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The map label for this gene is yhjL [C]

Identifier: 17229169

GI number: 17229169

Start: 2000048

End: 2000890

Strand: Direct

Name: yhjL [C]

Synonym: alr1677

Alternate gene names: 17229169

Gene position: 2000048-2000890 (Clockwise)

Preceding gene: 17229167

Following gene: 17229172

Centisome position: 31.18

GC content: 48.64

Gene sequence:

>843_bases
ATGAAACGGTGGTTATTGGAGCAAGGGCGGGTGAAGTTAAAAAGAGTATTAACTATAGGTGTGCTTACCGCACTGAGCGC
AATTACCAGCGTTTCCTGTAGTAATAATAAAGAAGTGTTGGTAACAGAAATAGGAGTAAATCCTCCTAGCCGTCGGACAA
CCAACAATTCTCAAGCTGGGCAATTTTACGTTCAAGGGCAAAGACAGCACGCTCAAGGTGATTCACAAGCGGCGATCGCC
TCCTATGATAAAGCGATTGGTTTAGATCCTGACTATAGCGCTGCCTATAGGGGACGAGGATTAGCTTACTTTGATTTGGG
AGACAAACAAAAAGCGATCGCCGACTACAACGAAGCCATTCGCCTTTCCCCCAACGATGCCGAAGCCTTTAACAGCAGGG
GAAACGCCCGCGCCTCTCTAGGTGATAACGCCGGAGCGATTACCGACTACAACGAAGCTATTCGCCTTTCCCCCAACTAC
GCCGAAGCCTACAATAACCGAGGCAATGCTCGTTCTGTCCAAGGGGACAAACAAGGAGCGCTGGAAGACTTTAACCAAGC
CATTCGCCTCAACCCCAAATATGCGATCGCCTACAACAACCGAGGTAATGCCCGTGCATCCCAGGGGGATAGGCAAGGAG
CCATATCAGACTACAATCAAGCCATTCGCCTCAATTCTAACTTTGGCCCTGCATATAATAATCGAGGCAATGCCCGTGCA
GCCCAAGGTGACAGACAAGGAGCGCTGGAAGATTTGCAAAAAGCAGCAGATATCTTCCAGCGACAAAACAATAACGACTT
GTACCAGCAAGCGATGAATAATATCAAAGAGTTGGGGCAGTAG

Upstream 100 bases:

>100_bases
CTCAGGATATCTGGATACAGTAAGAACCAATATTTAGTTGGATAATTGACTGAGTTTGGTACTAATTTTATCCAGTTATC
ATAGCGGTTTAGAGCAAGTT

Downstream 100 bases:

>100_bases
TAATATCAATTCAAAATAGCCTACGGCAAGGCTACGCCAACAAAATTAAGAATTACTCCTAATGCCCAATTGGTTGCACG
TCTTCTTCAATAGACGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKRWLLEQGRVKLKRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYVQGQRQHAQGDSQAAIA
SYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNY
AEAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQAIRLNSNFGPAYNNRGNARA
AQGDRQGALEDLQKAADIFQRQNNNDLYQQAMNNIKELGQ

Sequences:

>Translated_280_residues
MKRWLLEQGRVKLKRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYVQGQRQHAQGDSQAAIA
SYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNY
AEAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQAIRLNSNFGPAYNNRGNARA
AQGDRQGALEDLQKAADIFQRQNNNDLYQQAMNNIKELGQ
>Mature_280_residues
MKRWLLEQGRVKLKRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYVQGQRQHAQGDSQAAIA
SYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNY
AEAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQAIRLNSNFGPAYNNRGNARA
AQGDRQGALEDLQKAADIFQRQNNNDLYQQAMNNIKELGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=181, Percent_Identity=33.1491712707182, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI32307150, Length=181, Percent_Identity=33.1491712707182, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI170784867, Length=183, Percent_Identity=30.6010928961749, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI310131789, Length=222, Percent_Identity=28.3783783783784, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI310110582, Length=222, Percent_Identity=28.3783783783784, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI310123097, Length=222, Percent_Identity=28.3783783783784, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI5803181, Length=237, Percent_Identity=24.8945147679325, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=187, Percent_Identity=31.0160427807487, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI115532692, Length=187, Percent_Identity=31.0160427807487, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17647755, Length=181, Percent_Identity=32.0441988950276, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24585827, Length=181, Percent_Identity=32.0441988950276, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24585829, Length=181, Percent_Identity=32.0441988950276, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24647123, Length=147, Percent_Identity=29.2517006802721, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 30657; Mature: 30657

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWLLEQGRVKLKRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
QFYVQGQRQHAQGDSQAAIASYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAI
EEEEECCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHCCEE
RLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKQGA
EECCCHHHHHCCCCCCEECCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC
LEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQAIRLNSNFGPAYNNRGNARA
HHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCC
AQGDRQGALEDLQKAADIFQRQNNNDLYQQAMNNIKELGQ
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRWLLEQGRVKLKRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
QFYVQGQRQHAQGDSQAAIASYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAI
EEEEECCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHCCEE
RLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKQGA
EECCCHHHHHCCCCCCEECCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC
LEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQAIRLNSNFGPAYNNRGNARA
HHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCC
AQGDRQGALEDLQKAADIFQRQNNNDLYQQAMNNIKELGQ
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]