| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229179
Identifier: 17229179
GI number: 17229179
Start: 2011721
End: 2012605
Strand: Direct
Name: 17229179
Synonym: alr1687
Alternate gene names: NA
Gene position: 2011721-2012605 (Clockwise)
Preceding gene: 17229177
Following gene: 17229181
Centisome position: 31.37
GC content: 44.18
Gene sequence:
>885_bases ATGTCACAAGACAATCTTCCCGAACAACCCAATCAACCGGAACCGACAGTTACGCCGGCCAATCAACCCCGCCAGAGGAG AGTCCCGCAGCCTCTTTGGAAGGCAGCAATTATCGGATTTCTGCGAGGTACAATTGGGATTTTAGAAACTACTGTAGAGA AACTGGAAACAGCACCGCCGCCGGGTACGGAAGCAACTCCCAGTTTTTTACAACAGCTAGAGTCCAGATGGGGTAGGTTT TTACTGAAAAGCCGTGCTTTTATCCCATCTAATTTATCAACCAAATTATCAGATACTGCATTGACGGGGATTATTGCTAG TATCGCTGTAGTTTTAGTGTGGACAACTACCAGTATTTTCTCTAACAAACCTACAGAAGTAGCAACACTTCCCCCTGTTG AGGAAGTTCCCACACCAACACCCACAATTTCTGCTCCACCAGAGCCAAGCTTACCAGAACCACCACCAACAGCAGAAATA ACTCCGGAACCAGAAACACAAATTCAGCCACCAGAACCAGAACCTACACCAGAACCTGAAGCCACTCCTACACCAACACC ACCAATACAATTAACCCCAGAACAAACCTTGATTGCAGCCATCGAAAATCAAGTGGCAGAAATTAGCAATCAAATCGCTT CTGGCATCATAAAATCAATTCAAGCCAATTTCCGCACCAGCAATTTGACCGTAAAAATCAATGACGATTGGTACACACTC AAAGAATCAGAGCAGAACCAAATAGCATCCCAAATCCTACAGCGTTCTCAAGAATTAGATTTTTCCCACTTAGAAATGGT TGATTCTCAAGATAAGTTAATAGCTCGTAACCCAGTTATTGGTAACGAAATGATTATTTTTCAACGACGGGTCGTCGGTC AGTAG
Upstream 100 bases:
>100_bases CGAAGCCATTACCCATGAAATGATACATTAGGGCAAAAGAGAAACAAGCAAAAAGATGCAGCTAGTTTGTCTTTGATTTG TTGGTTTTGGTAAAAGTTCC
Downstream 100 bases:
>100_bases AGACTTGTATGCAAAGTCTCTAGGCCCTAATTTCTTGATATGGTATCCACACGGTGAAAATTGAGCCAATACCTACAGTG GATTCAACTTCAATGCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSQDNLPEQPNQPEPTVTPANQPRQRRVPQPLWKAAIIGFLRGTIGILETTVEKLETAPPPGTEATPSFLQQLESRWGRF LLKSRAFIPSNLSTKLSDTALTGIIASIAVVLVWTTTSIFSNKPTEVATLPPVEEVPTPTPTISAPPEPSLPEPPPTAEI TPEPETQIQPPEPEPTPEPEATPTPTPPIQLTPEQTLIAAIENQVAEISNQIASGIIKSIQANFRTSNLTVKINDDWYTL KESEQNQIASQILQRSQELDFSHLEMVDSQDKLIARNPVIGNEMIIFQRRVVGQ
Sequences:
>Translated_294_residues MSQDNLPEQPNQPEPTVTPANQPRQRRVPQPLWKAAIIGFLRGTIGILETTVEKLETAPPPGTEATPSFLQQLESRWGRF LLKSRAFIPSNLSTKLSDTALTGIIASIAVVLVWTTTSIFSNKPTEVATLPPVEEVPTPTPTISAPPEPSLPEPPPTAEI TPEPETQIQPPEPEPTPEPEATPTPTPPIQLTPEQTLIAAIENQVAEISNQIASGIIKSIQANFRTSNLTVKINDDWYTL KESEQNQIASQILQRSQELDFSHLEMVDSQDKLIARNPVIGNEMIIFQRRVVGQ >Mature_293_residues SQDNLPEQPNQPEPTVTPANQPRQRRVPQPLWKAAIIGFLRGTIGILETTVEKLETAPPPGTEATPSFLQQLESRWGRFL LKSRAFIPSNLSTKLSDTALTGIIASIAVVLVWTTTSIFSNKPTEVATLPPVEEVPTPTPTISAPPEPSLPEPPPTAEIT PEPETQIQPPEPEPTPEPEATPTPTPPIQLTPEQTLIAAIENQVAEISNQIASGIIKSIQANFRTSNLTVKINDDWYTLK ESEQNQIASQILQRSQELDFSHLEMVDSQDKLIARNPVIGNEMIIFQRRVVGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32312; Mature: 32181
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDNLPEQPNQPEPTVTPANQPRQRRVPQPLWKAAIIGFLRGTIGILETTVEKLETAPP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGTEATPSFLQQLESRWGRFLLKSRAFIPSNLSTKLSDTALTGIIASIAVVLVWTTTSIF CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SNKPTEVATLPPVEEVPTPTPTISAPPEPSLPEPPPTAEITPEPETQIQPPEPEPTPEPE CCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATPTPTPPIQLTPEQTLIAAIENQVAEISNQIASGIIKSIQANFRTSNLTVKINDDWYTL CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECEEEEEECCCEEEE KESEQNQIASQILQRSQELDFSHLEMVDSQDKLIARNPVIGNEMIIFQRRVVGQ CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCCCEEEEHHHHHCC >Mature Secondary Structure SQDNLPEQPNQPEPTVTPANQPRQRRVPQPLWKAAIIGFLRGTIGILETTVEKLETAPP CCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGTEATPSFLQQLESRWGRFLLKSRAFIPSNLSTKLSDTALTGIIASIAVVLVWTTTSIF CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SNKPTEVATLPPVEEVPTPTPTISAPPEPSLPEPPPTAEITPEPETQIQPPEPEPTPEPE CCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATPTPTPPIQLTPEQTLIAAIENQVAEISNQIASGIIKSIQANFRTSNLTVKINDDWYTL CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECEEEEEECCCEEEE KESEQNQIASQILQRSQELDFSHLEMVDSQDKLIARNPVIGNEMIIFQRRVVGQ CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCCCEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA