| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231610
Identifier: 17231610
GI number: 17231610
Start: 4960898
End: 4961437
Strand: Reverse
Name: 17231610
Synonym: all4118
Alternate gene names: NA
Gene position: 4961437-4960898 (Counterclockwise)
Preceding gene: 17231612
Following gene: 17231609
Centisome position: 77.36
GC content: 40.56
Gene sequence:
>540_bases ATGAGACGTAAATCTACTGGTAGATCAACTACTACATCTAAATCTCCTGGTTTCCAACCCTCCATATTTAACTTTGCCAC TATTGCTATTTTGGGGGGAGTTCTTGTATTAGGAATTGGAATTGGTATTGCTTTTAGCTCTACAACCACCTTATCTTCAT CAAATGTTGCCTCTCGTGAATTTATCGACACGAAAGCACCAAATCCAGAGATTTGCGTCCAGTATGGGGCTAGTGCAATG GTAATGGATGCTAGATTATTTGTGACTCTTAATCCGTTCAATGTCTATGTTGCTCAACCTAGTATGCGGCCTGGATGTGT TCTGCGGCAAAATAACTGGGCGCTTTTGGAACAACGTAAACTTGTCACATCCGATCAAGTTAGAGAATGTAAGAATCGTC TCAACACCTTTGGCTTTACAGGTAATTTAGACAGCGAAAAACCTGATATTAGGTGTATTTACCAAAATGAGTCTGCCCAA AACTTCTTTATGTCTCAACCAGGAGCCGTCGCACCATCTCAGGAAACAGAAAGATTTTAA
Upstream 100 bases:
>100_bases CAGCAAACAGTTATTAACATTCTCTTGCATTGATAACTTGTAACTTATTACTGTTAGAACAACTCCCGACTTTTTCAGGT ATGAAGGTTATAAAGCAAGA
Downstream 100 bases:
>100_bases TGAATTAGAACTGGTAATGGGTAATAGCTAAGAGGTTGTTGGAAAATTCTTTATTGGCAAATATCAATGACAGTTTGGCT GACGCTTTTGGCGAAAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MRRKSTGRSTTTSKSPGFQPSIFNFATIAILGGVLVLGIGIGIAFSSTTTLSSSNVASREFIDTKAPNPEICVQYGASAM VMDARLFVTLNPFNVYVAQPSMRPGCVLRQNNWALLEQRKLVTSDQVRECKNRLNTFGFTGNLDSEKPDIRCIYQNESAQ NFFMSQPGAVAPSQETERF
Sequences:
>Translated_179_residues MRRKSTGRSTTTSKSPGFQPSIFNFATIAILGGVLVLGIGIGIAFSSTTTLSSSNVASREFIDTKAPNPEICVQYGASAM VMDARLFVTLNPFNVYVAQPSMRPGCVLRQNNWALLEQRKLVTSDQVRECKNRLNTFGFTGNLDSEKPDIRCIYQNESAQ NFFMSQPGAVAPSQETERF >Mature_179_residues MRRKSTGRSTTTSKSPGFQPSIFNFATIAILGGVLVLGIGIGIAFSSTTTLSSSNVASREFIDTKAPNPEICVQYGASAM VMDARLFVTLNPFNVYVAQPSMRPGCVLRQNNWALLEQRKLVTSDQVRECKNRLNTFGFTGNLDSEKPDIRCIYQNESAQ NFFMSQPGAVAPSQETERF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19673; Mature: 19673
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRKSTGRSTTTSKSPGFQPSIFNFATIAILGGVLVLGIGIGIAFSSTTTLSSSNVASRE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCEECCCCCCCCHH FIDTKAPNPEICVQYGASAMVMDARLFVTLNPFNVYVAQPSMRPGCVLRQNNWALLEQRK HHCCCCCCHHEEEEECCCEEEEEEEEEEEECCCEEEEECCCCCCCEEEECCCCEEEHHHH LVTSDQVRECKNRLNTFGFTGNLDSEKPDIRCIYQNESAQNFFMSQPGAVAPSQETERF CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRKSTGRSTTTSKSPGFQPSIFNFATIAILGGVLVLGIGIGIAFSSTTTLSSSNVASRE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCEECCCCCCCCHH FIDTKAPNPEICVQYGASAMVMDARLFVTLNPFNVYVAQPSMRPGCVLRQNNWALLEQRK HHCCCCCCHHEEEEECCCEEEEEEEEEEEECCCEEEEECCCCCCCEEEECCCCEEEHHHH LVTSDQVRECKNRLNTFGFTGNLDSEKPDIRCIYQNESAQNFFMSQPGAVAPSQETERF CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA