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The map label for this gene is 17230435

Identifier: 17230435

GI number: 17230435

Start: 3580794

End: 3581297

Strand: Direct

Name: 17230435

Synonym: alr2943

Alternate gene names: NA

Gene position: 3580794-3581297 (Clockwise)

Preceding gene: 17230432

Following gene: 17230436

Centisome position: 55.83

GC content: 40.08

Gene sequence:

>504_bases
ATGCTCACCAGTGGACTGCAAATTTACAACGCCAATCCCGTTTTTGGTGGCCGCGCTGGCTTACACATTCCGCCAATATT
TACCTTAGGTGGGTGGTTAGCTGGAGGTAGACATTGGCATTTTGCTGCCATGTGGTTATTCTCTTTAAATCTTTTGTGGT
ACGGATTTTATATATTATTTACTCAACGCTGGCGACATCGATTTGTAGGTGCTAATGACATCAAAGCATTGCAAAAAAGC
CAAAATAATAAACGTTTAATATACGCCTGGCATCGCATTATCTACACATCGATAATTCCCATATTGCTGCTAGCTCTACT
GACTGGCATAGGTATGTATAAACCTGCTCAATTCCCTTGGATTGTCGATATGTTTGGTAATTGGCAAAGTCTACGAATTG
TTCATTTTGCCTCAGTACCGATGGTAATTATATTTGTCATAGTTCACTCTTTATTAGGACGTAAAGCAGGTGGTGAAGAA
TTAACAGAGTCCATGTTCTGGTAA

Upstream 100 bases:

>100_bases
ATTTATGACTGTGACAATTCCTCCCAAAAAACGCAAATTACCCACCCAAGCTATAGGTGCTAAGATTTTCCACTCTGTTA
ATATCGTTAGCTTGTTCCTC

Downstream 100 bases:

>100_bases
AGTCTAGTCAATTGGTATTGAAAATATGGGTTTAATTCATATTCGTCGTCTACAATTAACACGCCGACAGTTTCTGCAAC
TTTCTGGAATGTCAAGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Conserved Protein

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLTSGLQIYNANPVFGGRAGLHIPPIFTLGGWLAGGRHWHFAAMWLFSLNLLWYGFYILFTQRWRHRFVGANDIKALQKS
QNNKRLIYAWHRIIYTSIIPILLLALLTGIGMYKPAQFPWIVDMFGNWQSLRIVHFASVPMVIIFVIVHSLLGRKAGGEE
LTESMFW

Sequences:

>Translated_167_residues
MLTSGLQIYNANPVFGGRAGLHIPPIFTLGGWLAGGRHWHFAAMWLFSLNLLWYGFYILFTQRWRHRFVGANDIKALQKS
QNNKRLIYAWHRIIYTSIIPILLLALLTGIGMYKPAQFPWIVDMFGNWQSLRIVHFASVPMVIIFVIVHSLLGRKAGGEE
LTESMFW
>Mature_167_residues
MLTSGLQIYNANPVFGGRAGLHIPPIFTLGGWLAGGRHWHFAAMWLFSLNLLWYGFYILFTQRWRHRFVGANDIKALQKS
QNNKRLIYAWHRIIYTSIIPILLLALLTGIGMYKPAQFPWIVDMFGNWQSLRIVHFASVPMVIIFVIVHSLLGRKAGGEE
LTESMFW

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19260; Mature: 19260

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSGLQIYNANPVFGGRAGLHIPPIFTLGGWLAGGRHWHFAAMWLFSLNLLWYGFYILF
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TQRWRHRFVGANDIKALQKSQNNKRLIYAWHRIIYTSIIPILLLALLTGIGMYKPAQFPW
HHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IVDMFGNWQSLRIVHFASVPMVIIFVIVHSLLGRKAGGEELTESMFW
CEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MLTSGLQIYNANPVFGGRAGLHIPPIFTLGGWLAGGRHWHFAAMWLFSLNLLWYGFYILF
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TQRWRHRFVGANDIKALQKSQNNKRLIYAWHRIIYTSIIPILLLALLTGIGMYKPAQFPW
HHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IVDMFGNWQSLRIVHFASVPMVIIFVIVHSLLGRKAGGEELTESMFW
CEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA