| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231422
Identifier: 17231422
GI number: 17231422
Start: 4745625
End: 4746311
Strand: Direct
Name: 17231422
Synonym: alr3930
Alternate gene names: NA
Gene position: 4745625-4746311 (Clockwise)
Preceding gene: 17231418
Following gene: 17231423
Centisome position: 73.99
GC content: 34.21
Gene sequence:
>687_bases ATGAGTGATATCACAATGTTAATGACAGGGCTATTGATGACAAATCAACTGGCATCATCAAATTTGCCCAACCTATCTGT AATTCAGATAGATGCAAATAAGAAAAACTTGATAGAGAGCCAATCATATCAACTATTATCAGAGGCTCAGGCTAAGTCAT CTGATGCTATTTGGAAAAATAATGATTCATCTGGTATTTCAGCAACACCTCAATCCCATCCTCAAAAAAATAGAATAGCA AAAATAAAGAAAATGTTTGCCAAGAATTTAGGTAATTTTTCTGAATTAGATTCTTCTGCATCTTTAAAAAATAAGTTTGC TAAAAGAAAAAACTTAATAGCAAAACGACGCAGAGTTCAGTTCAATTTTACAAAATTTAAAAAGTCAAGTTTTCCTAATA GTCAAGAGTTAGCACGCAAACAACGAAATATTAATAATATTGTGATTGCCAGTTCTCAAACGTTGACGAACCCAATATCA CCTAATCTAAGTTTTAGTAATTCAGGTGTATCTGTCAGAGTATTACAACGGTTATTAGTGGCTAATGGCTATCCTATTCC AGTCGATGGGGTTTTTGGGCCAGTCACAGAAATTGCTGTAAAAGCCTTTCAGGAGCAACAAAATTTAACAGTTGATGGAA TAGTGGGAGTGCAAACATGGTACTGTCTGACTACACACAGCAAATAG
Upstream 100 bases:
>100_bases GGCTTTAATGAGTTAGTAGCTACATCAACAATTTCTGTGTCTTCACCGAAACATCTACCGATCTTTTATGTGAATAGTTG AAATTTAGGTATAAAGTCAA
Downstream 100 bases:
>100_bases CAAAGACTTTATAGAGAACACACTCAGCTGATATTTGCTTTTTTTCGCTACAGTAGTCCTGCTAGCCGCGTAAGCCTAAT TACCTAGACTAAACAACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSDITMLMTGLLMTNQLASSNLPNLSVIQIDANKKNLIESQSYQLLSEAQAKSSDAIWKNNDSSGISATPQSHPQKNRIA KIKKMFAKNLGNFSELDSSASLKNKFAKRKNLIAKRRRVQFNFTKFKKSSFPNSQELARKQRNINNIVIASSQTLTNPIS PNLSFSNSGVSVRVLQRLLVANGYPIPVDGVFGPVTEIAVKAFQEQQNLTVDGIVGVQTWYCLTTHSK
Sequences:
>Translated_228_residues MSDITMLMTGLLMTNQLASSNLPNLSVIQIDANKKNLIESQSYQLLSEAQAKSSDAIWKNNDSSGISATPQSHPQKNRIA KIKKMFAKNLGNFSELDSSASLKNKFAKRKNLIAKRRRVQFNFTKFKKSSFPNSQELARKQRNINNIVIASSQTLTNPIS PNLSFSNSGVSVRVLQRLLVANGYPIPVDGVFGPVTEIAVKAFQEQQNLTVDGIVGVQTWYCLTTHSK >Mature_227_residues SDITMLMTGLLMTNQLASSNLPNLSVIQIDANKKNLIESQSYQLLSEAQAKSSDAIWKNNDSSGISATPQSHPQKNRIAK IKKMFAKNLGNFSELDSSASLKNKFAKRKNLIAKRRRVQFNFTKFKKSSFPNSQELARKQRNINNIVIASSQTLTNPISP NLSFSNSGVSVRVLQRLLVANGYPIPVDGVFGPVTEIAVKAFQEQQNLTVDGIVGVQTWYCLTTHSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25246; Mature: 25115
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDITMLMTGLLMTNQLASSNLPNLSVIQIDANKKNLIESQSYQLLSEAQAKSSDAIWKN CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC NDSSGISATPQSHPQKNRIAKIKKMFAKNLGNFSELDSSASLKNKFAKRKNLIAKRRRVQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHC FNFTKFKKSSFPNSQELARKQRNINNIVIASSQTLTNPISPNLSFSNSGVSVRVLQRLLV CCHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHH ANGYPIPVDGVFGPVTEIAVKAFQEQQNLTVDGIVGVQTWYCLTTHSK HCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCC >Mature Secondary Structure SDITMLMTGLLMTNQLASSNLPNLSVIQIDANKKNLIESQSYQLLSEAQAKSSDAIWKN CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC NDSSGISATPQSHPQKNRIAKIKKMFAKNLGNFSELDSSASLKNKFAKRKNLIAKRRRVQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHC FNFTKFKKSSFPNSQELARKQRNINNIVIASSQTLTNPISPNLSFSNSGVSVRVLQRLLV CCHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHH ANGYPIPVDGVFGPVTEIAVKAFQEQQNLTVDGIVGVQTWYCLTTHSK HCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA