| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229706
Identifier: 17229706
GI number: 17229706
Start: 2656752
End: 2657630
Strand: Direct
Name: 17229706
Synonym: alr2214
Alternate gene names: NA
Gene position: 2656752-2657630 (Clockwise)
Preceding gene: 17229705
Following gene: 17229707
Centisome position: 41.42
GC content: 37.32
Gene sequence:
>879_bases ATGTTGCAACAAATAACTAACAATAGTGTACAAAATTTCTTACAGGAAGTATTTACTCTTGCTCAAAATACTTTAGATAG TTTCTATACGGACTGCATAATTTTACCTCAGCCACCTGATGGTGTTGAGGTAATTTCATTAAATAATTATTTACAACCAG ATAGACTTTTATCTCAATGGCAAGCCAGCGATATATACCAAAAAACTCAAGATATTCGCATTGCTGCATCTATCTGGAAC AAAGTTTATAGCTGGACAACATTACCGGGTGTTTTAGCCTTGATGACTTGGGCTGGTGTCGGTTTAGATGCTGGGTTAGA TAATGTGAGTTTTGTATTAGAAGACGGTGAACCCAAAGCTTTATGGTTTAATGATTTGAGTGGTACTGTAATTTATCCTC AGAGATTACCTATCCCCATTCCTCAAGACTACCCTGGAAAAATAGTAAATAGTCTAGAAGGCTTACATCAAGCTGTATTT ACAGGCTTATTCCAGCGTAATGTAGCCCCAATGATAGACCATGTTCATCGCTTAACCAAACTCTCCAAAAAAACTATGTG GGGTAATGCGGTGAACGCCTCAGAAGGACTGTTTGCTGAAATTAATAAATGTACAAATTTAGAAGCAATACAAACAGATT ATTCCGTCTTGTATGAACAACCATACAGTTCAGTTATGCCGGGACGCAATTCCCTTTACAACTTAGTACGCACTGAACAA CTCAACGAACCCGGTTTACCAGCTACAACCACAGTCCGTCTTACCTGTTGTTTATATGCTTTTATTCCTCCATTTGATGA AAAGTGTACAAACTGTCCTCTATTAAAACCACAGGAACGAATTTCTCAAATAAGAGAATATATGAAAGAATCCGAGTGA
Upstream 100 bases:
>100_bases AGCGCGTGTATGCGGTTGATTCTGGTTACTGGATATTTGGCAATATTCTATCAGCTAATGCCATTTTAGATGACCTATTT AAATACTTAGTAGGAAAATA
Downstream 100 bases:
>100_bases AAGTATATTTTTTGGTGTTGCATACTTATGAGTGATTTTTATTTCGCAGAGGCGCAGAGAGTAAGAAAATTTTTATGCTA CAACAACCAAATCCAGCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MLQQITNNSVQNFLQEVFTLAQNTLDSFYTDCIILPQPPDGVEVISLNNYLQPDRLLSQWQASDIYQKTQDIRIAASIWN KVYSWTTLPGVLALMTWAGVGLDAGLDNVSFVLEDGEPKALWFNDLSGTVIYPQRLPIPIPQDYPGKIVNSLEGLHQAVF TGLFQRNVAPMIDHVHRLTKLSKKTMWGNAVNASEGLFAEINKCTNLEAIQTDYSVLYEQPYSSVMPGRNSLYNLVRTEQ LNEPGLPATTTVRLTCCLYAFIPPFDEKCTNCPLLKPQERISQIREYMKESE
Sequences:
>Translated_292_residues MLQQITNNSVQNFLQEVFTLAQNTLDSFYTDCIILPQPPDGVEVISLNNYLQPDRLLSQWQASDIYQKTQDIRIAASIWN KVYSWTTLPGVLALMTWAGVGLDAGLDNVSFVLEDGEPKALWFNDLSGTVIYPQRLPIPIPQDYPGKIVNSLEGLHQAVF TGLFQRNVAPMIDHVHRLTKLSKKTMWGNAVNASEGLFAEINKCTNLEAIQTDYSVLYEQPYSSVMPGRNSLYNLVRTEQ LNEPGLPATTTVRLTCCLYAFIPPFDEKCTNCPLLKPQERISQIREYMKESE >Mature_292_residues MLQQITNNSVQNFLQEVFTLAQNTLDSFYTDCIILPQPPDGVEVISLNNYLQPDRLLSQWQASDIYQKTQDIRIAASIWN KVYSWTTLPGVLALMTWAGVGLDAGLDNVSFVLEDGEPKALWFNDLSGTVIYPQRLPIPIPQDYPGKIVNSLEGLHQAVF TGLFQRNVAPMIDHVHRLTKLSKKTMWGNAVNASEGLFAEINKCTNLEAIQTDYSVLYEQPYSSVMPGRNSLYNLVRTEQ LNEPGLPATTTVRLTCCLYAFIPPFDEKCTNCPLLKPQERISQIREYMKESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32998; Mature: 32998
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQQITNNSVQNFLQEVFTLAQNTLDSFYTDCIILPQPPDGVEVISLNNYLQPDRLLSQW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEEECCCCCCHHHHHHHH QASDIYQKTQDIRIAASIWNKVYSWTTLPGVLALMTWAGVGLDAGLDNVSFVLEDGEPKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCE LWFNDLSGTVIYPQRLPIPIPQDYPGKIVNSLEGLHQAVFTGLFQRNVAPMIDHVHRLTK EEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LSKKTMWGNAVNASEGLFAEINKCTNLEAIQTDYSVLYEQPYSSVMPGRNSLYNLVRTEQ HHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH LNEPGLPATTTVRLTCCLYAFIPPFDEKCTNCPLLKPQERISQIREYMKESE CCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MLQQITNNSVQNFLQEVFTLAQNTLDSFYTDCIILPQPPDGVEVISLNNYLQPDRLLSQW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEEECCCCCCHHHHHHHH QASDIYQKTQDIRIAASIWNKVYSWTTLPGVLALMTWAGVGLDAGLDNVSFVLEDGEPKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCE LWFNDLSGTVIYPQRLPIPIPQDYPGKIVNSLEGLHQAVFTGLFQRNVAPMIDHVHRLTK EEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LSKKTMWGNAVNASEGLFAEINKCTNLEAIQTDYSVLYEQPYSSVMPGRNSLYNLVRTEQ HHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH LNEPGLPATTTVRLTCCLYAFIPPFDEKCTNCPLLKPQERISQIREYMKESE CCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA