| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230632
Identifier: 17230632
GI number: 17230632
Start: 3798691
End: 3800058
Strand: Direct
Name: 17230632
Synonym: alr3140
Alternate gene names: NA
Gene position: 3798691-3800058 (Clockwise)
Preceding gene: 17230631
Following gene: 17230634
Centisome position: 59.23
GC content: 37.43
Gene sequence:
>1368_bases ATGTCAGATGCAACTCCCAAAAATCCAGTTGTTATGCTCCACGGTTACTCTGATACGGGGAACTCTTTTCAAACGTGGAT AAAAAAGTTTCAAGAAAATAATTATGATGTCAAGATTATTCATATTTGTAAATATGTATCCCTATCTAATGAGATTAACA TTGAAGATATTGCTGAAGGACTAGATCAAGCTTTAGCGGAGAAATTAGGTAATAACAGAACCTTCGATGCGATCGTTCAC TCAACTGGAATGTTGGTGATTCGTGCTTGGTTGGCGAAATACTCTAGCCAAGGTTATTATCGACTCCAGCACTTGATTGG ATTAGCACCAGCCACTTTTGGTTCTCCTATTGCCCACAAAGGCCGCAGTTTTTTAGGTGCGCTGTTTAAAGGAAACAGAG AGTGGGGGCCAGACTTTTTAGAAGCAGGAACTCGCATATTAGATGCGTTGGAATTAGGTAGTAAGTTCAGTTGGGATTTG GCGCATAAAGATTTACTAGGTGAAACCACATTTTACGGTTCAGATAGTGATACACCTTTTGTATTTACCTTCTGTGGAAC ACAACAGTTCTTTCAATCATCATTAATAAATAACTTTCTTGGAAGAATCACAAATAGAGTTGGTGTACCGCTTGATGGTA CAGATGGTGTTGTCAGGTGGGCTGGATGTGAACTGAGAACACGTAAAATAACTATAGATTTTACTAAACAGCAACCTGAA GATAAATTATCTATCTCACCCTGGAAAAATAGTGGTATTGCCCATGCAGTGAGAGTTAAGGATCATAACCACGGCAGAAT TATGGGTGATCCTAGTTCAGACTTGGTAGAGTCAGTATTTCAGGCATTACAATTTACATCTGAACAAGATATTAATATTT GGCATCAGACAACTTTAAAGACCCTATCACCAAATGATTCCGAGAATGCAGAATGGCAACAGTTTATCATTCGGGCGATA GATGATAATGATGAGCCAATCCCTGATTACTATATTGAATTGGCAACAGCACAAAACAACCAATGGAAACGAATTGAAGA TTTTGGTGTAGATGTTCACGTATATGCACAAGATAAGAGTCTACGCTGTTTTCATGTAGACATCACAAAGACTAAAAATT TGCAAAATTTGCAGATACGTATTGTTGCGTCATCAAATTCAGAGTATGTGCGTTATACAGGATATGCTTCTAGTGCAGAA AATTTTGATTCTATTACCGATTTAGAGCTAGATATTTCTCATATTTTGCAGCAGAAAGAGATCAAATTTTTCTATCCATT TACCACAACGCTAGTGGAAATAAGACTTAAGCGACAAACAAGAAAACGATTATTGCAGTTTATGGCTTTCGCTGAATCAA AATTGTGA
Upstream 100 bases:
>100_bases TGGTGCTGGATGTGTCATTTATTTGTGAGCTAGTTTAATGCCATCCTTGTGGGTGGATATTTTTCAAAATTAATGACATC TACTACCTGTAAATAAGCTT
Downstream 100 bases:
>100_bases CATATCTCTTCCTTAAACAATCTTCCCGGCTTTACCAAACTCTCGCTTGATAGCGGCTTGCAAATCCTCTTGGTGAATCA CGGTATCACCTCGCTTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: PlaB Phospholipase
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSDATPKNPVVMLHGYSDTGNSFQTWIKKFQENNYDVKIIHICKYVSLSNEINIEDIAEGLDQALAEKLGNNRTFDAIVH STGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHKGRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDL AHKDLLGETTFYGSDSDTPFVFTFCGTQQFFQSSLINNFLGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPE DKLSISPWKNSGIAHAVRVKDHNHGRIMGDPSSDLVESVFQALQFTSEQDINIWHQTTLKTLSPNDSENAEWQQFIIRAI DDNDEPIPDYYIELATAQNNQWKRIEDFGVDVHVYAQDKSLRCFHVDITKTKNLQNLQIRIVASSNSEYVRYTGYASSAE NFDSITDLELDISHILQQKEIKFFYPFTTTLVEIRLKRQTRKRLLQFMAFAESKL
Sequences:
>Translated_455_residues MSDATPKNPVVMLHGYSDTGNSFQTWIKKFQENNYDVKIIHICKYVSLSNEINIEDIAEGLDQALAEKLGNNRTFDAIVH STGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHKGRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDL AHKDLLGETTFYGSDSDTPFVFTFCGTQQFFQSSLINNFLGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPE DKLSISPWKNSGIAHAVRVKDHNHGRIMGDPSSDLVESVFQALQFTSEQDINIWHQTTLKTLSPNDSENAEWQQFIIRAI DDNDEPIPDYYIELATAQNNQWKRIEDFGVDVHVYAQDKSLRCFHVDITKTKNLQNLQIRIVASSNSEYVRYTGYASSAE NFDSITDLELDISHILQQKEIKFFYPFTTTLVEIRLKRQTRKRLLQFMAFAESKL >Mature_454_residues SDATPKNPVVMLHGYSDTGNSFQTWIKKFQENNYDVKIIHICKYVSLSNEINIEDIAEGLDQALAEKLGNNRTFDAIVHS TGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHKGRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDLA HKDLLGETTFYGSDSDTPFVFTFCGTQQFFQSSLINNFLGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPED KLSISPWKNSGIAHAVRVKDHNHGRIMGDPSSDLVESVFQALQFTSEQDINIWHQTTLKTLSPNDSENAEWQQFIIRAID DNDEPIPDYYIELATAQNNQWKRIEDFGVDVHVYAQDKSLRCFHVDITKTKNLQNLQIRIVASSNSEYVRYTGYASSAEN FDSITDLELDISHILQQKEIKFFYPFTTTLVEIRLKRQTRKRLLQFMAFAESKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51848; Mature: 51717
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDATPKNPVVMLHGYSDTGNSFQTWIKKFQENNYDVKIIHICKYVSLSNEINIEDIAEG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCHHHHHHH LDQALAEKLGNNRTFDAIVHSTGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHK HHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH GRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDLAHKDLLGETTFYGSDSDTPF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEECCCCCCCCE VFTFCGTQQFFQSSLINNFLGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPE EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCCC DKLSISPWKNSGIAHAVRVKDHNHGRIMGDPSSDLVESVFQALQFTSEQDINIWHQTTLK CCEEECCCCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHE TLSPNDSENAEWQQFIIRAIDDNDEPIPDYYIELATAQNNQWKRIEDFGVDVHVYAQDKS ECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCEEEEEECCCC LRCFHVDITKTKNLQNLQIRIVASSNSEYVRYTGYASSAENFDSITDLELDISHILQQKE EEEEEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEECHHHHHHHCC IKFFYPFTTTLVEIRLKRQTRKRLLQFMAFAESKL CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDATPKNPVVMLHGYSDTGNSFQTWIKKFQENNYDVKIIHICKYVSLSNEINIEDIAEG CCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCHHHHHHH LDQALAEKLGNNRTFDAIVHSTGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHK HHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH GRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDLAHKDLLGETTFYGSDSDTPF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEECCCCCCCCE VFTFCGTQQFFQSSLINNFLGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPE EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCCC DKLSISPWKNSGIAHAVRVKDHNHGRIMGDPSSDLVESVFQALQFTSEQDINIWHQTTLK CCEEECCCCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHE TLSPNDSENAEWQQFIIRAIDDNDEPIPDYYIELATAQNNQWKRIEDFGVDVHVYAQDKS ECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCEEEEEECCCC LRCFHVDITKTKNLQNLQIRIVASSNSEYVRYTGYASSAENFDSITDLELDISHILQQKE EEEEEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEECHHHHHHHCC IKFFYPFTTTLVEIRLKRQTRKRLLQFMAFAESKL CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA