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The map label for this gene is yebC [C]

Identifier: 17231768

GI number: 17231768

Start: 5128544

End: 5129302

Strand: Reverse

Name: yebC [C]

Synonym: all4276

Alternate gene names: 17231768

Gene position: 5129302-5128544 (Counterclockwise)

Preceding gene: 17231771

Following gene: 17231766

Centisome position: 79.97

GC content: 44.8

Gene sequence:

>759_bases
ATGGCAGGACATAGTAAATGGGCAAATATTAAGCGCCAAAAAGCGGTAGTAGATGCCAAGAAGGGAAAGACCTTTACTCA
GCTATCTAGGGCAATTATTCTGGCGGCTAGAAGCGGGGTTCCAGACCCATCCGGAAATTTTCAACTCCGTACCGCCATCG
ATAAAGCAAAAGCGGCTGGTATTCCTAACGATAATATAGAACGGGCGATCGCTAAAGGTGCAGGTACTTTTGGTGGCGAT
AACGCTAGTTTAGAAGAAATTCGTTACGAAGGTTATGGGCCTGGGGGTGTAGCTATCTTAATTGAAGCTTTGACCGATAA
CCGCAATCGCACGGCTGCTGACTTGCGAGTAGCTTTTAGTAAAAATGGTGGTAATTTGGGTGAAACTGGCTGTGTTAGCT
GGATGTTTGATCAAAAAGGTGTCTGTGTTGTCTCTGGTGTAGTGGATGAAGACCAGCTTTTAGAAGCATCCTTAGAGGGT
GGTGCTGAATCTTATGAAATGACAGAAGATGAGACAGCCGAGGTGTTTACAGAAGTAGCAAATTTAGAAATTCTCAACCA
GACACTCAAAGACCAAGGCTTTAAGGTGACAGATGCCGAGTTGCGCTGGATTCCCAGTAATCATTTAGAAGTTACTGAAC
CAGACCAGGCGCGATCGCTGCTCAAATTAATTGATACTCTAGAGGGGTTAGATGATGTCCAGAATGTGACATCCAATTTT
GAAATGTCCGAAAATCTCATGGCGGTGAGTTTCGCCTAG

Upstream 100 bases:

>100_bases
TCAATTTTTTAACTTTCATGGACAGAGTGAGGGACTATTGACTAATGACTATTGACCATTAACCATTAACTTTGGAAAAG
AGATTTATCAGCTTTAGATT

Downstream 100 bases:

>100_bases
ATAAATATCTCAAAATATCTCATCGCTGGGGAAGTTAGGTAAGAAAAATTTGATACCTCACTCCTTAAGAAGATGATTTT
GCTGCGGCTTGTTTGACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAGHSKWANIKRQKAVVDAKKGKTFTQLSRAIILAARSGVPDPSGNFQLRTAIDKAKAAGIPNDNIERAIAKGAGTFGGD
NASLEEIRYEGYGPGGVAILIEALTDNRNRTAADLRVAFSKNGGNLGETGCVSWMFDQKGVCVVSGVVDEDQLLEASLEG
GAESYEMTEDETAEVFTEVANLEILNQTLKDQGFKVTDAELRWIPSNHLEVTEPDQARSLLKLIDTLEGLDDVQNVTSNF
EMSENLMAVSFA

Sequences:

>Translated_252_residues
MAGHSKWANIKRQKAVVDAKKGKTFTQLSRAIILAARSGVPDPSGNFQLRTAIDKAKAAGIPNDNIERAIAKGAGTFGGD
NASLEEIRYEGYGPGGVAILIEALTDNRNRTAADLRVAFSKNGGNLGETGCVSWMFDQKGVCVVSGVVDEDQLLEASLEG
GAESYEMTEDETAEVFTEVANLEILNQTLKDQGFKVTDAELRWIPSNHLEVTEPDQARSLLKLIDTLEGLDDVQNVTSNF
EMSENLMAVSFA
>Mature_251_residues
AGHSKWANIKRQKAVVDAKKGKTFTQLSRAIILAARSGVPDPSGNFQLRTAIDKAKAAGIPNDNIERAIAKGAGTFGGDN
ASLEEIRYEGYGPGGVAILIEALTDNRNRTAADLRVAFSKNGGNLGETGCVSWMFDQKGVCVVSGVVDEDQLLEASLEGG
AESYEMTEDETAEVFTEVANLEILNQTLKDQGFKVTDAELRWIPSNHLEVTEPDQARSLLKLIDTLEGLDDVQNVTSNFE
MSENLMAVSFA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=252, Percent_Identity=31.7460317460317, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=46.7741935483871, Blast_Score=214, Evalue=5e-57,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=38.9830508474576, Blast_Score=146, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=26.8292682926829, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=35.361216730038, Blast_Score=119, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=26.2948207171315, Blast_Score=81, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 27155; Mature: 27023

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKRQKAVVDAKKGKTFTQLSRAIILAARSGVPDPSGNFQLRTAIDKAKAAG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCC
IPNDNIERAIAKGAGTFGGDNASLEEIRYEGYGPGGVAILIEALTDNRNRTAADLRVAFS
CCCHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCHHEEEEEHHCCCCCEEEEEEEEEE
KNGGNLGETGCVSWMFDQKGVCVVSGVVDEDQLLEASLEGGAESYEMTEDETAEVFTEVA
CCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
NLEILNQTLKDQGFKVTDAELRWIPSNHLEVTEPDQARSLLKLIDTLEGLDDVQNVTSNF
HHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
EMSENLMAVSFA
CCCCCEEEEEEC
>Mature Secondary Structure 
AGHSKWANIKRQKAVVDAKKGKTFTQLSRAIILAARSGVPDPSGNFQLRTAIDKAKAAG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCC
IPNDNIERAIAKGAGTFGGDNASLEEIRYEGYGPGGVAILIEALTDNRNRTAADLRVAFS
CCCHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCHHEEEEEHHCCCCCEEEEEEEEEE
KNGGNLGETGCVSWMFDQKGVCVVSGVVDEDQLLEASLEGGAESYEMTEDETAEVFTEVA
CCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
NLEILNQTLKDQGFKVTDAELRWIPSNHLEVTEPDQARSLLKLIDTLEGLDDVQNVTSNF
HHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
EMSENLMAVSFA
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA