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The map label for this gene is yfiY [H]

Identifier: 17229705

GI number: 17229705

Start: 2655775

End: 2656752

Strand: Direct

Name: yfiY [H]

Synonym: alr2213

Alternate gene names: 17229705

Gene position: 2655775-2656752 (Clockwise)

Preceding gene: 17229704

Following gene: 17229706

Centisome position: 41.41

GC content: 33.64

Gene sequence:

>978_bases
ATGAAACAGTTTTTACATCGTTATATCAAGTTATTTATTCTCATACCCCTAACTTTAGTTTTGGTTAATAGTTGTTATAT
TAATTATCCTGAAAATTCCGGCTTGATAACGACAAGAATAAAAACATCTGAGTGTAGACTAATCAAACATCCTTTAGGTG
AAAGCTGCGTTCCTGTAAAACCTCAGCGCGTTATTGCTTTAGATGAAACCTCTATGGAAGCATTGTTAGCACTGGACTTA
AAACCAATAGCTACAGCACAGCCTAATATTGCAGGTAGCATAATACAAAAGTTGGGTAAAAAAGCTGAAGGTATAGTTTC
TTTAGGGAAAGATGGTCAGCCAAATATAGAAAAAATGGTGCAATTAAATCCAGATTTAATTTTGGGTTTTTCTGTGAGCG
CAGAACAATACAAATTATTTTCCCAAATAGCACCGACAGTTACACTTGATTATATTCAATTTGCTTGGAAAGATGCTTTA
TCACGTATTGCTGAAATCATAGATAAAAGTGAACAAGCAAAAATATTACTTGAGCAATATCAGCAAAGAGTTAAAGAATT
ACGCACCTTTATAAATTATAATCTCAAAGAAAAAACTGTTTCGGTGAGTCGCTTTTATGCTGGTAATCAAGTTCCAGAGT
TTCGTACTAAATATTCATTTCCTGGAAGTTTACTTACAGAAGTGAGAATACCTGTACCAGAGATGCAAAATCAACTGACT
ACTAATGAAAATCAGCCTTTAGTTTCAGTTAGTTTAGAGCGTTTAGAGTTATTAGATGCAGATGTTTTATTTGTAGCTTT
AGACCCTGGTGCAGAAGAGTCATTTCAAAAATATCAAAACACTCCTTTATGGCAAAAGCTAGATGTCGTGAAAAATCAGC
GCGTGTATGCGGTTGATTCTGGTTACTGGATATTTGGCAATATTCTATCAGCTAATGCCATTTTAGATGACCTATTTAAA
TACTTAGTAGGAAAATAA

Upstream 100 bases:

>100_bases
TGATTCTGGTTACTGGATTTTTGGAAATATTTTGTCAGCTAATGCTATTTTAGATGACATCGTTAAATATTTAGTGGAAT
AATTAATTTAATATCTAATA

Downstream 100 bases:

>100_bases
TGTTGCAACAAATAACTAACAATAGTGTACAAAATTTCTTACAGGAAGTATTTACTCTTGCTCAAAATACTTTAGATAGT
TTCTATACGGACTGCATAAT

Product: iron(III) dicitrate-binding periplasmic protein of ABC transporter

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKQFLHRYIKLFILIPLTLVLVNSCYINYPENSGLITTRIKTSECRLIKHPLGESCVPVKPQRVIALDETSMEALLALDL
KPIATAQPNIAGSIIQKLGKKAEGIVSLGKDGQPNIEKMVQLNPDLILGFSVSAEQYKLFSQIAPTVTLDYIQFAWKDAL
SRIAEIIDKSEQAKILLEQYQQRVKELRTFINYNLKEKTVSVSRFYAGNQVPEFRTKYSFPGSLLTEVRIPVPEMQNQLT
TNENQPLVSVSLERLELLDADVLFVALDPGAEESFQKYQNTPLWQKLDVVKNQRVYAVDSGYWIFGNILSANAILDDLFK
YLVGK

Sequences:

>Translated_325_residues
MKQFLHRYIKLFILIPLTLVLVNSCYINYPENSGLITTRIKTSECRLIKHPLGESCVPVKPQRVIALDETSMEALLALDL
KPIATAQPNIAGSIIQKLGKKAEGIVSLGKDGQPNIEKMVQLNPDLILGFSVSAEQYKLFSQIAPTVTLDYIQFAWKDAL
SRIAEIIDKSEQAKILLEQYQQRVKELRTFINYNLKEKTVSVSRFYAGNQVPEFRTKYSFPGSLLTEVRIPVPEMQNQLT
TNENQPLVSVSLERLELLDADVLFVALDPGAEESFQKYQNTPLWQKLDVVKNQRVYAVDSGYWIFGNILSANAILDDLFK
YLVGK
>Mature_325_residues
MKQFLHRYIKLFILIPLTLVLVNSCYINYPENSGLITTRIKTSECRLIKHPLGESCVPVKPQRVIALDETSMEALLALDL
KPIATAQPNIAGSIIQKLGKKAEGIVSLGKDGQPNIEKMVQLNPDLILGFSVSAEQYKLFSQIAPTVTLDYIQFAWKDAL
SRIAEIIDKSEQAKILLEQYQQRVKELRTFINYNLKEKTVSVSRFYAGNQVPEFRTKYSFPGSLLTEVRIPVPEMQNQLT
TNENQPLVSVSLERLELLDADVLFVALDPGAEESFQKYQNTPLWQKLDVVKNQRVYAVDSGYWIFGNILSANAILDDLFK
YLVGK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=266, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36800; Mature: 36800

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFLHRYIKLFILIPLTLVLVNSCYINYPENSGLITTRIKTSECRLIKHPLGESCVPVK
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCHHHHHCCCCCCCCCCC
PQRVIALDETSMEALLALDLKPIATAQPNIAGSIIQKLGKKAEGIVSLGKDGQPNIEKMV
CCEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHEECCCCCCCCHHHHH
QLNPDLILGFSVSAEQYKLFSQIAPTVTLDYIQFAWKDALSRIAEIIDKSEQAKILLEQY
HCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QQRVKELRTFINYNLKEKTVSVSRFYAGNQVPEFRTKYSFPGSLLTEVRIPVPEMQNQLT
HHHHHHHHHHHCCCCHHHHEEHHHHHCCCCCCCHHHCCCCCCHHHHHCCCCCHHHHHHHC
TNENQPLVSVSLERLELLDADVLFVALDPGAEESFQKYQNTPLWQKLDVVKNQRVYAVDS
CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHCCCEEEEEEC
GYWIFGNILSANAILDDLFKYLVGK
CCEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQFLHRYIKLFILIPLTLVLVNSCYINYPENSGLITTRIKTSECRLIKHPLGESCVPVK
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCHHHHHCCCCCCCCCCC
PQRVIALDETSMEALLALDLKPIATAQPNIAGSIIQKLGKKAEGIVSLGKDGQPNIEKMV
CCEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHEECCCCCCCCHHHHH
QLNPDLILGFSVSAEQYKLFSQIAPTVTLDYIQFAWKDALSRIAEIIDKSEQAKILLEQY
HCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QQRVKELRTFINYNLKEKTVSVSRFYAGNQVPEFRTKYSFPGSLLTEVRIPVPEMQNQLT
HHHHHHHHHHHCCCCHHHHEEHHHHHCCCCCCCHHHCCCCCCHHHHHCCCCCHHHHHHHC
TNENQPLVSVSLERLELLDADVLFVALDPGAEESFQKYQNTPLWQKLDVVKNQRVYAVDS
CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHCCCEEEEEEC
GYWIFGNILSANAILDDLFKYLVGK
CCEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]