFTFLVVMTISLFMQDAVVEPYAGEVFKMSIAQSTRLNAFYGT
GILIAYGVAGFFVVPRLGKRRTTRLGCVLVAFAALLLGASGFSANPAFLKFGLVLFGLAAGFLTTGAISLMLDLTVAEAA
GTFIGAWGLAQAFARGTAVVTGGAALDIGKRFLPTLELAYGFVFVLEAVGMIVSIWFLNRVSVKEFQTTTKKAIASVLES
DLD

Sequences:

>Translated_483_residues
MKVIMATSNFVPDPESGQSIKPESVKRVDLLTVFRLGLFQMGLGMMSILTLGVLNRVMIKEIGIPATWVAVVVALPLFVA
PARIWFGQLSDAKPLWGYHRTVYVWVGAAIFAIASFLAVQVIWQLNNVANSSTGWVWTTQTIGWMAVLALVFAVYGLAIC
ASSTPFAALLVDISQEDNRSQVVGVVWSMLMVGIIVGAIISGTILPSEETTVNFQPAVNNLFMIVPTIVFGLSIVATLGV
EKKYSLYSQRSTLVNREDSITLGSAWKILTASPQTVLFFTFLVVMTISLFMQDAVVEPYAGEVFKMSIAQSTRLNAFYGT
GILIAYGVAGFFVVPRLGKRRTTRLGCVLVAFAALLLGASGFSANPAFLKFGLVLFGLAAGFLTTGAISLMLDLTVAEAA
GTFIGAWGLAQAFARGTAVVTGGAALDIGKRFLPTLELAYGFVFVLEAVGMIVSIWFLNRVSVKEFQTTTKKAIASVLES
DLD
>Mature_483_residues
MKVIMATSNFVPDPESGQSIKPESVKRVDLLTVFRLGLFQMGLGMMSILTLGVLNRVMIKEIGIPATWVAVVVALPLFVA
PARIWFGQLSDAKPLWGYHRTVYVWVGAAIFAIASFLAVQVIWQLNNVANSSTGWVWTTQTIGWMAVLALVFAVYGLAIC
ASSTPFAALLVDISQEDNRSQVVGVVWSMLMVGIIVGAIISGTILPSEETTVNFQPAVNNLFMIVPTIVFGLSIVATLGV
EKKYSLYSQRSTLVNREDSITLGSAWKILTASPQTVLFFTFLVVMTISLFMQDAVVEPYAGEVFKMSIAQSTRLNAFYGT
GILIAYGVAGFFVVPRLGKRRTTRLGCVLVAFAALLLGASGFSANPAFLKFGLVLFGLAAGFLTTGAISLMLDLTVAEAA
GTFIGAWGLAQAFARGTAVVTGGAALDIGKRFLPTLELAYGFVFVLEAVGMIVSIWFLNRVSVKEFQTTTKKAIASVLES
DLD

Specific function: PucC is required for high-level transcription of the puc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR004896 [H]

Pfam domain/function: PF03209 PUCC [H]

EC number: NA

Molecular weight: Translated: 51884; Mature: 51884

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIMATSNFVPDPESGQSIKPESVKRVDLLTVFRLGLFQMGLGMMSILTLGVLNRVMIK
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGIPATWVAVVVALPLFVAPARIWFGQLSDAKPLWGYHRTVYVWVGAAIFAIASFLAVQ
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VIWQLNNVANSSTGWVWTTQTIGWMAVLALVFAVYGLAICASSTPFAALLVDISQEDNRS
HHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH
QVVGVVWSMLMVGIIVGAIISGTILPSEETTVNFQPAVNNLFMIVPTIVFGLSIVATLGV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
EKKYSLYSQRSTLVNREDSITLGSAWKILTASPQTVLFFTFLVVMTISLFMQDAVVEPYA
CHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GEVFKMSIAQSTRLNAFYGTGILIAYGVAGFFVVPRLGKRRTTRLGCVLVAFAALLLGAS
CCCEEEHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
GFSANPAFLKFGLVLFGLAAGFLTTGAISLMLDLTVAEAAGTFIGAWGLAQAFARGTAVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
TGGAALDIGKRFLPTLELAYGFVFVLEAVGMIVSIWFLNRVSVKEFQTTTKKAIASVLES
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DLD
CCC
>Mature Secondary Structure
MKVIMATSNFVPDPESGQSIKPESVKRVDLLTVFRLGLFQMGLGMMSILTLGVLNRVMIK
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGIPATWVAVVVALPLFVAPARIWFGQLSDAKPLWGYHRTVYVWVGAAIFAIASFLAVQ
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VIWQLNNVANSSTGWVWTTQTIGWMAVLALVFAVYGLAICASSTPFAALLVDISQEDNRS
HHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH
QVVGVVWSMLMVGIIVGAIISGTILPSEETTVNFQPAVNNLFMIVPTIVFGLSIVATLGV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
EKKYSLYSQRSTLVNREDSITLGSAWKILTASPQTVLFFTFLVVMTISLFMQDAVVEPYA
CHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GEVFKMSIAQSTRLNAFYGTGILIAYGVAGFFVVPRLGKRRTTRLGCVLVAFAALLLGAS
CCCEEEHHHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
GFSANPAFLKFGLVLFGLAAGFLTTGAISLMLDLTVAEAAGTFIGAWGLAQAFARGTAVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
TGGAALDIGKRFLPTLELAYGFVFVLEAVGMIVSIWFLNRVSVKEFQTTTKKAIASVLES
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DLD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9130598 [H]