| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231417
Identifier: 17231417
GI number: 17231417
Start: 4734617
End: 4737580
Strand: Direct
Name: 17231417
Synonym: alr3925
Alternate gene names: NA
Gene position: 4734617-4737580 (Clockwise)
Preceding gene: 17231413
Following gene: 17231418
Centisome position: 73.82
GC content: 37.82
Gene sequence:
>2964_bases ATGGTGAAAAGTGGCTGGTTGCAGCGTTATAGTCATGTTACGGCTGGAGGTTGGTGGTGTTCTGGGTTAGATCCTCTCAA CAATTGGCAAGGTATGGAATGGGGGTGCTTTAAGCCAAATCAACCGCGCACGAATCAAAATGGCAAGTCTATTAAATATG AACATCCCCCCAGCACAGCAACACGGATATTCTGTCTACGAGTGACATTAGAGATATGGCGACAAGTCTCAGGGCGTTAC AATTTTCCTATCCCTGGAGATATCACAATTAATTCCCAAGGTGAAGCGGAAGGCTTTTGGCAATGGGTGATGGAACGCAA CATACCAGTCATCATTTGCGAGGGAGCCAAGAAAGCTGCAACATTATTATCTCAGGGATATGTGGCGATCGCTATTCCGG GGATTACCAGTGGTTATAGAGTTGTTAAAGATAAATTTGGTAAAGTCACTAGTCGCCAGCTAATCCCTGATTTAGCTGCA TTTACAACCATAAAGCGTACTTTTTATATCTGCTTTGATTATGAAACTCAACAGAGAAAAATAGCAGCTGTTAGTAACGC TATTTCCCAGCTTGGTTGTTTATTCCAAGCAAAAAAATGTCCTGTAAAAGTTATCGAACTTCCAGGTTTAGAAAAGGGTG TAGATGAGTTAATTGTTGCTAAAGGCGCAAGTGTTTTTGAAAAAGTTTATCGTCAAAGTGTGGATTTAGAAATTTATCTC GCTCAAATCAAACCCCACAGCGAATTAACGATTCCAGCAGCCATCACAGTAAATCGCCCATATTTAGAAGAAATCCCCTT CCCTAACTCTGGATTAGTTGGTGTCAAATCAGCGAAAGGTACAGGAAAAACGACATCGTTACAAGCGGTCGTCCAGCAAG CTAAAAGTATAAATAGACCTGTATTATTAATTACTCATAGAATTCAGTTAGGGCGTTTCCTTTGTGAAAAAATTGGTATT CAATGGGGTCTTATTAATCATGCAGAAGGTTTAACAAAAAATAGGGATTGGCTAAGAAAAATAGAGCCACAATCTGTAGG ATTATGCGTTGACTCTATCTGGAAATTACGCCCAGAAGAGTGGCAAGGGGCAATTATTATTTTAGACGAAGTTGAGCAGT CTTTGTGGCATCTCCTCAACAGTAATACTTGTAAACATAAACGCGTCAGAATTTTAAAATTATTTCAACAATTAATTTCT CTAGTTTTATCGACAGGTGGCTTAGTAATTGCCCAAGATGCTGATTTATCGGATGTATCTTTAGAATATTTACAAGGTTT ATCAGGCTGTAAAATCATACCTTGGGTATTAGTAAATCAATGGAAGCCACAACGAGGATGGGAAGTAACCTTTTATGATT CTCCTAACCCTATACCCTTAATTCAGCAGTTGGAATTAGATTTACTTGCAGGACGTAAATGTTACGTAACTACTGATAGC CGTGCTGGACGTTATAGCTGCGAAACTATTGAACGTTATCTCAAGGAACGTTTAGAAAAATTGCGATATGAGTTTCCCAA AACCCTAGTAGTGAATAGCCACACAACTAATACTCCCGGTCATGCGGCTGTCGATTTTGTTGCAGCTATTAACGAAAAAA TTACTGAATATAGTAATGTGTTTGTAACTCCTAGTTTGGGAACCGGTATTAGTATTGATGTGCAGCATTTTGACCGCGTA TATGGCATTTTCCAAGGCGTAATTCCTGATTCAGAAGCACGACAAGCATTAGCTAGAGTTAGGGATAATGTGCCAAGAAT TGTCTGGTGTGCTAAACGGGGAATTGGTTTAATTGGTAGTGGTAGTACAAATTATCGTTTACTATCTGATTGGTATCAGG AAAATCAAAAAGAAAATTTAGCTTTGCTTAGTCCATTACATAAAATAGATGTAGACTTACCCTTAGTTTATGACCCTATT CATTTACGAACATGGGCTAAATTGTCGGCAAGGGTTAATTCTTCTATTCGTCTCTATCGCCAATCGATGGAAGAGGGATT AACTACAGATGGGCATCAAATTCGCTTGCGGAGTAATGCAGTTCACAATAATATTATCCGAGATTTACGCTTGGCATTCC TCGCAACTGAGCCAGGTGATTTAAGAGAACGTCAAAGATTAGTTTTAGAAATTGTCAAAGTCCAGAAGGATTGGGTAGAG AAAAGGCAAAAGGGTAAAGAAATTAAGCGTCAGATTAAGAAAATTAAGCAGCAAAATCAAATAACCGCAGCCACTAATGT AGCCAATGCTAAAGATATTGATTATTTAGAATACGAACATCTTTCAGGCAAGCATTCTCTAACTGATGAAGAACGCCATC AAATTCAAAAATATAATCTCCACCAAAGATACGGTATCTTAGTCACTCCTTCGCTCAAGTTAAGAGATGACCAAGGATAT TACACTCAACTGTTAATTCATTACTACCTGACCCATGAAAGTGAGTACTTTCAAATCAGAGACCAAAAAGAATGGCATCA ACAATTATCCTGGGGTAATGGTAAAGTTTTTCTGCCAGATTTAAAAACGTATACTTTAGAAGTTGAGGCAATGAGAGCCT TAGGAATGCCACAATTTATTGACATAGAACGAGAATTTACTGAAAATGCCTCTGACTTAATCTGGTTGAAAGATGTGGTC TTTCAACATAGTAGGCATATTAAAAGAGTTTTGGGTCTTGACTTTATTAGATGCCAAGAAAAAATTACAGCAATCAAGGT TCTTAGCCGGTTACTCAATTTGTTGGGATTGAGATTGAAAAGAGTTAACAATATTTATCAAATTGATTTAGAGACATTTA ACGATGAGAGGCAAAACATATTTTCAGTTTGGCAACAACGAGATGAGGTCATATTAACTCAAATCAATAATATGAGACGC GAAAAATATAATTTACTCTCAAACCAAAATCCACAAGCGAAAAATACAAATTCGGTCATCTCTACTATGGTTTCCCTATT TTAG
Upstream 100 bases:
>100_bases AGAATTACACTTGTCACAGCTTAACTTTAGATCCCTCCAAGGCGTAAGCGCCTATGAGCATCTATTAATTTCCGAACACC TACCCCGTACCAACACGGGA
Downstream 100 bases:
>100_bases AGACCATTTATAAAATAAACCTTTAGACGACGCAGCATAATACAACTCACAACAGCATCACTTATTTCAGAGAGATGCTC ATAATCCTTGCTGAGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF 1; ORF943 [H]
Number of amino acids: Translated: 987; Mature: 987
Protein sequence:
>987_residues MVKSGWLQRYSHVTAGGWWCSGLDPLNNWQGMEWGCFKPNQPRTNQNGKSIKYEHPPSTATRIFCLRVTLEIWRQVSGRY NFPIPGDITINSQGEAEGFWQWVMERNIPVIICEGAKKAATLLSQGYVAIAIPGITSGYRVVKDKFGKVTSRQLIPDLAA FTTIKRTFYICFDYETQQRKIAAVSNAISQLGCLFQAKKCPVKVIELPGLEKGVDELIVAKGASVFEKVYRQSVDLEIYL AQIKPHSELTIPAAITVNRPYLEEIPFPNSGLVGVKSAKGTGKTTSLQAVVQQAKSINRPVLLITHRIQLGRFLCEKIGI QWGLINHAEGLTKNRDWLRKIEPQSVGLCVDSIWKLRPEEWQGAIIILDEVEQSLWHLLNSNTCKHKRVRILKLFQQLIS LVLSTGGLVIAQDADLSDVSLEYLQGLSGCKIIPWVLVNQWKPQRGWEVTFYDSPNPIPLIQQLELDLLAGRKCYVTTDS RAGRYSCETIERYLKERLEKLRYEFPKTLVVNSHTTNTPGHAAVDFVAAINEKITEYSNVFVTPSLGTGISIDVQHFDRV YGIFQGVIPDSEARQALARVRDNVPRIVWCAKRGIGLIGSGSTNYRLLSDWYQENQKENLALLSPLHKIDVDLPLVYDPI HLRTWAKLSARVNSSIRLYRQSMEEGLTTDGHQIRLRSNAVHNNIIRDLRLAFLATEPGDLRERQRLVLEIVKVQKDWVE KRQKGKEIKRQIKKIKQQNQITAATNVANAKDIDYLEYEHLSGKHSLTDEERHQIQKYNLHQRYGILVTPSLKLRDDQGY YTQLLIHYYLTHESEYFQIRDQKEWHQQLSWGNGKVFLPDLKTYTLEVEAMRALGMPQFIDIEREFTENASDLIWLKDVV FQHSRHIKRVLGLDFIRCQEKITAIKVLSRLLNLLGLRLKRVNNIYQIDLETFNDERQNIFSVWQQRDEVILTQINNMRR EKYNLLSNQNPQAKNTNSVISTMVSLF
Sequences:
>Translated_987_residues MVKSGWLQRYSHVTAGGWWCSGLDPLNNWQGMEWGCFKPNQPRTNQNGKSIKYEHPPSTATRIFCLRVTLEIWRQVSGRY NFPIPGDITINSQGEAEGFWQWVMERNIPVIICEGAKKAATLLSQGYVAIAIPGITSGYRVVKDKFGKVTSRQLIPDLAA FTTIKRTFYICFDYETQQRKIAAVSNAISQLGCLFQAKKCPVKVIELPGLEKGVDELIVAKGASVFEKVYRQSVDLEIYL AQIKPHSELTIPAAITVNRPYLEEIPFPNSGLVGVKSAKGTGKTTSLQAVVQQAKSINRPVLLITHRIQLGRFLCEKIGI QWGLINHAEGLTKNRDWLRKIEPQSVGLCVDSIWKLRPEEWQGAIIILDEVEQSLWHLLNSNTCKHKRVRILKLFQQLIS LVLSTGGLVIAQDADLSDVSLEYLQGLSGCKIIPWVLVNQWKPQRGWEVTFYDSPNPIPLIQQLELDLLAGRKCYVTTDS RAGRYSCETIERYLKERLEKLRYEFPKTLVVNSHTTNTPGHAAVDFVAAINEKITEYSNVFVTPSLGTGISIDVQHFDRV YGIFQGVIPDSEARQALARVRDNVPRIVWCAKRGIGLIGSGSTNYRLLSDWYQENQKENLALLSPLHKIDVDLPLVYDPI HLRTWAKLSARVNSSIRLYRQSMEEGLTTDGHQIRLRSNAVHNNIIRDLRLAFLATEPGDLRERQRLVLEIVKVQKDWVE KRQKGKEIKRQIKKIKQQNQITAATNVANAKDIDYLEYEHLSGKHSLTDEERHQIQKYNLHQRYGILVTPSLKLRDDQGY YTQLLIHYYLTHESEYFQIRDQKEWHQQLSWGNGKVFLPDLKTYTLEVEAMRALGMPQFIDIEREFTENASDLIWLKDVV FQHSRHIKRVLGLDFIRCQEKITAIKVLSRLLNLLGLRLKRVNNIYQIDLETFNDERQNIFSVWQQRDEVILTQINNMRR EKYNLLSNQNPQAKNTNSVISTMVSLF >Mature_987_residues MVKSGWLQRYSHVTAGGWWCSGLDPLNNWQGMEWGCFKPNQPRTNQNGKSIKYEHPPSTATRIFCLRVTLEIWRQVSGRY NFPIPGDITINSQGEAEGFWQWVMERNIPVIICEGAKKAATLLSQGYVAIAIPGITSGYRVVKDKFGKVTSRQLIPDLAA FTTIKRTFYICFDYETQQRKIAAVSNAISQLGCLFQAKKCPVKVIELPGLEKGVDELIVAKGASVFEKVYRQSVDLEIYL AQIKPHSELTIPAAITVNRPYLEEIPFPNSGLVGVKSAKGTGKTTSLQAVVQQAKSINRPVLLITHRIQLGRFLCEKIGI QWGLINHAEGLTKNRDWLRKIEPQSVGLCVDSIWKLRPEEWQGAIIILDEVEQSLWHLLNSNTCKHKRVRILKLFQQLIS LVLSTGGLVIAQDADLSDVSLEYLQGLSGCKIIPWVLVNQWKPQRGWEVTFYDSPNPIPLIQQLELDLLAGRKCYVTTDS RAGRYSCETIERYLKERLEKLRYEFPKTLVVNSHTTNTPGHAAVDFVAAINEKITEYSNVFVTPSLGTGISIDVQHFDRV YGIFQGVIPDSEARQALARVRDNVPRIVWCAKRGIGLIGSGSTNYRLLSDWYQENQKENLALLSPLHKIDVDLPLVYDPI HLRTWAKLSARVNSSIRLYRQSMEEGLTTDGHQIRLRSNAVHNNIIRDLRLAFLATEPGDLRERQRLVLEIVKVQKDWVE KRQKGKEIKRQIKKIKQQNQITAATNVANAKDIDYLEYEHLSGKHSLTDEERHQIQKYNLHQRYGILVTPSLKLRDDQGY YTQLLIHYYLTHESEYFQIRDQKEWHQQLSWGNGKVFLPDLKTYTLEVEAMRALGMPQFIDIEREFTENASDLIWLKDVV FQHSRHIKRVLGLDFIRCQEKITAIKVLSRLLNLLGLRLKRVNNIYQIDLETFNDERQNIFSVWQQRDEVILTQINNMRR EKYNLLSNQNPQAKNTNSVISTMVSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 113334; Mature: 113334
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSGWLQRYSHVTAGGWWCSGLDPLNNWQGMEWGCFKPNQPRTNQNGKSIKYEHPPSTA CCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHH TRIFCLRVTLEIWRQVSGRYNFPIPGDITINSQGEAEGFWQWVMERNIPVIICEGAKKAA HHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHH TLLSQGYVAIAIPGITSGYRVVKDKFGKVTSRQLIPDLAAFTTIKRTFYICFDYETQQRK HHHHCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHH IAAVSNAISQLGCLFQAKKCPVKVIELPGLEKGVDELIVAKGASVFEKVYRQSVDLEIYL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHCHHHHHHHCCHHHHHHHHHHCCCEEEEE AQIKPHSELTIPAAITVNRPYLEEIPFPNSGLVGVKSAKGTGKTTSLQAVVQQAKSINRP EEECCCCCEEEEEEEEECCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC VLLITHRIQLGRFLCEKIGIQWGLINHAEGLTKNRDWLRKIEPQSVGLCVDSIWKLRPEE EEEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHH WQGAIIILDEVEQSLWHLLNSNTCKHKRVRILKLFQQLISLVLSTGGLVIAQDADLSDVS CCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH LEYLQGLSGCKIIPWVLVNQWKPQRGWEVTFYDSPNPIPLIQQLELDLLAGRKCYVTTDS HHHHCCCCCCEEEHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECC RAGRYSCETIERYLKERLEKLRYEFPKTLVVNSHTTNTPGHAAVDFVAAINEKITEYSNV CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCE FVTPSLGTGISIDVQHFDRVYGIFQGVIPDSEARQALARVRDNVPRIVWCAKRGIGLIGS EEECCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEC GSTNYRLLSDWYQENQKENLALLSPLHKIDVDLPLVYDPIHLRTWAKLSARVNSSIRLYR CCCCCCHHHHHHHCCCCCCCHHHCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH QSMEEGLTTDGHQIRLRSNAVHNNIIRDLRLAFLATEPGDLRERQRLVLEIVKVQKDWVE HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHH KRQKGKEIKRQIKKIKQQNQITAATNVANAKDIDYLEYEHLSGKHSLTDEERHQIQKYNL HHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCC HQRYGILVTPSLKLRDDQGYYTQLLIHYYLTHESEYFQIRDQKEWHQQLSWGNGKVFLPD HHHCCEEECCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCEEEECC LKTYTLEVEAMRALGMPQFIDIEREFTENASDLIWLKDVVFQHSRHIKRVLGLDFIRCQE CCEEEEEHHHHHHCCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KITAIKVLSRLLNLLGLRLKRVNNIYQIDLETFNDERQNIFSVWQQRDEVILTQINNMRR HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKYNLLSNQNPQAKNTNSVISTMVSLF HHHHHHCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MVKSGWLQRYSHVTAGGWWCSGLDPLNNWQGMEWGCFKPNQPRTNQNGKSIKYEHPPSTA CCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHH TRIFCLRVTLEIWRQVSGRYNFPIPGDITINSQGEAEGFWQWVMERNIPVIICEGAKKAA HHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEECCCHHHH TLLSQGYVAIAIPGITSGYRVVKDKFGKVTSRQLIPDLAAFTTIKRTFYICFDYETQQRK HHHHCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHH IAAVSNAISQLGCLFQAKKCPVKVIELPGLEKGVDELIVAKGASVFEKVYRQSVDLEIYL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHCHHHHHHHCCHHHHHHHHHHCCCEEEEE AQIKPHSELTIPAAITVNRPYLEEIPFPNSGLVGVKSAKGTGKTTSLQAVVQQAKSINRP EEECCCCCEEEEEEEEECCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCC VLLITHRIQLGRFLCEKIGIQWGLINHAEGLTKNRDWLRKIEPQSVGLCVDSIWKLRPEE EEEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHH WQGAIIILDEVEQSLWHLLNSNTCKHKRVRILKLFQQLISLVLSTGGLVIAQDADLSDVS CCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH LEYLQGLSGCKIIPWVLVNQWKPQRGWEVTFYDSPNPIPLIQQLELDLLAGRKCYVTTDS HHHHCCCCCCEEEHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECC RAGRYSCETIERYLKERLEKLRYEFPKTLVVNSHTTNTPGHAAVDFVAAINEKITEYSNV CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCE FVTPSLGTGISIDVQHFDRVYGIFQGVIPDSEARQALARVRDNVPRIVWCAKRGIGLIGS EEECCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEC GSTNYRLLSDWYQENQKENLALLSPLHKIDVDLPLVYDPIHLRTWAKLSARVNSSIRLYR CCCCCCHHHHHHHCCCCCCCHHHCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH QSMEEGLTTDGHQIRLRSNAVHNNIIRDLRLAFLATEPGDLRERQRLVLEIVKVQKDWVE HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHH KRQKGKEIKRQIKKIKQQNQITAATNVANAKDIDYLEYEHLSGKHSLTDEERHQIQKYNL HHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCC HQRYGILVTPSLKLRDDQGYYTQLLIHYYLTHESEYFQIRDQKEWHQQLSWGNGKVFLPD HHHCCEEECCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCEEEECC LKTYTLEVEAMRALGMPQFIDIEREFTENASDLIWLKDVVFQHSRHIKRVLGLDFIRCQE CCEEEEEHHHHHHCCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KITAIKVLSRLLNLLGLRLKRVNNIYQIDLETFNDERQNIFSVWQQRDEVILTQINNMRR HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKYNLLSNQNPQAKNTNSVISTMVSLF HHHHHHCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679201 [H]