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The map label for this gene is yfiY [H]

Identifier: 17229704

GI number: 17229704

Start: 2654776

End: 2655756

Strand: Direct

Name: yfiY [H]

Synonym: alr2212

Alternate gene names: 17229704

Gene position: 2654776-2655756 (Clockwise)

Preceding gene: 17229703

Following gene: 17229705

Centisome position: 41.39

GC content: 28.85

Gene sequence:

>981_bases
ATGAAACCTAAATATCGATACAAGTATATAAAACTACTCTTAGTAATTACTTTAACCATAGTATTTTTTAAAGGGTGTCA
TAGCTTTTTAACACAAAATATATATTCATCAAATGAATATGTAAAATCAACAGAATGTCGAATAATTAAACATAAATTAG
GCGAAATTTGTATTCCTCTTAATCCGCAACGCATTATTGTGACTGACCCAGAAAATTTAGAGATATTATTAGCATTAGGT
ATAAAGCCAATAGCATCAGCAAGAGCAAATGCAGTAGGTAATAAAGTCAACATATTAGATAAGGATAAAGTTGATGGGAT
TATTAATTTAGGAAAAGAAAGCCAAATAAATCTTGAAAGGATTATCCAGCTAAACCCAGATTTAATTCTAGGTTTTTCAT
ACAGTTCTCAAGATTATAAATTACTTTCACAAATAGCTCCTACAGCTTATTTTAATTATACAGAAACAGACTGGAAAAAA
ACTTTACTAGAAGTTGCAGAAGTAGTTAATAAAACAAAAAAGGCGGAAAAATTATTAGAAGAATATCAACACAGAATTGA
AGATTTAAAATTAAAATTTACTCAAAAAAATAAAAACACAAAAATTTCTGTAATGCGATTTTATACAACTATTCAATTTA
CACAATTTTTGAATGAGTTATCGTTTCCTGTCAGCATTTTAGAGGAATTGAAATTATCTATCCCTCTGGCACAACGGCAA
GTTAGTAGAGGTGCAAATGTCAGTTATAACAATGTTAGTTTAGAACGTGTAGATTTACTAGAATCAGACGCGATGTTTAT
CGCATTAGATCCAGGTGCAGAAGAAAATTTTCAAACATATCAGAATAGTCCTCTATGGCAAACACTAAATGTAGTAAAAA
ATAACCATGTATATACCGTTGATTCTGGTTACTGGATTTTTGGAAATATTTTGTCAGCTAATGCTATTTTAGATGACATC
GTTAAATATTTAGTGGAATAA

Upstream 100 bases:

>100_bases
GAACAATTTCTTTTGAGTTTTGATCTAGTTCATGAAACATACACAGCCCTTAAATTAAATTAGGGCTGTTTCATATCCAA
ACTTCTTATGACAGCAGAAA

Downstream 100 bases:

>100_bases
TTAATTTAATATCTAATAATGAAACAGTTTTTACATCGTTATATCAAGTTATTTATTCTCATACCCCTAACTTTAGTTTT
GGTTAATAGTTGTTATATTA

Product: iron(III) dicitrate-binding periplasmic protein of ABC transporter

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKPKYRYKYIKLLLVITLTIVFFKGCHSFLTQNIYSSNEYVKSTECRIIKHKLGEICIPLNPQRIIVTDPENLEILLALG
IKPIASARANAVGNKVNILDKDKVDGIINLGKESQINLERIIQLNPDLILGFSYSSQDYKLLSQIAPTAYFNYTETDWKK
TLLEVAEVVNKTKKAEKLLEEYQHRIEDLKLKFTQKNKNTKISVMRFYTTIQFTQFLNELSFPVSILEELKLSIPLAQRQ
VSRGANVSYNNVSLERVDLLESDAMFIALDPGAEENFQTYQNSPLWQTLNVVKNNHVYTVDSGYWIFGNILSANAILDDI
VKYLVE

Sequences:

>Translated_326_residues
MKPKYRYKYIKLLLVITLTIVFFKGCHSFLTQNIYSSNEYVKSTECRIIKHKLGEICIPLNPQRIIVTDPENLEILLALG
IKPIASARANAVGNKVNILDKDKVDGIINLGKESQINLERIIQLNPDLILGFSYSSQDYKLLSQIAPTAYFNYTETDWKK
TLLEVAEVVNKTKKAEKLLEEYQHRIEDLKLKFTQKNKNTKISVMRFYTTIQFTQFLNELSFPVSILEELKLSIPLAQRQ
VSRGANVSYNNVSLERVDLLESDAMFIALDPGAEENFQTYQNSPLWQTLNVVKNNHVYTVDSGYWIFGNILSANAILDDI
VKYLVE
>Mature_326_residues
MKPKYRYKYIKLLLVITLTIVFFKGCHSFLTQNIYSSNEYVKSTECRIIKHKLGEICIPLNPQRIIVTDPENLEILLALG
IKPIASARANAVGNKVNILDKDKVDGIINLGKESQINLERIIQLNPDLILGFSYSSQDYKLLSQIAPTAYFNYTETDWKK
TLLEVAEVVNKTKKAEKLLEEYQHRIEDLKLKFTQKNKNTKISVMRFYTTIQFTQFLNELSFPVSILEELKLSIPLAQRQ
VSRGANVSYNNVSLERVDLLESDAMFIALDPGAEENFQTYQNSPLWQTLNVVKNNHVYTVDSGYWIFGNILSANAILDDI
VKYLVE

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=327, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1786346, Length=267, Percent_Identity=22.0973782771536, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 37427; Mature: 37427

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKYRYKYIKLLLVITLTIVFFKGCHSFLTQNIYSSNEYVKSTECRIIKHKLGEICIPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCEEECC
NPQRIIVTDPENLEILLALGIKPIASARANAVGNKVNILDKDKVDGIINLGKESQINLER
CCCEEEEECCCCCEEEEEECCCHHHHHHHHHCCCEEEECCCCCCCHHEECCCCCCCCHHH
IIQLNPDLILGFSYSSQDYKLLSQIAPTAYFNYTETDWKKTLLEVAEVVNKTKKAEKLLE
HEECCCCEEEEECCCCCHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EYQHRIEDLKLKFTQKNKNTKISVMRFYTTIQFTQFLNELSFPVSILEELKLSIPLAQRQ
HHHHHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHH
VSRGANVSYNNVSLERVDLLESDAMFIALDPGAEENFQTYQNSPLWQTLNVVKNNHVYTV
HHCCCCCEECCEEHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHHCCCEEEEE
DSGYWIFGNILSANAILDDIVKYLVE
CCCCEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPKYRYKYIKLLLVITLTIVFFKGCHSFLTQNIYSSNEYVKSTECRIIKHKLGEICIPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCEEECC
NPQRIIVTDPENLEILLALGIKPIASARANAVGNKVNILDKDKVDGIINLGKESQINLER
CCCEEEEECCCCCEEEEEECCCHHHHHHHHHCCCEEEECCCCCCCHHEECCCCCCCCHHH
IIQLNPDLILGFSYSSQDYKLLSQIAPTAYFNYTETDWKKTLLEVAEVVNKTKKAEKLLE
HEECCCCEEEEECCCCCHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EYQHRIEDLKLKFTQKNKNTKISVMRFYTTIQFTQFLNELSFPVSILEELKLSIPLAQRQ
HHHHHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHH
VSRGANVSYNNVSLERVDLLESDAMFIALDPGAEENFQTYQNSPLWQTLNVVKNNHVYTV
HHCCCCCEECCEEHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHHCCCEEEEE
DSGYWIFGNILSANAILDDIVKYLVE
CCCCEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]