| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231418
Identifier: 17231418
GI number: 17231418
Start: 4738226
End: 4739554
Strand: Direct
Name: 17231418
Synonym: alr3926
Alternate gene names: NA
Gene position: 4738226-4739554 (Clockwise)
Preceding gene: 17231417
Following gene: 17231422
Centisome position: 73.88
GC content: 36.79
Gene sequence:
>1329_bases ATGCTGTTTGAATTTATCTCTACTATTAAAGCGGGCATTGACTCTGGTCAATACTTGGAAATATTGAGTAATGGGATACC CATTGGTATAGTACGTGATACTACAAGTGGAAGTTTTCTTGCTTATGCGGTTGGTGCTATAGCTAGTAATCATCCTTTAC TACCACTAACTGTACCTATTCAGTTCCTAATCCCCGGAGTAAATATGGTACAGGATTACATAGCTTTTCCACAAAGTTAT CAGCAAAGTAGTTCTCTACAAACTGTATTAAAATCACTTCAAACAAATATAAGCGTTCTGCAAGCAACTATAGCCTTGAT TGAATTAGGTAAAATACCGAGTGTCGCATTAGAAGCAGTCAACTTACGCCAGACACTCAAGCTTAAAAAAGAAGTTGAAG AAATGCAACTTGAACTTAAAAACGGCTTTATTGATTTGCAAAAAGCTCTCAAAGCTCAAGGAGCAGAAGTTAGACAAATA GTCAAAGAAGTAGTCCATGATATTAATTTTGAACAACATTGTACAGTTTTAGGACGTGCCTATAGCCTGTTTATGCAGGC GTGTAATCGGTTACAATCAGCGATGGAATCACCAGATATCAGTCAAAGAAAGTCCGAAATTGATAGTGCAAGAGAAATGT TCCTTGAGGTTTTAGCCGATTACATTAATCCTCAAATATTGGAAAAAGTCTCCGCGCCGGGACAACTTCGCAGATTTGAA TGTGCTTGGGCAATTGAACAAGCAATTGTTATCACATACCAAGTACAGAATCAGGTGGCATTTGTTAGCGATCGCCTCTG CCATCTCCGCGATAAAATTAAAGAACACATCTGTACAGTGATTAACAATTGTGAAACCTACGATGAGCTGAATTTTCTGT TTCCCGAAATAAGTCGCGTTTGTAAACATGATTTACCTATTTTGGAAGTATGGCAAGCACGAGTTGATTGGCTCAGGTCA CTTTCGCCAGTGGAGATAAAACTTTTAGCAAAAAACAATTGCAACGATTCTGAACTTGCAGATACTTTAGTTACTAATCA AACTAAAATTGTGTTATCAGTACCACCCGAACAATTAGTATATGAAGATTTAGCAGAAAAATCCCATTTTTACTCTCTGC TTGATCAGATGATATTTATGTTTAAGCCTGTTTTACGTCAGGAGTACGAAGTTTATATCAATCAACAAGCTCAAGCGGCG GGTCATAAGATATTAATTCCCAAAAACCTACAACAAGTCTCTGATATGACTGTTGCAAATCTTTATTACTATTTTAAGGT AAGAGATGAATCTAATATAGAAGAAACTCTAGAGGCAATAACAGCATAA
Upstream 100 bases:
>100_bases TTAGTAATTATTTTATTTGTGATCACAGTTTTTTACTGTCTGGTTGCTTCTTCAGGGTTTTTCGGTTCAGGTGCAACATC TACCTTTCATAAAGTAAAAT
Downstream 100 bases:
>100_bases TCTCTCTAAAAAATTTAGGGCTTGTTGGCAAGTAAATTAATCAAGCCGTTAGTATAAGTACAAATTAGACGTACAACATT GCTGATTTTTTGGCGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPIQFLIPGVNMVQDYIAFPQSY QQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAVNLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQI VKEVVHDINFEQHCTVLGRAYSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRVCKHDLPILEVWQARVDWLRS LSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLVYEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAA GHKILIPKNLQQVSDMTVANLYYYFKVRDESNIEETLEAITA
Sequences:
>Translated_442_residues MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPIQFLIPGVNMVQDYIAFPQSY QQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAVNLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQI VKEVVHDINFEQHCTVLGRAYSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRVCKHDLPILEVWQARVDWLRS LSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLVYEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAA GHKILIPKNLQQVSDMTVANLYYYFKVRDESNIEETLEAITA >Mature_442_residues MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPIQFLIPGVNMVQDYIAFPQSY QQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAVNLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQI VKEVVHDINFEQHCTVLGRAYSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRVCKHDLPILEVWQARVDWLRS LSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLVYEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAA GHKILIPKNLQQVSDMTVANLYYYFKVRDESNIEETLEAITA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50117; Mature: 50117
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPI CHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCH QFLIPGVNMVQDYIAFPQSYQQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAV HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQIVKEVVHDINFEQHCTVLGRA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH YSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHH CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRV HHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH CKHDLPILEVWQARVDWLRSLSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLV HHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHH YEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAAGHKILIPKNLQQVSDMTVAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCHHHHHHHHHHEE LYYYFKVRDESNIEETLEAITA EEEEEEECCCCCHHHHHHHHCC >Mature Secondary Structure MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPI CHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCH QFLIPGVNMVQDYIAFPQSYQQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAV HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQIVKEVVHDINFEQHCTVLGRA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH YSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHH CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRV HHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH CKHDLPILEVWQARVDWLRSLSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLV HHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHH YEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAAGHKILIPKNLQQVSDMTVAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCHHHHHHHHHHEE LYYYFKVRDESNIEETLEAITA EEEEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA