Click here to switch to the map view.

The map label for this gene is 17231080

Identifier: 17231080

GI number: 17231080

Start: 4334541

End: 4337267

Strand: Direct

Name: 17231080

Synonym: alr3588

Alternate gene names: NA

Gene position: 4334541-4337267 (Clockwise)

Preceding gene: 17231076

Following gene: 17231081

Centisome position: 67.58

GC content: 40.7

Gene sequence:

>2727_bases
ATGGGAACCTACAACGGTACCACACCATTCCCCGATCCGGGCAGTAGCACATCAACCGCCCTAGACACTGGACTCTTGAT
TGGAGGCTCGCTCCTCAGCACACCAAGCTTATTTCAAGATAACCTCAGCCGTCTCATTCCATCTGATCTATCTGATTACT
ACAGATTCACTCTTAGCAGTTCCAGCATAGTCACCCTGGAACTGGATGGATTAACAGATAACGTAAATTTATTTTTGCGA
AACAGTGCTGGTAGTTCCCTTGCGGCTTCCAGTAATGCTGGAACTACGGCAGAGAGAATTCGTTTTAGCATTTCTGACCC
ACCAGATAACCCATTTTACGCACACGCTTTTATCCCCTCTGGTTCAATTTCCACCCCTTATGATCTTCGGCTTTCCGCAG
AAGTTATTCAGCAAAACAATATAAACGACAATACAATAGCTAATGCTAGAAATATTGGTACATTTAACACCACTACTAGC
ATTACTCCCGTAACTGATTATGTTAGTGGTTCAGGTCAAGTTATAGATCAAAACGACTACTATAGTTTCACATTAACCAA
CAGTGGAACAGTTGACATCAACTTAAACAGTCTGAATGGTACAGATACTCTCTATGCTGATCTTCAACTTATAAGTAGTT
CCAACTCAGTTATTCAAACTAGCGCCACTGTTGGAACATCATTAGAATCAATAAGTCGTAGTCTTGCAGCTGGTACATAC
TATATCCGGGCCTATTCTCAGTCAGATCCCGGTAACTATAATTTAGAGTTTAACTTTAGCGCCGATCCACCAGATGCTGG
GGGAAACACATCTGATACTTCTACCCCAATTAACCTACCCGCAACCTTTTCAGAGATAATTTCGGATCAAGTTAGTCTCG
GAGATTCTAGCGACTATTATCAGTTCACTCTAGCTTCAGCATCCCTGGTAGAGATCCAATTCACATCCCTGACAGCAGAT
GCAAATTTATATCTTCAAACCCAAAATGGTGGTAACATTCTCAGTTCAACTCAGCCAGGAACAGCCTTAGATGCCGTTCG
GTTGAGTTTGAATGCTGGTACTTACAATATTTTAGTTAATCGGGGTTCTACAGAAACTGCACAATATACCTTGAGTGGTT
TTGCTCAAGCAATAGGAAATGATCAAGCACCCAACAGTACAACATTAGCGCTGAATCTGAACTTAAATAGTCCTATTTCT
CTCAATGAATTTGTAGGCAATATAGATACTAACGATTACTATAAATTCACAGTAAATGGGACTACAGAAATCAATCTTGA
TCTAAGTATTTTGAATAGCTATTTATTAGATCCACAACTAGTTAATGCAGATGTGCAAATACTTAACTCTGGTGGTACAC
AAGTAGCTATATCTAACCAAACTGGAAATAGCAACGAAAGCATCAACACCATATTAGGTGCTGGTACTTACTTTATTCGT
GTCTATACTTCTGGTTTAGCTAATACATTCTATGATTTGAATATCACAGCCCAGTCCCAAGCTCTCTTAGTTCAAGATAT
TAATCCTACTGGTAATTCCGATCCTGCAAACCTTACCACATTAGGCAACACACTGTATTTCACAGCTAATGATGGTATAA
ATGGTGTGCAGCTATGGAGCAGTAACGGTGATATAACTACTCGTTTGAGTAATATCAGTAGCTTTAACCCTACTAATCTG
ATAGTTTTCAACAATAGGTTGTATTTCGCTGCTAGTAATGACACTTTCGGTAGAGAACTGTGGGAATATAACGGTACTAC
AGTCAACAGAATTAGTGACATTAATGTTGGTGCTGGCAATTCTAATCCTGGTAATTTAACTGTCGCTGGAAACAAACTTT
TCTTTACAGCCGTTGATAATGATAGCATCAGGAAACTATGGGTTTATAATGGCACAAACGTTAATTTAGTAGATGTTAAC
GCAAGTTTTTCTAATAGTAGTACACCCACTTTTACTACTACTTTTAATAATCAACTCTTCTTCACAGCCCAAAACAATAG
TCAACTTTGGTCAACCGATGGAACTATCGGTGGTACACAGGTTATAAGTGCAGGGGGAATAACAAAATCAACTCCTCGTA
ACTTGACAGTTGTTGGTAATACTCTATATTTCACCGCCAACAATGGCACGAGTGGACATGAAATATGGCAGTATCAAAAC
GGCACTACAGCCAGCCTCTTGGAGGATATTACCCCAGGTAATAATTCTTTTGCCCCTAGTTCTCTGACGGCCGTTGGTAA
TACCTTATATTTTGTCACAGATAGCGACAATGACTTTAATTTGGAACTGTGGAAGAGTGATGGTACTGCGGCTGGAACCG
ATATTATTGGAACCGATGGACAGGCACCCAACTTGGGTCTAGGTTCCTTTTCTTTAACTGCTGTGGACAACACGCTCTAT
TTTGTAGCAAATGATCCGATTTCTGGTTTAGAACTCTGGAAAACAGATGGTACATTTGCCAACACAGCAGTAGTGAGAAA
TATCTCAAGTGGTGCTGCTGACAGTCTTCCCACTGGCCTCGTCAACTTCAATGGTACTCTCGCTTTTGCCGCTTCAGATG
GTATCAATCGAGAGGTGTGGTTCAGTAACGGCACAGAGCTAAATACACGCAAGGTTAGCAACATTAACCCTACAGGAAAT
GCTAACCCTGCTTCGCTCACTGTCGTTGGTACGAAACTGTTCTTCACCGCTAACGGGGCTAACGGCACGGAATTATACGT
AATTTAA

Upstream 100 bases:

>100_bases
GAAATTTGGCAAAAAGAAGAACAAATAGTGTTAAACCGCCACCAAAATACTTTACAGCCTTTGCAGTTGTTGAGTTGCTA
ATAATAAAAGGTAGATAGCT

Downstream 100 bases:

>100_bases
AAGGAGGTGATGCTTAAAAGACAAAATCTATCTGAACGATAAACATCCATAAATGGTTGCAGTTTCACGAAGATTTCAGC
CAATTGTAGCCAAACATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Hyalin Repeat Protein; Peptidase-Like; Peptidase; Hyalin Repeat-Containing Protein; Quinoprotein; YD Repeat-Containing Protein; Cycloinulo-Oligosaccharide Fructanotransferase; Cna B Domain-Containing Protein; Peptidase Domain Protein; Ig Family Protein; Cadherin

Number of amino acids: Translated: 908; Mature: 907

Protein sequence:

>908_residues
MGTYNGTTPFPDPGSSTSTALDTGLLIGGSLLSTPSLFQDNLSRLIPSDLSDYYRFTLSSSSIVTLELDGLTDNVNLFLR
NSAGSSLAASSNAGTTAERIRFSISDPPDNPFYAHAFIPSGSISTPYDLRLSAEVIQQNNINDNTIANARNIGTFNTTTS
ITPVTDYVSGSGQVIDQNDYYSFTLTNSGTVDINLNSLNGTDTLYADLQLISSSNSVIQTSATVGTSLESISRSLAAGTY
YIRAYSQSDPGNYNLEFNFSADPPDAGGNTSDTSTPINLPATFSEIISDQVSLGDSSDYYQFTLASASLVEIQFTSLTAD
ANLYLQTQNGGNILSSTQPGTALDAVRLSLNAGTYNILVNRGSTETAQYTLSGFAQAIGNDQAPNSTTLALNLNLNSPIS
LNEFVGNIDTNDYYKFTVNGTTEINLDLSILNSYLLDPQLVNADVQILNSGGTQVAISNQTGNSNESINTILGAGTYFIR
VYTSGLANTFYDLNITAQSQALLVQDINPTGNSDPANLTTLGNTLYFTANDGINGVQLWSSNGDITTRLSNISSFNPTNL
IVFNNRLYFAASNDTFGRELWEYNGTTVNRISDINVGAGNSNPGNLTVAGNKLFFTAVDNDSIRKLWVYNGTNVNLVDVN
ASFSNSSTPTFTTTFNNQLFFTAQNNSQLWSTDGTIGGTQVISAGGITKSTPRNLTVVGNTLYFTANNGTSGHEIWQYQN
GTTASLLEDITPGNNSFAPSSLTAVGNTLYFVTDSDNDFNLELWKSDGTAAGTDIIGTDGQAPNLGLGSFSLTAVDNTLY
FVANDPISGLELWKTDGTFANTAVVRNISSGAADSLPTGLVNFNGTLAFAASDGINREVWFSNGTELNTRKVSNINPTGN
ANPASLTVVGTKLFFTANGANGTELYVI

Sequences:

>Translated_908_residues
MGTYNGTTPFPDPGSSTSTALDTGLLIGGSLLSTPSLFQDNLSRLIPSDLSDYYRFTLSSSSIVTLELDGLTDNVNLFLR
NSAGSSLAASSNAGTTAERIRFSISDPPDNPFYAHAFIPSGSISTPYDLRLSAEVIQQNNINDNTIANARNIGTFNTTTS
ITPVTDYVSGSGQVIDQNDYYSFTLTNSGTVDINLNSLNGTDTLYADLQLISSSNSVIQTSATVGTSLESISRSLAAGTY
YIRAYSQSDPGNYNLEFNFSADPPDAGGNTSDTSTPINLPATFSEIISDQVSLGDSSDYYQFTLASASLVEIQFTSLTAD
ANLYLQTQNGGNILSSTQPGTALDAVRLSLNAGTYNILVNRGSTETAQYTLSGFAQAIGNDQAPNSTTLALNLNLNSPIS
LNEFVGNIDTNDYYKFTVNGTTEINLDLSILNSYLLDPQLVNADVQILNSGGTQVAISNQTGNSNESINTILGAGTYFIR
VYTSGLANTFYDLNITAQSQALLVQDINPTGNSDPANLTTLGNTLYFTANDGINGVQLWSSNGDITTRLSNISSFNPTNL
IVFNNRLYFAASNDTFGRELWEYNGTTVNRISDINVGAGNSNPGNLTVAGNKLFFTAVDNDSIRKLWVYNGTNVNLVDVN
ASFSNSSTPTFTTTFNNQLFFTAQNNSQLWSTDGTIGGTQVISAGGITKSTPRNLTVVGNTLYFTANNGTSGHEIWQYQN
GTTASLLEDITPGNNSFAPSSLTAVGNTLYFVTDSDNDFNLELWKSDGTAAGTDIIGTDGQAPNLGLGSFSLTAVDNTLY
FVANDPISGLELWKTDGTFANTAVVRNISSGAADSLPTGLVNFNGTLAFAASDGINREVWFSNGTELNTRKVSNINPTGN
ANPASLTVVGTKLFFTANGANGTELYVI
>Mature_907_residues
GTYNGTTPFPDPGSSTSTALDTGLLIGGSLLSTPSLFQDNLSRLIPSDLSDYYRFTLSSSSIVTLELDGLTDNVNLFLRN
SAGSSLAASSNAGTTAERIRFSISDPPDNPFYAHAFIPSGSISTPYDLRLSAEVIQQNNINDNTIANARNIGTFNTTTSI
TPVTDYVSGSGQVIDQNDYYSFTLTNSGTVDINLNSLNGTDTLYADLQLISSSNSVIQTSATVGTSLESISRSLAAGTYY
IRAYSQSDPGNYNLEFNFSADPPDAGGNTSDTSTPINLPATFSEIISDQVSLGDSSDYYQFTLASASLVEIQFTSLTADA
NLYLQTQNGGNILSSTQPGTALDAVRLSLNAGTYNILVNRGSTETAQYTLSGFAQAIGNDQAPNSTTLALNLNLNSPISL
NEFVGNIDTNDYYKFTVNGTTEINLDLSILNSYLLDPQLVNADVQILNSGGTQVAISNQTGNSNESINTILGAGTYFIRV
YTSGLANTFYDLNITAQSQALLVQDINPTGNSDPANLTTLGNTLYFTANDGINGVQLWSSNGDITTRLSNISSFNPTNLI
VFNNRLYFAASNDTFGRELWEYNGTTVNRISDINVGAGNSNPGNLTVAGNKLFFTAVDNDSIRKLWVYNGTNVNLVDVNA
SFSNSSTPTFTTTFNNQLFFTAQNNSQLWSTDGTIGGTQVISAGGITKSTPRNLTVVGNTLYFTANNGTSGHEIWQYQNG
TTASLLEDITPGNNSFAPSSLTAVGNTLYFVTDSDNDFNLELWKSDGTAAGTDIIGTDGQAPNLGLGSFSLTAVDNTLYF
VANDPISGLELWKTDGTFANTAVVRNISSGAADSLPTGLVNFNGTLAFAASDGINREVWFSNGTELNTRKVSNINPTGNA
NPASLTVVGTKLFFTANGANGTELYVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96327; Mature: 96196

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.1 %Met     (Translated Protein)
0.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTYNGTTPFPDPGSSTSTALDTGLLIGGSLLSTPSLFQDNLSRLIPSDLSDYYRFTLSS
CCCCCCCCCCCCCCCCCCHHHHCCEEECCHHHCCCHHHHHHHHHHCCCCCCCCEEEEECC
SSIVTLELDGLTDNVNLFLRNSAGSSLAASSNAGTTAERIRFSISDPPDNPFYAHAFIPS
CCEEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECC
GSISTPYDLRLSAEVIQQNNINDNTIANARNIGTFNTTTSITPVTDYVSGSGQVIDQNDY
CCCCCCEEEEEEEEHHHCCCCCCCEECCCCCCCCCCCCCCCCEEHHEECCCCCEEECCCE
YSFTLTNSGTVDINLNSLNGTDTLYADLQLISSSNSVIQTSATVGTSLESISRSLAAGTY
EEEEEECCCEEEEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCEE
YIRAYSQSDPGNYNLEFNFSADPPDAGGNTSDTSTPINLPATFSEIISDQVSLGDSSDYY
EEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCEE
QFTLASASLVEIQFTSLTADANLYLQTQNGGNILSSTQPGTALDAVRLSLNAGTYNILVN
EEEEECCEEEEEEEEEEEECCEEEEEECCCCCEECCCCCCCEEEEEEEEECCCEEEEEEE
RGSTETAQYTLSGFAQAIGNDQAPNSTTLALNLNLNSPISLNEFVGNIDTNDYYKFTVNG
CCCCCCEEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEECC
TTEINLDLSILNSYLLDPQLVNADVQILNSGGTQVAISNQTGNSNESINTILGAGTYFIR
CEEEEEEHHHHHHHHCCCEEECCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCEEEEE
VYTSGLANTFYDLNITAQSQALLVQDINPTGNSDPANLTTLGNTLYFTANDGINGVQLWS
EEECCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEC
SNGDITTRLSNISSFNPTNLIVFNNRLYFAASNDTFGRELWEYNGTTVNRISDINVGAGN
CCCCEEEEECCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHCCCCEEEEEEEEEECCCC
SNPGNLTVAGNKLFFTAVDNDSIRKLWVYNGTNVNLVDVNASFSNSSTPTFTTTFNNQLF
CCCCEEEEECCEEEEEEECCCCEEEEEEEECCEEEEEEEECCCCCCCCCEEEEEECCEEE
FTAQNNSQLWSTDGTIGGTQVISAGGITKSTPRNLTVVGNTLYFTANNGTSGHEIWQYQN
EEECCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEECC
GTTASLLEDITPGNNSFAPSSLTAVGNTLYFVTDSDNDFNLELWKSDGTAAGTDIIGTDG
CCHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCC
QAPNLGLGSFSLTAVDNTLYFVANDPISGLELWKTDGTFANTAVVRNISSGAADSLPTGL
CCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEECCCCEECEEEEEECCCCCCCCCCCCE
VNFNGTLAFAASDGINREVWFSNGTELNTRKVSNINPTGNANPASLTVVGTKLFFTANGA
EECCCEEEEEECCCCCEEEEECCCCEECEEEECCCCCCCCCCCCEEEEEEEEEEEEECCC
NGTELYVI
CCCEEEEC
>Mature Secondary Structure 
GTYNGTTPFPDPGSSTSTALDTGLLIGGSLLSTPSLFQDNLSRLIPSDLSDYYRFTLSS
CCCCCCCCCCCCCCCCCHHHHCCEEECCHHHCCCHHHHHHHHHHCCCCCCCCEEEEECC
SSIVTLELDGLTDNVNLFLRNSAGSSLAASSNAGTTAERIRFSISDPPDNPFYAHAFIPS
CCEEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECC
GSISTPYDLRLSAEVIQQNNINDNTIANARNIGTFNTTTSITPVTDYVSGSGQVIDQNDY
CCCCCCEEEEEEEEHHHCCCCCCCEECCCCCCCCCCCCCCCCEEHHEECCCCCEEECCCE
YSFTLTNSGTVDINLNSLNGTDTLYADLQLISSSNSVIQTSATVGTSLESISRSLAAGTY
EEEEEECCCEEEEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCEE
YIRAYSQSDPGNYNLEFNFSADPPDAGGNTSDTSTPINLPATFSEIISDQVSLGDSSDYY
EEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCEE
QFTLASASLVEIQFTSLTADANLYLQTQNGGNILSSTQPGTALDAVRLSLNAGTYNILVN
EEEEECCEEEEEEEEEEEECCEEEEEECCCCCEECCCCCCCEEEEEEEEECCCEEEEEEE
RGSTETAQYTLSGFAQAIGNDQAPNSTTLALNLNLNSPISLNEFVGNIDTNDYYKFTVNG
CCCCCCEEEEHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEECC
TTEINLDLSILNSYLLDPQLVNADVQILNSGGTQVAISNQTGNSNESINTILGAGTYFIR
CEEEEEEHHHHHHHHCCCEEECCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCEEEEE
VYTSGLANTFYDLNITAQSQALLVQDINPTGNSDPANLTTLGNTLYFTANDGINGVQLWS
EEECCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEC
SNGDITTRLSNISSFNPTNLIVFNNRLYFAASNDTFGRELWEYNGTTVNRISDINVGAGN
CCCCEEEEECCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHCCCCEEEEEEEEEECCCC
SNPGNLTVAGNKLFFTAVDNDSIRKLWVYNGTNVNLVDVNASFSNSSTPTFTTTFNNQLF
CCCCEEEEECCEEEEEEECCCCEEEEEEEECCEEEEEEEECCCCCCCCCEEEEEECCEEE
FTAQNNSQLWSTDGTIGGTQVISAGGITKSTPRNLTVVGNTLYFTANNGTSGHEIWQYQN
EEECCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEECC
GTTASLLEDITPGNNSFAPSSLTAVGNTLYFVTDSDNDFNLELWKSDGTAAGTDIIGTDG
CCHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCC
QAPNLGLGSFSLTAVDNTLYFVANDPISGLELWKTDGTFANTAVVRNISSGAADSLPTGL
CCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEECCCCEECEEEEEECCCCCCCCCCCCE
VNFNGTLAFAASDGINREVWFSNGTELNTRKVSNINPTGNANPASLTVVGTKLFFTANGA
EECCCEEEEEECCCCCEEEEECCCCEECEEEECCCCCCCCCCCCEEEEEEEEEEEEECCC
NGTELYVI
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA