| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231081
Identifier: 17231081
GI number: 17231081
Start: 4337442
End: 4338047
Strand: Direct
Name: 17231081
Synonym: alr3589
Alternate gene names: NA
Gene position: 4337442-4338047 (Clockwise)
Preceding gene: 17231080
Following gene: 17231082
Centisome position: 67.63
GC content: 44.22
Gene sequence:
>606_bases ATGAAGAACAAATTTTTAGCTCTAGCCGCTTTTGGTGCTGCTGCTTTAGGTACTGCAATTGTTTCTGCTCCTGCTCACGC ACAAATTCCTCAAGGTAGTGGTCCACAGAGCAATATTACCGTTAACGTATCCGTTCCCGAAATTCTGTATCTGAGAACAA TTACAGATATTGATTTAACAATCGATGCTGCTGATTTGACCGGTGCTACATTAAACGCAGTAGCAGGAAGCAACCCTCCT GCTTTTACTGGAACTCAGAATCTTGAAGATGGTGCTGGTCTAGTTGATACTAATTCTCCATTTGCTGGAGGATTTGCAGA TGGTGTCCCTGTCGTAAAAACCATTCCCAGTGCCTACGTTGTTTGGTCTAATTCTCCTACAGGGAACTACCAAGTACAAG TAACAACACCTGGTGGTGGACTTGTTGGACCTGGTGGTGGAGTAGTTAACGTTGCAGTTAACGGCGCTAATCCATCTACA CAGACTGCTCAAGGTTTAATTAATGCCACTGCTCAAAATATTTTATTAGACCTAGCGGCTGCAAGTGGCACCATCTCTGC TGGGACTTACACAGGCAACATCACAGTTGAAGCTTTTAGACCGTAG
Upstream 100 bases:
>100_bases TTCAGCCAATTGTAGCCAAACATCGCATTGATTGAATCAGATTTACTAACAGTCAATACAAATTGACACAAACACAAACT ATAGGGAGACTTATTTCATC
Downstream 100 bases:
>100_bases TCTATTGATTTTTTCCTTAATGACATTAGGAGAAATAAACTGCCTCAAACCTCGCAAGTAAAAAGCAGATTTATCTCCTA TTGCCTATACGATTCAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKNKFLALAAFGAAALGTAIVSAPAHAQIPQGSGPQSNITVNVSVPEILYLRTITDIDLTIDAADLTGATLNAVAGSNPP AFTGTQNLEDGAGLVDTNSPFAGGFADGVPVVKTIPSAYVVWSNSPTGNYQVQVTTPGGGLVGPGGGVVNVAVNGANPST QTAQGLINATAQNILLDLAAASGTISAGTYTGNITVEAFRP
Sequences:
>Translated_201_residues MKNKFLALAAFGAAALGTAIVSAPAHAQIPQGSGPQSNITVNVSVPEILYLRTITDIDLTIDAADLTGATLNAVAGSNPP AFTGTQNLEDGAGLVDTNSPFAGGFADGVPVVKTIPSAYVVWSNSPTGNYQVQVTTPGGGLVGPGGGVVNVAVNGANPST QTAQGLINATAQNILLDLAAASGTISAGTYTGNITVEAFRP >Mature_201_residues MKNKFLALAAFGAAALGTAIVSAPAHAQIPQGSGPQSNITVNVSVPEILYLRTITDIDLTIDAADLTGATLNAVAGSNPP AFTGTQNLEDGAGLVDTNSPFAGGFADGVPVVKTIPSAYVVWSNSPTGNYQVQVTTPGGGLVGPGGGVVNVAVNGANPST QTAQGLINATAQNILLDLAAASGTISAGTYTGNITVEAFRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19903; Mature: 19903
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKFLALAAFGAAALGTAIVSAPAHAQIPQGSGPQSNITVNVSVPEILYLRTITDIDLT CCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEE IDAADLTGATLNAVAGSNPPAFTGTQNLEDGAGLVDTNSPFAGGFADGVPVVKTIPSAYV EECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHEECCCEEE VWSNSPTGNYQVQVTTPGGGLVGPGGGVVNVAVNGANPSTQTAQGLINATAQNILLDLAA EECCCCCCCEEEEEECCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEC ASGTISAGTYTGNITVEAFRP CCCEEECCEEECEEEEEEECC >Mature Secondary Structure MKNKFLALAAFGAAALGTAIVSAPAHAQIPQGSGPQSNITVNVSVPEILYLRTITDIDLT CCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEE IDAADLTGATLNAVAGSNPPAFTGTQNLEDGAGLVDTNSPFAGGFADGVPVVKTIPSAYV EECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHEECCCEEE VWSNSPTGNYQVQVTTPGGGLVGPGGGVVNVAVNGANPSTQTAQGLINATAQNILLDLAA EECCCCCCCEEEEEECCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEC ASGTISAGTYTGNITVEAFRP CCCEEECCEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA