| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231082
Identifier: 17231082
GI number: 17231082
Start: 4338377
End: 4338940
Strand: Direct
Name: 17231082
Synonym: alr3590
Alternate gene names: NA
Gene position: 4338377-4338940 (Clockwise)
Preceding gene: 17231081
Following gene: 17231083
Centisome position: 67.64
GC content: 40.43
Gene sequence:
>564_bases ATGTCATGGCATGAAATCAAGCATTACAAAAATTATCTGTTCAGTTGTTTTGGCTTGAGTGCAGCGATCCTACTCTGGTC TCAGACTCCCACACAAGCACAATTTACCTCGAATCTCGAACCCATAGAAATTTACGAATTATCTACTCCTCAAACACTGA CCATTCCTCCCATAGGATATTCAGAAATTTCTCTGACAACTAAAAGTGATTCCGTCAGCAATCAAGGAGATTTATTAGCG CCTCCTAATTTTAATGCTTTTGTAATTCGAGAATTTCCTGCGGTGTGGCAGATGCGTGTTCCCATAGATCAAGTTGATTC TCTTTACGCCACTTATGAGATGAAAGGTGAGAATGGTAGAACTAATGCTGTTAGTAATGAACAGCGTTCTGATTCTGCTG TGCAAGTCATCTTAGAACCTCTACCTATTATGGAGATTTCCCGTGATCTCAATAGTAATACTGCACTGGTACAAGGCGGA TTGCGCTTAAGAATGGACATTTCTAATGCTCAGTTTGCTGGCAATTACGCTGGGGAATTAACAGTATTAGTAGAGCGTCG TTAA
Upstream 100 bases:
>100_bases CTCGACAATGTATAAAGTTTTGACATAACACATTGTCCAATTAGTAAAGTCGGGAAATAAATATTACTCTACATGGCTAT GAGGTGGATAATTTACAATT
Downstream 100 bases:
>100_bases TTTCTAGCAATTAAATTTCCCAAAAAAGTGATGTTATAGTCTGTTTGCAAGTGAAGAGATTAAATCAAATGTTACCAAAA TTAAAAAATATTACCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSWHEIKHYKNYLFSCFGLSAAILLWSQTPTQAQFTSNLEPIEIYELSTPQTLTIPPIGYSEISLTTKSDSVSNQGDLLA PPNFNAFVIREFPAVWQMRVPIDQVDSLYATYEMKGENGRTNAVSNEQRSDSAVQVILEPLPIMEISRDLNSNTALVQGG LRLRMDISNAQFAGNYAGELTVLVERR
Sequences:
>Translated_187_residues MSWHEIKHYKNYLFSCFGLSAAILLWSQTPTQAQFTSNLEPIEIYELSTPQTLTIPPIGYSEISLTTKSDSVSNQGDLLA PPNFNAFVIREFPAVWQMRVPIDQVDSLYATYEMKGENGRTNAVSNEQRSDSAVQVILEPLPIMEISRDLNSNTALVQGG LRLRMDISNAQFAGNYAGELTVLVERR >Mature_186_residues SWHEIKHYKNYLFSCFGLSAAILLWSQTPTQAQFTSNLEPIEIYELSTPQTLTIPPIGYSEISLTTKSDSVSNQGDLLAP PNFNAFVIREFPAVWQMRVPIDQVDSLYATYEMKGENGRTNAVSNEQRSDSAVQVILEPLPIMEISRDLNSNTALVQGGL RLRMDISNAQFAGNYAGELTVLVERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20962; Mature: 20831
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWHEIKHYKNYLFSCFGLSAAILLWSQTPTQAQFTSNLEPIEIYELSTPQTLTIPPIGY CCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCCCCEEEEECCCCCEEEECCCCC SEISLTTKSDSVSNQGDLLAPPNFNAFVIREFPAVWQMRVPIDQVDSLYATYEMKGENGR CEEEEEECCCCCCCCCCEECCCCCCEEEEEECCCEEEEECCHHHHCCEEEEEEEECCCCC TNAVSNEQRSDSAVQVILEPLPIMEISRDLNSNTALVQGGLRLRMDISNAQFAGNYAGEL CCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCEEEEEECCCCEECCCCCCEE TVLVERR EEEEECC >Mature Secondary Structure SWHEIKHYKNYLFSCFGLSAAILLWSQTPTQAQFTSNLEPIEIYELSTPQTLTIPPIGY CHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCCCCEEEEECCCCCEEEECCCCC SEISLTTKSDSVSNQGDLLAPPNFNAFVIREFPAVWQMRVPIDQVDSLYATYEMKGENGR CEEEEEECCCCCCCCCCEECCCCCCEEEEEECCCEEEEECCHHHHCCEEEEEEEECCCCC TNAVSNEQRSDSAVQVILEPLPIMEISRDLNSNTALVQGGLRLRMDISNAQFAGNYAGEL CCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEECCEEEEEECCCCEECCCCCCEE TVLVERR EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA