| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is menB [H]
Identifier: 17229839
GI number: 17229839
Start: 2829448
End: 2830281
Strand: Reverse
Name: menB [H]
Synonym: all2347
Alternate gene names: 17229839
Gene position: 2830281-2829448 (Counterclockwise)
Preceding gene: 17229841
Following gene: 17229836
Centisome position: 44.13
GC content: 44.24
Gene sequence:
>834_bases ATGCAAATCGATTGGCAATCTACCAAAACCTACGAAGACATCCTTTATGACAAAGCTGATGGTATGGCTAAAATTACCAT CAACCGTCCTCACAAACGCAATGCTTTTCGTCCCAAAACTGTTTTTGAACTGTATGACGCTTTCTGTGATGCTCGTGAAG ATACGAGTATTGGCGTAGTTCTCTTTACTGGTGCTGGCCCCCATACTGATGGTAAATATGCCTTCTGTTCAGGTGGAGAC CAAAGCGTGCGGGGGCAAGCTGGCTATGTAGATGATGCTGGCATTCCCCGATTAAATGTGCTGGATTTACAACGCCTGAT TCGTTCCATGCCAAAAGTGGTAATTGCCTTAGTAGCTGGATATGCGATCGGTGGTGGACACGTCCTACACTTAATTTGTG ACCTCACGATCGCTGCTGATAATGCTATTTTTGGGCAGACTGGCCCCAAAGTGGGCAGTTTTGATGGTGGTTTTGGCGCT AGCTATCTCGCCCGGATTGTCGGACAGAAAAAAGCACGAGAAATTTGGTTTCTCTGTCGTCAATATGATGCTCAACAAGC TTTAGAAATGGGTTTAGTAAATTGCGTTGTGCCGATAGAGCAACTAGAAGCAGAAGGAATTAAATGGGCTGGAGAAATTT TAGAAAAAAGCCCTATTGCCATTCGCTGTCTCAAAGCAGCCTTTAATGCTGATTGTGATGGACAAGCAGGTTTACAAGAA CTAGCTGGTAATGCCACCTTACTTTATTACATGACAGAAGAAGGTGCTGAAGGTAAACAAGCTTTTTTGGAAAAACGTCC ACCAAATTTTCGAGACTTTCCTTGGCTACCGTGA
Upstream 100 bases:
>100_bases GGATGTCTACCTGCTGTTGCTGGACTGGGGTGCTAAATATTAGCGATCGCAACTCCCCACCTCTGCGATAAAATTCTCAA GCACAACAGCTATAATTCCC
Downstream 100 bases:
>100_bases TCGGGTATTAAAGATTAGGTATTGGGTATTGGAAAAATTAATTAGTCACCAGTCCCCAACTCCTAATCTCCAGACCCCAA CTATAAATCTTAAAAGGCAA
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MQIDWQSTKTYEDILYDKADGMAKITINRPHKRNAFRPKTVFELYDAFCDAREDTSIGVVLFTGAGPHTDGKYAFCSGGD QSVRGQAGYVDDAGIPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLICDLTIAADNAIFGQTGPKVGSFDGGFGA SYLARIVGQKKAREIWFLCRQYDAQQALEMGLVNCVVPIEQLEAEGIKWAGEILEKSPIAIRCLKAAFNADCDGQAGLQE LAGNATLLYYMTEEGAEGKQAFLEKRPPNFRDFPWLP
Sequences:
>Translated_277_residues MQIDWQSTKTYEDILYDKADGMAKITINRPHKRNAFRPKTVFELYDAFCDAREDTSIGVVLFTGAGPHTDGKYAFCSGGD QSVRGQAGYVDDAGIPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLICDLTIAADNAIFGQTGPKVGSFDGGFGA SYLARIVGQKKAREIWFLCRQYDAQQALEMGLVNCVVPIEQLEAEGIKWAGEILEKSPIAIRCLKAAFNADCDGQAGLQE LAGNATLLYYMTEEGAEGKQAFLEKRPPNFRDFPWLP >Mature_277_residues MQIDWQSTKTYEDILYDKADGMAKITINRPHKRNAFRPKTVFELYDAFCDAREDTSIGVVLFTGAGPHTDGKYAFCSGGD QSVRGQAGYVDDAGIPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLICDLTIAADNAIFGQTGPKVGSFDGGFGA SYLARIVGQKKAREIWFLCRQYDAQQALEMGLVNCVVPIEQLEAEGIKWAGEILEKSPIAIRCLKAAFNADCDGQAGLQE LAGNATLLYYMTEEGAEGKQAFLEKRPPNFRDFPWLP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=274, Percent_Identity=31.3868613138686, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI31542718, Length=256, Percent_Identity=29.296875, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4502327, Length=264, Percent_Identity=28.4090909090909, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI213417737, Length=226, Percent_Identity=24.7787610619469, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI157694516, Length=226, Percent_Identity=24.7787610619469, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1788597, Length=278, Percent_Identity=67.9856115107914, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI1787659, Length=266, Percent_Identity=31.5789473684211, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI221142681, Length=267, Percent_Identity=29.9625468164794, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082183, Length=175, Percent_Identity=33.7142857142857, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1787660, Length=270, Percent_Identity=30, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788682, Length=212, Percent_Identity=27.8301886792453, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25145438, Length=254, Percent_Identity=31.8897637795276, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17554946, Length=278, Percent_Identity=30.5755395683453, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17540714, Length=226, Percent_Identity=27.8761061946903, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17549921, Length=212, Percent_Identity=29.2452830188679, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560910, Length=200, Percent_Identity=29.5, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17534483, Length=264, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17535521, Length=212, Percent_Identity=27.3584905660377, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17536985, Length=224, Percent_Identity=26.7857142857143, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI20129971, Length=273, Percent_Identity=31.5018315018315, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24653477, Length=273, Percent_Identity=31.5018315018315, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24653139, Length=272, Percent_Identity=27.9411764705882, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI21357171, Length=191, Percent_Identity=30.3664921465969, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI19922422, Length=281, Percent_Identity=25.2669039145907, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24654903, Length=199, Percent_Identity=27.1356783919598, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 30359; Mature: 30359
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIDWQSTKTYEDILYDKADGMAKITINRPHKRNAFRPKTVFELYDAFCDAREDTSIGVV CCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE LFTGAGPHTDGKYAFCSGGDQSVRGQAGYVDDAGIPRLNVLDLQRLIRSMPKVVIALVAG EEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YAIGGGHVLHLICDLTIAADNAIFGQTGPKVGSFDGGFGASYLARIVGQKKAREIWFLCR HCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH QYDAQQALEMGLVNCVVPIEQLEAEGIKWAGEILEKSPIAIRCLKAAFNADCDGQAGLQE HHCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH LAGNATLLYYMTEEGAEGKQAFLEKRPPNFRDFPWLP HCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQIDWQSTKTYEDILYDKADGMAKITINRPHKRNAFRPKTVFELYDAFCDAREDTSIGVV CCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE LFTGAGPHTDGKYAFCSGGDQSVRGQAGYVDDAGIPRLNVLDLQRLIRSMPKVVIALVAG EEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YAIGGGHVLHLICDLTIAADNAIFGQTGPKVGSFDGGFGASYLARIVGQKKAREIWFLCR HCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH QYDAQQALEMGLVNCVVPIEQLEAEGIKWAGEILEKSPIAIRCLKAAFNADCDGQAGLQE HHCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH LAGNATLLYYMTEEGAEGKQAFLEKRPPNFRDFPWLP HCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1629163; 8566759; 9387221; 9384377 [H]