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The map label for this gene is tnpA1 [H]

Identifier: 17229177

GI number: 17229177

Start: 2010187

End: 2010585

Strand: Direct

Name: tnpA1 [H]

Synonym: alr1685

Alternate gene names: 17229177

Gene position: 2010187-2010585 (Clockwise)

Preceding gene: 17229172

Following gene: 17229179

Centisome position: 31.34

GC content: 41.1

Gene sequence:

>399_bases
ATGAGGCGAAAATATAAATTTAACAACAATGTAGTCTACTCTTGTAAATACCATATAGTTTGGACTCCCAAGTACAGACG
CAAGGTATTAAAAGATGGTGTTGATACACGGCTAAAAGAACTGTTACAACAAATAGCAGCAGAAATTCAGGTTGAGATTT
TGGAAATGGAGGTAGTAGAGGATCATGTCCACCTACTGATTGAGGTTGACCCGCAATTTGGTGTCCACAAGGCAATTAAA
CGGTTTAAAGGCGCAACGTCTCGTTACCTACGCTTAGAGTTTCCACACCTGAAACAAAGACTACCTACGCTGTGGACTAA
TTCTTACTTTGTCTCTACAGTCGGGGGCGCACCACTGGAGGCGGTTAAGGAGTACATTCAAAATCAGAAAAATACTTGA

Upstream 100 bases:

>100_bases
AGCTAAATCACTCATTTGTTGAGTGTTACCAATTTTTAGTTTTCTAACTGTATATTCACCCATAAAAAGATTATACAGCA
TAAGGCTATATAATTATTGC

Downstream 100 bases:

>100_bases
CGGCGATTTTAATCGCCTAGCAGCTTGCGCCGCATTGATTATCGGTCAGTGGTTAGTTGTCAGTTGTCAAAAGTGATTCT
CTCTTACACCCCTACACCCC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRRKYKFNNNVVYSCKYHIVWTPKYRRKVLKDGVDTRLKELLQQIAAEIQVEILEMEVVEDHVHLLIEVDPQFGVHKAIK
RFKGATSRYLRLEFPHLKQRLPTLWTNSYFVSTVGGAPLEAVKEYIQNQKNT

Sequences:

>Translated_132_residues
MRRKYKFNNNVVYSCKYHIVWTPKYRRKVLKDGVDTRLKELLQQIAAEIQVEILEMEVVEDHVHLLIEVDPQFGVHKAIK
RFKGATSRYLRLEFPHLKQRLPTLWTNSYFVSTVGGAPLEAVKEYIQNQKNT
>Mature_132_residues
MRRKYKFNNNVVYSCKYHIVWTPKYRRKVLKDGVDTRLKELLQQIAAEIQVEILEMEVVEDHVHLLIEVDPQFGVHKAIK
RFKGATSRYLRLEFPHLKQRLPTLWTNSYFVSTVGGAPLEAVKEYIQNQKNT

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 15629; Mature: 15629

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKYKFNNNVVYSCKYHIVWTPKYRRKVLKDGVDTRLKELLQQIAAEIQVEILEMEVVE
CCCCEECCCCEEEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHVHLLIEVDPQFGVHKAIKRFKGATSRYLRLEFPHLKQRLPTLWTNSYFVSTVGGAPLE
HHEEEEEEECCCCCHHHHHHHHCCCCCCEEEEECHHHHHHCCHHHCCCEEEEECCCCCHH
AVKEYIQNQKNT
HHHHHHHCCCCC
>Mature Secondary Structure
MRRKYKFNNNVVYSCKYHIVWTPKYRRKVLKDGVDTRLKELLQQIAAEIQVEILEMEVVE
CCCCEECCCCEEEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHVHLLIEVDPQFGVHKAIKRFKGATSRYLRLEFPHLKQRLPTLWTNSYFVSTVGGAPLE
HHEEEEEEECCCCCHHHHHHHHCCCCCCEEEEECHHHHHHCCHHHCCCEEEEECCCCCHH
AVKEYIQNQKNT
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]