Click here to switch to the map view.

The map label for this gene is 17229070

Identifier: 17229070

GI number: 17229070

Start: 1847129

End: 1847605

Strand: Direct

Name: 17229070

Synonym: alr1578

Alternate gene names: NA

Gene position: 1847129-1847605 (Clockwise)

Preceding gene: 17229069

Following gene: 17229071

Centisome position: 28.8

GC content: 41.51

Gene sequence:

>477_bases
ATGGATATTAATACACCTGAATTTAGGGAGTATTTCCTTAATCTCTCAGTGGTTCTTACCGGTTTTTCCAAGTTTCAATT
GCAGGGAACAGGCCTTGCTACTCTTTATTTTGAAAACATTCGGGACATCATTGGTGAAGATATATTTGGAGAACTCTTAA
CAAATTTTCATAAGTTGGAGGTTGAAAAAACAGAAAAAAACCACGAATCTATCAAACAAATATTGGCATCTGAAAAATTT
GGCCCGATCGCCCGCAATATCATTAAGATTTGGTACATAGCTACTTGGTATGCACTGCCACAATCTTGGCGGGAAGTTTT
TGGCACCAAAGAAAAGGATGGAACCTTTATTATCAGTCCGCAGGCCTATCCAGAAGGACTTTTATGGCCGGCGATCGGTG
TTAACCCACCTGGGGCGAAAGGCCAGGGATACGGGACTTGGAGCGAACCCCCGTTAGTTAGCTTGAATAAAAGCTAA

Upstream 100 bases:

>100_bases
CCAGGAAATCCAGAGGTGAATGCGGCTCCTATTTTTCGGTTAGATAAGTTTTAGCTAACTTTGAGTTGAGATTTAAACTT
TTTGTGGAGGTAAATAATTG

Downstream 100 bases:

>100_bases
CATCTCTTCTGTGTAGGGGTTAACCTCAACCTCACCCAAGGGTAAAAAAAGACCCGTCTTTGATTTTGAAAAAATTGCAC
AATTTTCTAGTTTAAAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDINTPEFREYFLNLSVVLTGFSKFQLQGTGLATLYFENIRDIIGEDIFGELLTNFHKLEVEKTEKNHESIKQILASEKF
GPIARNIIKIWYIATWYALPQSWREVFGTKEKDGTFIISPQAYPEGLLWPAIGVNPPGAKGQGYGTWSEPPLVSLNKS

Sequences:

>Translated_158_residues
MDINTPEFREYFLNLSVVLTGFSKFQLQGTGLATLYFENIRDIIGEDIFGELLTNFHKLEVEKTEKNHESIKQILASEKF
GPIARNIIKIWYIATWYALPQSWREVFGTKEKDGTFIISPQAYPEGLLWPAIGVNPPGAKGQGYGTWSEPPLVSLNKS
>Mature_158_residues
MDINTPEFREYFLNLSVVLTGFSKFQLQGTGLATLYFENIRDIIGEDIFGELLTNFHKLEVEKTEKNHESIKQILASEKF
GPIARNIIKIWYIATWYALPQSWREVFGTKEKDGTFIISPQAYPEGLLWPAIGVNPPGAKGQGYGTWSEPPLVSLNKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17913; Mature: 17913

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINTPEFREYFLNLSVVLTGFSKFQLQGTGLATLYFENIRDIIGEDIFGELLTNFHKLE
CCCCCHHHHHHHHHHHHHEECCHHEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
VEKTEKNHESIKQILASEKFGPIARNIIKIWYIATWYALPQSWREVFGTKEKDGTFIISP
HHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
QAYPEGLLWPAIGVNPPGAKGQGYGTWSEPPLVSLNKS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MDINTPEFREYFLNLSVVLTGFSKFQLQGTGLATLYFENIRDIIGEDIFGELLTNFHKLE
CCCCCHHHHHHHHHHHHHEECCHHEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
VEKTEKNHESIKQILASEKFGPIARNIIKIWYIATWYALPQSWREVFGTKEKDGTFIISP
HHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
QAYPEGLLWPAIGVNPPGAKGQGYGTWSEPPLVSLNKS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA