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The map label for this gene is pspA [C]

Identifier: 17229835

GI number: 17229835

Start: 2825564

End: 2826388

Strand: Reverse

Name: pspA [C]

Synonym: all2343

Alternate gene names: 17229835

Gene position: 2826388-2825564 (Counterclockwise)

Preceding gene: 17229836

Following gene: 17229834

Centisome position: 44.07

GC content: 44.24

Gene sequence:

>825_bases
GTGCTTGCACACTTCTGCAAAATTAATTTCTTGAATTTTGTTGGCGCAAGTTTTACCGTAGGCTATGCAAGAATTTCCTT
ATTGGGGTTGACTGGCAAAAGTGAATGGAGAGCCGAAATGGAACTGATTAAGCGTATCCAAAGGGTGATTAGCGCTAACT
TCAATAGTGTGGTAGCCAGCAAAGAAGATCCAGAAAAAATTCTGGAACAAGCTGTCATGGAAATGCAGGATAACTTGCTG
CAATTGCGACAGGGAGTAGCACAGGCGATCGCCACCCAAAAACGCACTGAACGCCAAGCCGCATCTGCCCAGTCCACCGC
AGAAGAATGGTATCGCCGCGCTCAATTAGCACTACAACAAGGTAATGAACCTCTGGCGAGAGAAGCCTTGACCAAACGCC
AGTCTTATGTAGATGCGGCTAAGACCTTCTCAAGTCAAATAGGAGAGCAAATCGAGATAGTAGATAGACTGAAAAAAGAT
ATGCGCTCACTAGAGTTAAAAATTGCCGAGGCGAAGACTAAAAAAGATATGTATATCGCTCGCGCTCGTTCAGCAGAAGC
ATCTTACAAACTTCAAGAAATGTTAAGTGGAGGTTCAGCCACTAGCAGCTTGAGTGCTTTTGAGCGGATGGAGGAAAAAG
TTTTGCAAATAGAAGCAAAATCAGAACTCATCACTCAAATGGGTAGCGACGACTTGCAAAAACAATTCGATTCTCTAGAA
GCGGCTAACGATGTTGATAGTCAACTAGCAGCAATGAAAACCCAAGCCTTAAGCGCAGGAGAAAATACCCCTCAGCAGCA
ACTACCTCAAGGCGAAAACTATTAA

Upstream 100 bases:

>100_bases
GGAATAGGAAACAAAAAAGACTGGATATGAGGTGTGGGGCATTTTTTCGTGCTAACGCCAGCAAAACTCAAATGTGATAC
CTCTAGCTTGCCTACTAACC

Downstream 100 bases:

>100_bases
AATTTAGTTAATTACCAACTCTAGGATATATCTTAACTATTAACGGGTGTCGGGACTGACTGAAGCCAACCGGAAAGATT
ACATTGAAAGTGGAAGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLAHFCKINFLNFVGASFTVGYARISLLGLTGKSEWRAEMELIKRIQRVISANFNSVVASKEDPEKILEQAVMEMQDNLL
QLRQGVAQAIATQKRTERQAASAQSTAEEWYRRAQLALQQGNEPLAREALTKRQSYVDAAKTFSSQIGEQIEIVDRLKKD
MRSLELKIAEAKTKKDMYIARARSAEASYKLQEMLSGGSATSSLSAFERMEEKVLQIEAKSELITQMGSDDLQKQFDSLE
AANDVDSQLAAMKTQALSAGENTPQQQLPQGENY

Sequences:

>Translated_274_residues
MLAHFCKINFLNFVGASFTVGYARISLLGLTGKSEWRAEMELIKRIQRVISANFNSVVASKEDPEKILEQAVMEMQDNLL
QLRQGVAQAIATQKRTERQAASAQSTAEEWYRRAQLALQQGNEPLAREALTKRQSYVDAAKTFSSQIGEQIEIVDRLKKD
MRSLELKIAEAKTKKDMYIARARSAEASYKLQEMLSGGSATSSLSAFERMEEKVLQIEAKSELITQMGSDDLQKQFDSLE
AANDVDSQLAAMKTQALSAGENTPQQQLPQGENY
>Mature_274_residues
MLAHFCKINFLNFVGASFTVGYARISLLGLTGKSEWRAEMELIKRIQRVISANFNSVVASKEDPEKILEQAVMEMQDNLL
QLRQGVAQAIATQKRTERQAASAQSTAEEWYRRAQLALQQGNEPLAREALTKRQSYVDAAKTFSSQIGEQIEIVDRLKKD
MRSLELKIAEAKTKKDMYIARARSAEASYKLQEMLSGGSATSSLSAFERMEEKVLQIEAKSELITQMGSDDLQKQFDSLE
AANDVDSQLAAMKTQALSAGENTPQQQLPQGENY

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=216, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 30609; Mature: 30609

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAHFCKINFLNFVGASFTVGYARISLLGLTGKSEWRAEMELIKRIQRVISANFNSVVAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCC
KEDPEKILEQAVMEMQDNLLQLRQGVAQAIATQKRTERQAASAQSTAEEWYRRAQLALQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GNEPLAREALTKRQSYVDAAKTFSSQIGEQIEIVDRLKKDMRSLELKIAEAKTKKDMYIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RARSAEASYKLQEMLSGGSATSSLSAFERMEEKVLQIEAKSELITQMGSDDLQKQFDSLE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AANDVDSQLAAMKTQALSAGENTPQQQLPQGENY
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLAHFCKINFLNFVGASFTVGYARISLLGLTGKSEWRAEMELIKRIQRVISANFNSVVAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCC
KEDPEKILEQAVMEMQDNLLQLRQGVAQAIATQKRTERQAASAQSTAEEWYRRAQLALQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GNEPLAREALTKRQSYVDAAKTFSSQIGEQIEIVDRLKKDMRSLELKIAEAKTKKDMYIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RARSAEASYKLQEMLSGGSATSSLSAFERMEEKVLQIEAKSELITQMGSDDLQKQFDSLE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AANDVDSQLAAMKTQALSAGENTPQQQLPQGENY
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]