| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231650
Identifier: 17231650
GI number: 17231650
Start: 5003292
End: 5004620
Strand: Direct
Name: 17231650
Synonym: alr4158
Alternate gene names: NA
Gene position: 5003292-5004620 (Clockwise)
Preceding gene: 17231649
Following gene: 17231653
Centisome position: 78.01
GC content: 41.38
Gene sequence:
>1329_bases ATGAAAATGGTACAAACTCCAGAAAAACCTACTACCAAAATCCCTCCATCTCAGCATGAATTTGCTGATATAATTTATCG CCTAGAAGCAGGCGGTTCGATGTTGCCAGATACGCCCGAAAACCTAATGCAAATCATCGGCATATATAAGGCTTATGCTG TACCGATGGATTTTTACTGGCGTGACCTACTTTATATTGCTGAACAGGTATTTTTAAATCCATTTCCCTTTTTTAAATAC TTCATTTCCCAAGAATATTTAGATTTACATAATCATTATGCTGGTGATGATGCTGATTTAAGAATTTGGCGTGGTGTCGC TACAGCCCATCCAGAACTTTTGGCATTTATGGAGAAGGGTGAAACCTTCAAAATGCCAAAACTATTGCATCATTTGTTGC ACGATCGCATTAACATGGAATTTGCTGAAGCTTGTATGCAGGCTATGCTTTGGCACCGTAAGATGTATGCGCCAGTTAAT CAATTTGATGCTTATTTAGACTCAGAAGAATATAAAGCTAACGCTGATAGAGCAATTAAAGCTTATTTTCAAGGCAACCC AGTCATGTTGGGGCTTTATAAGCTGTTCCCTGATATGTTCTTGGAACAGTGCCGCCAGATGTCCTACTACTCTAACCTGG GTTTATTCTGGGAAGTCATGGCCCCGGTGTTCTTTGAAATGTCGGATATCTACGATGAAGGTGGCTTCAAGGGTGTCCCA GATGCGATGAACTTTTTGGTGAATGGCATATTTGCGATCGCAGGCCGGCCGATTTACCATCATGTATATATCCGTGGTGA ATGCTACGAAATCATTCCTAAATCCAAAGGTTTCACCTGGCTATACGAAGCTGCATTACCCTATGTAGAAGCCGTTTTCT ATCGCACAGCCCCATTCCGTGGGACTAAATCTTACAACGCCCAAGCTGGTCAAGTACCTGCTGACCAAAAAGACTTCCAC TACGGTATTCTCTACGCTGACGTATTTCCTGTAGGAACTGCGGGTATTCCTCCCACATTACTCATGCAAGATATGTTGCA CTTCCTACCACAATATCTTGTTGATTACTACAAAAAATATTGTCGTGGGGAAGAAGATATGTTGATTCAGTTAGGAATTA CTTTCCAACGTTCAATGTACAACGTTACCTCTGCCGTAATTCAAGCATTAAGAACTGCACTTTTATATCCTTTAGACGAT CCTAATCCCAAACACTTGCAAGCCAACCGTGATTTTTTTGAAGCACAGCTAAATCGTTTTACTCGCTCAGAATATGGTAT GCGTGACGCTGCTCGTCTGCGGAGTATTCAAGATCAAGATTATCGATAG
Upstream 100 bases:
>100_bases TTCTTCCTAACAGAATTTTGCATTTTGAGTTCAAAAAAGGTCAACCAGAGAATTACTTAAAACCCAAATCTGACTAAGCA ACCTTCTTGAAGATGAGGAA
Downstream 100 bases:
>100_bases AATATTAACCCAGCAACTGCAATTTCATCATCCAAATCCCTGGCTTTTCTATTTAGCATTAATTGTTGTAGAGACGTTGT ATAAAACGTCTCTACTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: CO2 Hydration Protein ChpX; CO2-Hydration Protein; Carbon Dioxide Hydration Protein; CO2 Hydration; High Affinity CO2 Uptake Protein; Low Affinity CO2 Uptake Protein; Uptake
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MKMVQTPEKPTTKIPPSQHEFADIIYRLEAGGSMLPDTPENLMQIIGIYKAYAVPMDFYWRDLLYIAEQVFLNPFPFFKY FISQEYLDLHNHYAGDDADLRIWRGVATAHPELLAFMEKGETFKMPKLLHHLLHDRINMEFAEACMQAMLWHRKMYAPVN QFDAYLDSEEYKANADRAIKAYFQGNPVMLGLYKLFPDMFLEQCRQMSYYSNLGLFWEVMAPVFFEMSDIYDEGGFKGVP DAMNFLVNGIFAIAGRPIYHHVYIRGECYEIIPKSKGFTWLYEAALPYVEAVFYRTAPFRGTKSYNAQAGQVPADQKDFH YGILYADVFPVGTAGIPPTLLMQDMLHFLPQYLVDYYKKYCRGEEDMLIQLGITFQRSMYNVTSAVIQALRTALLYPLDD PNPKHLQANRDFFEAQLNRFTRSEYGMRDAARLRSIQDQDYR
Sequences:
>Translated_442_residues MKMVQTPEKPTTKIPPSQHEFADIIYRLEAGGSMLPDTPENLMQIIGIYKAYAVPMDFYWRDLLYIAEQVFLNPFPFFKY FISQEYLDLHNHYAGDDADLRIWRGVATAHPELLAFMEKGETFKMPKLLHHLLHDRINMEFAEACMQAMLWHRKMYAPVN QFDAYLDSEEYKANADRAIKAYFQGNPVMLGLYKLFPDMFLEQCRQMSYYSNLGLFWEVMAPVFFEMSDIYDEGGFKGVP DAMNFLVNGIFAIAGRPIYHHVYIRGECYEIIPKSKGFTWLYEAALPYVEAVFYRTAPFRGTKSYNAQAGQVPADQKDFH YGILYADVFPVGTAGIPPTLLMQDMLHFLPQYLVDYYKKYCRGEEDMLIQLGITFQRSMYNVTSAVIQALRTALLYPLDD PNPKHLQANRDFFEAQLNRFTRSEYGMRDAARLRSIQDQDYR >Mature_442_residues MKMVQTPEKPTTKIPPSQHEFADIIYRLEAGGSMLPDTPENLMQIIGIYKAYAVPMDFYWRDLLYIAEQVFLNPFPFFKY FISQEYLDLHNHYAGDDADLRIWRGVATAHPELLAFMEKGETFKMPKLLHHLLHDRINMEFAEACMQAMLWHRKMYAPVN QFDAYLDSEEYKANADRAIKAYFQGNPVMLGLYKLFPDMFLEQCRQMSYYSNLGLFWEVMAPVFFEMSDIYDEGGFKGVP DAMNFLVNGIFAIAGRPIYHHVYIRGECYEIIPKSKGFTWLYEAALPYVEAVFYRTAPFRGTKSYNAQAGQVPADQKDFH YGILYADVFPVGTAGIPPTLLMQDMLHFLPQYLVDYYKKYCRGEEDMLIQLGITFQRSMYNVTSAVIQALRTALLYPLDD PNPKHLQANRDFFEAQLNRFTRSEYGMRDAARLRSIQDQDYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51560; Mature: 51560
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMVQTPEKPTTKIPPSQHEFADIIYRLEAGGSMLPDTPENLMQIIGIYKAYAVPMDFYW CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH RDLLYIAEQVFLNPFPFFKYFISQEYLDLHNHYAGDDADLRIWRGVATAHPELLAFMEKG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHHHHHCC ETFKMPKLLHHLLHDRINMEFAEACMQAMLWHRKMYAPVNQFDAYLDSEEYKANADRAIK CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCHHHHHH AYFQGNPVMLGLYKLFPDMFLEQCRQMSYYSNLGLFWEVMAPVFFEMSDIYDEGGFKGVP HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DAMNFLVNGIFAIAGRPIYHHVYIRGECYEIIPKSKGFTWLYEAALPYVEAVFYRTAPFR HHHHHHHHHHHHHCCCCEEEEEEEECCHHEECCCCCCCEEHHHHHHHHHHHHHHHCCCCC GTKSYNAQAGQVPADQKDFHYGILYADVFPVGTAGIPPTLLMQDMLHFLPQYLVDYYKKY CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH CRGEEDMLIQLGITFQRSMYNVTSAVIQALRTALLYPLDDPNPKHLQANRDFFEAQLNRF HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH TRSEYGMRDAARLRSIQDQDYR HHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKMVQTPEKPTTKIPPSQHEFADIIYRLEAGGSMLPDTPENLMQIIGIYKAYAVPMDFYW CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH RDLLYIAEQVFLNPFPFFKYFISQEYLDLHNHYAGDDADLRIWRGVATAHPELLAFMEKG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHHHHHCC ETFKMPKLLHHLLHDRINMEFAEACMQAMLWHRKMYAPVNQFDAYLDSEEYKANADRAIK CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCHHHHHH AYFQGNPVMLGLYKLFPDMFLEQCRQMSYYSNLGLFWEVMAPVFFEMSDIYDEGGFKGVP HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC DAMNFLVNGIFAIAGRPIYHHVYIRGECYEIIPKSKGFTWLYEAALPYVEAVFYRTAPFR HHHHHHHHHHHHHCCCCEEEEEEEECCHHEECCCCCCCEEHHHHHHHHHHHHHHHCCCCC GTKSYNAQAGQVPADQKDFHYGILYADVFPVGTAGIPPTLLMQDMLHFLPQYLVDYYKKY CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH CRGEEDMLIQLGITFQRSMYNVTSAVIQALRTALLYPLDDPNPKHLQANRDFFEAQLNRF HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH TRSEYGMRDAARLRSIQDQDYR HHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA