| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231609
Identifier: 17231609
GI number: 17231609
Start: 4959447
End: 4960682
Strand: Reverse
Name: 17231609
Synonym: all4117
Alternate gene names: NA
Gene position: 4960682-4959447 (Counterclockwise)
Preceding gene: 17231610
Following gene: 17231608
Centisome position: 77.34
GC content: 41.26
Gene sequence:
>1236_bases ATGCCAAATCGTCGTTATCCCTCTCCATACTGGCGCTATCTCAGAGCTAGGTTATTAAATTTGGGCAAACCTAGTTTTTG GGGAACAGCAATTTTCCTATGTGTCGTAGGGCTAGTTATTCAGCAATACTGGGCTAACCCCGATGTATCAACTAGCAATC CAGCAACTCAGAATCCTGCGGCAAATGCTGATGACCCCTCTCTGTCTGAAGAGGATAAAGCTATTGCAGCAGATATTGAT AATTTGCAGTCCTTGTTTGCTGAAACTGAGCCAATCATTACACCAACAACGATAGCTAAATCGCAGGAGAATAAAAATAA AACTCCAGTACCTAATACAGCCAACAAAACACAGTCTATTGATACTCCTAAACCAAATTCAGGGGCCAATTTAGTTAACG GTCAATTACCTACAACTGTCGGAAAAAGTATCTTTGTGTCAGAAGCAGAAAATTTATTGCGGTTTGGTGCAACAGATAAT AATCAGTTGTTGGGATACAAAGTGGGGAATGGTTCCACTGCACCCATAAGAGAAACTGCTAATCCTTCTATATTCAGTCC AGGGTTGGTTAATCAAATCAACGGTAGGCAGAACATTAACTCAAGTACTGTATTACCAACAGGACTGAACCAATCGCCTA ATCAAACCGTGCCTAGTTTAAATAATAACCCTTCAGCCGTCATCAACCCTACAGGCGTACCTTCCTATGGTGGAGTGATG CAGTCTTTTCCCAGCAGCACTCAACCTAGTCCAACGTTTTCACCTAGCACGGGTTTAAATCCTGGCTCAAATTATACACA ACCAAGTTCTTACAATAACTTAAATAACGGTCAGGCTGTTCCACTAAATACGAGGTTAAATTCGGGAACGGGTTACATTC AGCCACTTCCTTATAATAACTTGAACAACAATCAGCCGATCGCACCTAATACAGGAGTCAGTTCAGGAACAGGTTATATT CAGCAAACTTTACCGAACCCCTCCCATAATTTAAATTATCTTCAAAATTTACCAAACCAAAATCAATCAACATCAAGCGT CCTGACTGGAACATCACCGATTATTGGCCCCTATCGCGTGCGAAATCCTCGCACTAACGTTAACACAACCACAAATCCAG TAATTCCTGGTAATTACGGCAATTCACAACTACCCCAATCTAATTTTCCTAATAATGGCTTGCCTCAGGGGCAGAATATC AACGGGATTCAAAATAATGGTTACTCTTATCCTTGA
Upstream 100 bases:
>100_bases GACTGCAACACCTACACTTTAAATAGGTAGGTAGGAATAAATCATACAATCCTAAGTATAAATAATATAAAACTGTAAAT AAGTTATCTAGCAAAAATAT
Downstream 100 bases:
>100_bases AAGGACTTACCCACCCAGGTTGTCTGTTGAGACGGGTATAAGGGGATAAGGGTAGGATTTTAAACATTTACCTCCTATGT CTTTGTGCAAACCCTTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPNRRYPSPYWRYLRARLLNLGKPSFWGTAIFLCVVGLVIQQYWANPDVSTSNPATQNPAANADDPSLSEEDKAIAADID NLQSLFAETEPIITPTTIAKSQENKNKTPVPNTANKTQSIDTPKPNSGANLVNGQLPTTVGKSIFVSEAENLLRFGATDN NQLLGYKVGNGSTAPIRETANPSIFSPGLVNQINGRQNINSSTVLPTGLNQSPNQTVPSLNNNPSAVINPTGVPSYGGVM QSFPSSTQPSPTFSPSTGLNPGSNYTQPSSYNNLNNGQAVPLNTRLNSGTGYIQPLPYNNLNNNQPIAPNTGVSSGTGYI QQTLPNPSHNLNYLQNLPNQNQSTSSVLTGTSPIIGPYRVRNPRTNVNTTTNPVIPGNYGNSQLPQSNFPNNGLPQGQNI NGIQNNGYSYP
Sequences:
>Translated_411_residues MPNRRYPSPYWRYLRARLLNLGKPSFWGTAIFLCVVGLVIQQYWANPDVSTSNPATQNPAANADDPSLSEEDKAIAADID NLQSLFAETEPIITPTTIAKSQENKNKTPVPNTANKTQSIDTPKPNSGANLVNGQLPTTVGKSIFVSEAENLLRFGATDN NQLLGYKVGNGSTAPIRETANPSIFSPGLVNQINGRQNINSSTVLPTGLNQSPNQTVPSLNNNPSAVINPTGVPSYGGVM QSFPSSTQPSPTFSPSTGLNPGSNYTQPSSYNNLNNGQAVPLNTRLNSGTGYIQPLPYNNLNNNQPIAPNTGVSSGTGYI QQTLPNPSHNLNYLQNLPNQNQSTSSVLTGTSPIIGPYRVRNPRTNVNTTTNPVIPGNYGNSQLPQSNFPNNGLPQGQNI NGIQNNGYSYP >Mature_410_residues PNRRYPSPYWRYLRARLLNLGKPSFWGTAIFLCVVGLVIQQYWANPDVSTSNPATQNPAANADDPSLSEEDKAIAADIDN LQSLFAETEPIITPTTIAKSQENKNKTPVPNTANKTQSIDTPKPNSGANLVNGQLPTTVGKSIFVSEAENLLRFGATDNN QLLGYKVGNGSTAPIRETANPSIFSPGLVNQINGRQNINSSTVLPTGLNQSPNQTVPSLNNNPSAVINPTGVPSYGGVMQ SFPSSTQPSPTFSPSTGLNPGSNYTQPSSYNNLNNGQAVPLNTRLNSGTGYIQPLPYNNLNNNQPIAPNTGVSSGTGYIQ QTLPNPSHNLNYLQNLPNQNQSTSSVLTGTSPIIGPYRVRNPRTNVNTTTNPVIPGNYGNSQLPQSNFPNNGLPQGQNIN GIQNNGYSYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43944; Mature: 43813
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRRYPSPYWRYLRARLLNLGKPSFWGTAIFLCVVGLVIQQYWANPDVSTSNPATQNPA CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ANADDPSLSEEDKAIAADIDNLQSLFAETEPIITPTTIAKSQENKNKTPVPNTANKTQSI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC DTPKPNSGANLVNGQLPTTVGKSIFVSEAENLLRFGATDNNQLLGYKVGNGSTAPIRETA CCCCCCCCCCEECCCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC NPSIFSPGLVNQINGRQNINSSTVLPTGLNQSPNQTVPSLNNNPSAVINPTGVPSYGGVM CCCCCCCCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHH QSFPSSTQPSPTFSPSTGLNPGSNYTQPSSYNNLNNGQAVPLNTRLNSGTGYIQPLPYNN HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCC LNNNQPIAPNTGVSSGTGYIQQTLPNPSHNLNYLQNLPNQNQSTSSVLTGTSPIIGPYRV CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCHHEECCCCCCCCCEEE RNPRTNVNTTTNPVIPGNYGNSQLPQSNFPNNGLPQGQNINGIQNNGYSYP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PNRRYPSPYWRYLRARLLNLGKPSFWGTAIFLCVVGLVIQQYWANPDVSTSNPATQNPA CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ANADDPSLSEEDKAIAADIDNLQSLFAETEPIITPTTIAKSQENKNKTPVPNTANKTQSI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC DTPKPNSGANLVNGQLPTTVGKSIFVSEAENLLRFGATDNNQLLGYKVGNGSTAPIRETA CCCCCCCCCCEECCCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC NPSIFSPGLVNQINGRQNINSSTVLPTGLNQSPNQTVPSLNNNPSAVINPTGVPSYGGVM CCCCCCCCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHH QSFPSSTQPSPTFSPSTGLNPGSNYTQPSSYNNLNNGQAVPLNTRLNSGTGYIQPLPYNN HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCC LNNNQPIAPNTGVSSGTGYIQQTLPNPSHNLNYLQNLPNQNQSTSSVLTGTSPIIGPYRV CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCHHEECCCCCCCCCEEE RNPRTNVNTTTNPVIPGNYGNSQLPQSNFPNNGLPQGQNINGIQNNGYSYP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA