| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230634
Identifier: 17230634
GI number: 17230634
Start: 3801614
End: 3802120
Strand: Direct
Name: 17230634
Synonym: alr3142
Alternate gene names: NA
Gene position: 3801614-3802120 (Clockwise)
Preceding gene: 17230632
Following gene: 17230638
Centisome position: 59.27
GC content: 39.84
Gene sequence:
>507_bases ATGCAAGAGTCTGTAGTTGAGCAAAATCAGAACTCCCAGAATAATATCATGCCAATTCTTTACAACAGGAATGATGCTTA TGTGCAGATCAATCCTGTGCAAGAGCAGGCGACACAATTATGGGAAACTCTCTCACAACAGGATACGGCTGTTGTTTACC AACAAGCCGTTGCGAAGACTTGGAAACTGTTAAAACAGGCGATCGCTCTGATTGTCTTTTTATTTGTTTCCTTGGTTGCC CTGATATTTTGGATTTGGGGTATAGGTTTTCAAAGTGGTTTTCATTTTCGCAAATGGCTAGAAGTTAAACAGCCCAATGT GAATGAGGTAGTAGGTTTATTTCTAAAAATTCTGTTCTGGCCTTTAATACTAGCTTTTCAGTGGGCTAACTCGTTTGTCA AAAAATATTTGGGTTGGGAAGTTCAATTTGACCTCTCAAGCTCAGAAACCACCCCAGAGACAACTGGAGAAACGTCTACT CCTCCGAAAGATTCATTAACAAATTAG
Upstream 100 bases:
>100_bases TAGAAAATTTATGATCTGAAGTTTTAATCTAAATTTAGAAGTAAAATTTGCAATATGATAAACCCATGTTCTCATATTTA GGAGGACAACATTAGCTTTT
Downstream 100 bases:
>100_bases GGAGACCGGGGATTGGGCGAAACTCTGGGAGTAAGTTCTCCCCCTGTCCCCCTCTGCCTCATCTATGACTAGTTGAGGGA ATTTTGTCATCATGGGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQESVVEQNQNSQNNIMPILYNRNDAYVQINPVQEQATQLWETLSQQDTAVVYQQAVAKTWKLLKQAIALIVFLFVSLVA LIFWIWGIGFQSGFHFRKWLEVKQPNVNEVVGLFLKILFWPLILAFQWANSFVKKYLGWEVQFDLSSSETTPETTGETST PPKDSLTN
Sequences:
>Translated_168_residues MQESVVEQNQNSQNNIMPILYNRNDAYVQINPVQEQATQLWETLSQQDTAVVYQQAVAKTWKLLKQAIALIVFLFVSLVA LIFWIWGIGFQSGFHFRKWLEVKQPNVNEVVGLFLKILFWPLILAFQWANSFVKKYLGWEVQFDLSSSETTPETTGETST PPKDSLTN >Mature_168_residues MQESVVEQNQNSQNNIMPILYNRNDAYVQINPVQEQATQLWETLSQQDTAVVYQQAVAKTWKLLKQAIALIVFLFVSLVA LIFWIWGIGFQSGFHFRKWLEVKQPNVNEVVGLFLKILFWPLILAFQWANSFVKKYLGWEVQFDLSSSETTPETTGETST PPKDSLTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19387; Mature: 19387
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQESVVEQNQNSQNNIMPILYNRNDAYVQINPVQEQATQLWETLSQQDTAVVYQQAVAKT CCCCHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WKLLKQAIALIVFLFVSLVALIFWIWGIGFQSGFHFRKWLEVKQPNVNEVVGLFLKILFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH PLILAFQWANSFVKKYLGWEVQFDLSSSETTPETTGETSTPPKDSLTN HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQESVVEQNQNSQNNIMPILYNRNDAYVQINPVQEQATQLWETLSQQDTAVVYQQAVAKT CCCCHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WKLLKQAIALIVFLFVSLVALIFWIWGIGFQSGFHFRKWLEVKQPNVNEVVGLFLKILFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH PLILAFQWANSFVKKYLGWEVQFDLSSSETTPETTGETSTPPKDSLTN HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA