| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229836
Identifier: 17229836
GI number: 17229836
Start: 2826515
End: 2827834
Strand: Reverse
Name: 17229836
Synonym: all2344
Alternate gene names: NA
Gene position: 2827834-2826515 (Counterclockwise)
Preceding gene: 17229839
Following gene: 17229835
Centisome position: 44.09
GC content: 45.68
Gene sequence:
>1320_bases ATGAGTCAAAAACCCCTGATAGATTCTAGTACTGGACTAAAACAACCATTAGTTGCGGCACTAGCGAGTTTGGAAGTGCA GTTAGAACAAGAATTAGCTCGTTATCGGCGCACACGTATGGGAATCAGGGCAAACAGCCCATCTCGTGTGAATAGTTATG TTCATAATTATCCTCAAGAGTTGACCGATCAGAATGCCACAATGGCACATACTCAGCCATTGACAGTAGAAAGTAAATAC CAGGCAAAACCTTTATCTCTTCCCGCAAGCCCTGAGGAGAAAACAGCCTCAATTATTATCAAGTCACCTGTTCACGACAA AAACCCAACACCTAGTGCGGAAAATATATCCTCGCCTCCACGCCTAAATCCTTACACTCCTACAACTGTTGCCAAGACAG AAACACCAAATAACGCTCCCCTAGACACCACACCTGAAGGCAATACACAAATTCCTTTACCTCCAGCTAACTCCACCGAC ACTAGCAGTATAGTACCGGCGATCGCTCAAGGTAGTCAAAGCGAAAAACTCTTAGCTAATGATACTCCTGCCCAGCCCAA TGACTATTTAGAATCCAGTGAAGCACTACTGCGGAGTCTCACAGATGAACAGTCAGAAACTAGCCAAACCAACAACTCTA GCGATAGCCTGCTATCACCTTTAGGCATCGGTTCCATGTTGCTGTTATTAGTAGCAAGCCTGACTTTAGGTTACGTCGTT TTCAATCCCAAAACCTTACCCCAGCTAAATTTTGGCAGATTATTTAACGGTAATTCTTCTCCTACTACCGAAAATCCCCC AGAAGTTGCCAATAATCCCCCAAGTCAATCGCAACCAGAACTGACTTCCATTCCTAAATATCCAGACTTAACTGCTAGAG AGTTTCCAGAGTTGAGAAATCCTATTGATGTAGTTGGCTTAAAACCTAAAGTACAACCAACACCCATCGCCCCCGCCAAC ACTCTTCCTATCCAGCAGCCAGTTATACCTCCTGTTACCAACCCCTTACCAGAGGCGCAACCTTTACCTACCTTAGATGC CTCATCAACTCCCCGCTTACAACCCTTGCCGCAAGGGACAGCAACTCTGCCCCCAGCTAGCAACCAAATCAAACCCTCAG CAGATGGACTGTACCATATAGTGATAGACAATCAAGGAGCTAATGCCCTGACTGCGGCACGCCAAGTAGTTCCCGATGCT TACTTGTCAAGAAACAGCACGTTAATCTATCTGGCTACAGTCAAGACAAAAGAAGAGGCAGAGCAAAGGTTAAAACAGCT ACAGGCTAAGGGGATTAAAGCACGCCTACAGCAGCCATAG
Upstream 100 bases:
>100_bases GAGATGTAACGCGAACACCACCTAACTGGCTCAACTTTTCCAGATAAATTTTGAATTGTTAATTCCCCACTCCCCCTTGA CAAAATGAGGTACAGAGGCA
Downstream 100 bases:
>100_bases GTTGCAAAAATTTACGATAGGATTAAGGAATAGGAAACAAAAAAGACTGGATATGAGGTGTGGGGCATTTTTTCGTGCTA ACGCCAGCAAAACTCAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSQKPLIDSSTGLKQPLVAALASLEVQLEQELARYRRTRMGIRANSPSRVNSYVHNYPQELTDQNATMAHTQPLTVESKY QAKPLSLPASPEEKTASIIIKSPVHDKNPTPSAENISSPPRLNPYTPTTVAKTETPNNAPLDTTPEGNTQIPLPPANSTD TSSIVPAIAQGSQSEKLLANDTPAQPNDYLESSEALLRSLTDEQSETSQTNNSSDSLLSPLGIGSMLLLLVASLTLGYVV FNPKTLPQLNFGRLFNGNSSPTTENPPEVANNPPSQSQPELTSIPKYPDLTAREFPELRNPIDVVGLKPKVQPTPIAPAN TLPIQQPVIPPVTNPLPEAQPLPTLDASSTPRLQPLPQGTATLPPASNQIKPSADGLYHIVIDNQGANALTAARQVVPDA YLSRNSTLIYLATVKTKEEAEQRLKQLQAKGIKARLQQP
Sequences:
>Translated_439_residues MSQKPLIDSSTGLKQPLVAALASLEVQLEQELARYRRTRMGIRANSPSRVNSYVHNYPQELTDQNATMAHTQPLTVESKY QAKPLSLPASPEEKTASIIIKSPVHDKNPTPSAENISSPPRLNPYTPTTVAKTETPNNAPLDTTPEGNTQIPLPPANSTD TSSIVPAIAQGSQSEKLLANDTPAQPNDYLESSEALLRSLTDEQSETSQTNNSSDSLLSPLGIGSMLLLLVASLTLGYVV FNPKTLPQLNFGRLFNGNSSPTTENPPEVANNPPSQSQPELTSIPKYPDLTAREFPELRNPIDVVGLKPKVQPTPIAPAN TLPIQQPVIPPVTNPLPEAQPLPTLDASSTPRLQPLPQGTATLPPASNQIKPSADGLYHIVIDNQGANALTAARQVVPDA YLSRNSTLIYLATVKTKEEAEQRLKQLQAKGIKARLQQP >Mature_438_residues SQKPLIDSSTGLKQPLVAALASLEVQLEQELARYRRTRMGIRANSPSRVNSYVHNYPQELTDQNATMAHTQPLTVESKYQ AKPLSLPASPEEKTASIIIKSPVHDKNPTPSAENISSPPRLNPYTPTTVAKTETPNNAPLDTTPEGNTQIPLPPANSTDT SSIVPAIAQGSQSEKLLANDTPAQPNDYLESSEALLRSLTDEQSETSQTNNSSDSLLSPLGIGSMLLLLVASLTLGYVVF NPKTLPQLNFGRLFNGNSSPTTENPPEVANNPPSQSQPELTSIPKYPDLTAREFPELRNPIDVVGLKPKVQPTPIAPANT LPIQQPVIPPVTNPLPEAQPLPTLDASSTPRLQPLPQGTATLPPASNQIKPSADGLYHIVIDNQGANALTAARQVVPDAY LSRNSTLIYLATVKTKEEAEQRLKQLQAKGIKARLQQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47268; Mature: 47137
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKPLIDSSTGLKQPLVAALASLEVQLEQELARYRRTRMGIRANSPSRVNSYVHNYPQE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH LTDQNATMAHTQPLTVESKYQAKPLSLPASPEEKTASIIIKSPVHDKNPTPSAENISSPP HCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCC RLNPYTPTTVAKTETPNNAPLDTTPEGNTQIPLPPANSTDTSSIVPAIAQGSQSEKLLAN CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECC DTPAQPNDYLESSEALLRSLTDEQSETSQTNNSSDSLLSPLGIGSMLLLLVASLTLGYVV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE FNPKTLPQLNFGRLFNGNSSPTTENPPEVANNPPSQSQPELTSIPKYPDLTAREFPELRN ECCCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCC PIDVVGLKPKVQPTPIAPANTLPIQQPVIPPVTNPLPEAQPLPTLDASSTPRLQPLPQGT CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATLPPASNQIKPSADGLYHIVIDNQGANALTAARQVVPDAYLSRNSTLIYLATVKTKEEA CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH EQRLKQLQAKGIKARLQQP HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQKPLIDSSTGLKQPLVAALASLEVQLEQELARYRRTRMGIRANSPSRVNSYVHNYPQE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH LTDQNATMAHTQPLTVESKYQAKPLSLPASPEEKTASIIIKSPVHDKNPTPSAENISSPP HCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCC RLNPYTPTTVAKTETPNNAPLDTTPEGNTQIPLPPANSTDTSSIVPAIAQGSQSEKLLAN CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECC DTPAQPNDYLESSEALLRSLTDEQSETSQTNNSSDSLLSPLGIGSMLLLLVASLTLGYVV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE FNPKTLPQLNFGRLFNGNSSPTTENPPEVANNPPSQSQPELTSIPKYPDLTAREFPELRN ECCCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCC PIDVVGLKPKVQPTPIAPANTLPIQQPVIPPVTNPLPEAQPLPTLDASSTPRLQPLPQGT CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATLPPASNQIKPSADGLYHIVIDNQGANALTAARQVVPDAYLSRNSTLIYLATVKTKEEA CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH EQRLKQLQAKGIKARLQQP HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA