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The map label for this gene is yedY [H]

Identifier: 17230436

GI number: 17230436

Start: 3581323

End: 3582045

Strand: Direct

Name: yedY [H]

Synonym: alr2944

Alternate gene names: 17230436

Gene position: 3581323-3582045 (Clockwise)

Preceding gene: 17230435

Following gene: 17230437

Centisome position: 55.84

GC content: 38.31

Gene sequence:

>723_bases
ATGGGTTTAATTCATATTCGTCGTCTACAATTAACACGCCGACAGTTTCTGCAACTTTCTGGAATGTCAAGTGTAAGTCT
GCTATTAGGTGGCTGTGGTACACCAGCTTTAGAAGATTTAGTGGGTACAGTTTCTCAACCACTCAACCAAAAAGTAGAAA
AGTTAATATTTAATCCTCAAAAGTTAGTACCAGAATTTTCCCCAAGTGAAATCCAACCAGAAGGATTAATAGTTAATAGC
TTTCGTTCTACACCGATTATTGATGTCGATAAATATCGTTTAATTGTGGACGGGGAAGTTAATCATCCTCTAAATATCAG
TATGGCAGAAATCCAAAACTTGCCCTTGACTTCCATGATTATACGCCATGTTTGTGTGGAAGGTTGGGCGGCGATCGTGC
AGTGGGGTGGTGTACAGCTAAGAGAGATTATTGCCCTCGCGCAACCAAAAGAAAATGTGCAGTATGTTTATTTCAAATCT
GCTGATGGTTACTATGAAAGTTGGGATATTGCCTCAGCTTTGCATCCCCAAACATTATTAGCTTATGAAAAAAATGGTGA
ATCTTTACCCATTGATAATGGCGCGCCTTTACGTTTAGCTGCACCAATTAAACTTGGTTATAAGCAGAGTAAATGGGTAA
CTCAGATTACTTTGGCTAGTCATTTATCAATATTTAAAGGTTATTGGGAAGACAAGGGTTATGAATGGTTTGCAGGAATT
TAA

Upstream 100 bases:

>100_bases
ATATTTGTCATAGTTCACTCTTTATTAGGACGTAAAGCAGGTGGTGAAGAATTAACAGAGTCCATGTTCTGGTAAAGTCT
AGTCAATTGGTATTGAAAAT

Downstream 100 bases:

>100_bases
ATTTTATATCGGACTCATACTTGATTTTTGAAATTTAGGTAGGGCAATGCTTACCTTATCATGGTTTTGGTGGGCAATGC
CCACCCTACAGATACTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MGLIHIRRLQLTRRQFLQLSGMSSVSLLLGGCGTPALEDLVGTVSQPLNQKVEKLIFNPQKLVPEFSPSEIQPEGLIVNS
FRSTPIIDVDKYRLIVDGEVNHPLNISMAEIQNLPLTSMIIRHVCVEGWAAIVQWGGVQLREIIALAQPKENVQYVYFKS
ADGYYESWDIASALHPQTLLAYEKNGESLPIDNGAPLRLAAPIKLGYKQSKWVTQITLASHLSIFKGYWEDKGYEWFAGI

Sequences:

>Translated_240_residues
MGLIHIRRLQLTRRQFLQLSGMSSVSLLLGGCGTPALEDLVGTVSQPLNQKVEKLIFNPQKLVPEFSPSEIQPEGLIVNS
FRSTPIIDVDKYRLIVDGEVNHPLNISMAEIQNLPLTSMIIRHVCVEGWAAIVQWGGVQLREIIALAQPKENVQYVYFKS
ADGYYESWDIASALHPQTLLAYEKNGESLPIDNGAPLRLAAPIKLGYKQSKWVTQITLASHLSIFKGYWEDKGYEWFAGI
>Mature_239_residues
GLIHIRRLQLTRRQFLQLSGMSSVSLLLGGCGTPALEDLVGTVSQPLNQKVEKLIFNPQKLVPEFSPSEIQPEGLIVNSF
RSTPIIDVDKYRLIVDGEVNHPLNISMAEIQNLPLTSMIIRHVCVEGWAAIVQWGGVQLREIIALAQPKENVQYVYFKSA
DGYYESWDIASALHPQTLLAYEKNGESLPIDNGAPLRLAAPIKLGYKQSKWVTQITLASHLSIFKGYWEDKGYEWFAGI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=152, Percent_Identity=32.8947368421053, Blast_Score=86, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71992535, Length=224, Percent_Identity=25.8928571428571, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 26874; Mature: 26743

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIHIRRLQLTRRQFLQLSGMSSVSLLLGGCGTPALEDLVGTVSQPLNQKVEKLIFNPQ
CCCEEHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
KLVPEFSPSEIQPEGLIVNSFRSTPIIDVDKYRLIVDGEVNHPLNISMAEIQNLPLTSMI
HHCCCCCCCCCCCCCEEEECCCCCCEEEECCEEEEECCCCCCCCCEEHHHHCCCCHHHHH
IRHVCVEGWAAIVQWGGVQLREIIALAQPKENVQYVYFKSADGYYESWDIASALHPQTLL
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHCCCHHEE
AYEKNGESLPIDNGAPLRLAAPIKLGYKQSKWVTQITLASHLSIFKGYWEDKGYEWFAGI
EECCCCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure 
GLIHIRRLQLTRRQFLQLSGMSSVSLLLGGCGTPALEDLVGTVSQPLNQKVEKLIFNPQ
CCEEHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
KLVPEFSPSEIQPEGLIVNSFRSTPIIDVDKYRLIVDGEVNHPLNISMAEIQNLPLTSMI
HHCCCCCCCCCCCCCEEEECCCCCCEEEECCEEEEECCCCCCCCCEEHHHHCCCCHHHHH
IRHVCVEGWAAIVQWGGVQLREIIALAQPKENVQYVYFKSADGYYESWDIASALHPQTLL
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHCCCHHEE
AYEKNGESLPIDNGAPLRLAAPIKLGYKQSKWVTQITLASHLSIFKGYWEDKGYEWFAGI
EECCCCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500908 [H]