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The map label for this gene is 17229468

Identifier: 17229468

GI number: 17229468

Start: 2363110

End: 2363475

Strand: Direct

Name: 17229468

Synonym: alr1976

Alternate gene names: NA

Gene position: 2363110-2363475 (Clockwise)

Preceding gene: 17229460

Following gene: 17229469

Centisome position: 36.84

GC content: 45.63

Gene sequence:

>366_bases
ATGGGAAGTTATCTAGATATAGAACGCTTGGCGAGCCTAGTTCGCAAAAAGCGAGGTAGTAGAGGGTTGCGAGAAACTTC
GGTAGAAATTGGGAATGTAAGTCCATCTACTCTATCAAGGGTAGAGAGCGGTAGAATGCCGGACATGGAAACATTTTTAG
CGCTTTGTAACTGGCTACAAGTACCACCTGCGGAGTTATTTAGAACTACGGAGGAGGATCAACCAGATACGCCTGAAGCG
ATCGCAATTCAATTACGAGCCGACAAAAAACTTGATCCAGCGATCGCCAATGCTTTAGCGTCCTTAGTCAAAGCAGCCTA
TCGAGACCTTTCGCAACAAGATGACGAATTGAAGCAAGACCCATAA

Upstream 100 bases:

>100_bases
TTTTTCATTCATGATACATTTGTTGCACATACCATACAGGATTATTTATGGTGTGTCAACTAAGAAACGATTGATTTTTA
CGTGACGCAAGGATAGGAGA

Downstream 100 bases:

>100_bases
CTATGTCATTAATTGAAAAACTGTCGACAGACTTTAGACAACGCTGTGAGGTAATCACTACTGAACAACGCAGCTTAATT
CAATTGAAAGCTTTTGAGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MGSYLDIERLASLVRKKRGSRGLRETSVEIGNVSPSTLSRVESGRMPDMETFLALCNWLQVPPAELFRTTEEDQPDTPEA
IAIQLRADKKLDPAIANALASLVKAAYRDLSQQDDELKQDP

Sequences:

>Translated_121_residues
MGSYLDIERLASLVRKKRGSRGLRETSVEIGNVSPSTLSRVESGRMPDMETFLALCNWLQVPPAELFRTTEEDQPDTPEA
IAIQLRADKKLDPAIANALASLVKAAYRDLSQQDDELKQDP
>Mature_120_residues
GSYLDIERLASLVRKKRGSRGLRETSVEIGNVSPSTLSRVESGRMPDMETFLALCNWLQVPPAELFRTTEEDQPDTPEAI
AIQLRADKKLDPAIANALASLVKAAYRDLSQQDDELKQDP

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13456; Mature: 13325

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSYLDIERLASLVRKKRGSRGLRETSVEIGNVSPSTLSRVESGRMPDMETFLALCNWLQ
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC
VPPAELFRTTEEDQPDTPEAIAIQLRADKKLDPAIANALASLVKAAYRDLSQQDDELKQD
CCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCC
P
C
>Mature Secondary Structure 
GSYLDIERLASLVRKKRGSRGLRETSVEIGNVSPSTLSRVESGRMPDMETFLALCNWLQ
CCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC
VPPAELFRTTEEDQPDTPEAIAIQLRADKKLDPAIANALASLVKAAYRDLSQQDDELKQD
CCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA