| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229069
Identifier: 17229069
GI number: 17229069
Start: 1845982
End: 1847082
Strand: Direct
Name: 17229069
Synonym: alr1577
Alternate gene names: NA
Gene position: 1845982-1847082 (Clockwise)
Preceding gene: 17229068
Following gene: 17229070
Centisome position: 28.78
GC content: 41.96
Gene sequence:
>1101_bases ATGACTATAGCCGCCGATAGCTTAAAGTTGATTACAACAGTTGAACAATTGAAGTACTATCTCATCCAGGCAATGAAGAT AGAACACGCAACCATTCCCCCTTACATGACAGCCCTTTACTCTATTAAACCCGGAACAAATTTAGAAGCTTTTCATATTA TCCGGGAGGTTGCTGTAGAAGAAATGTTACACCTAACTCTTGTAGCTAATGTTTATAATGCCGTGGGAGGCTCGTTTGCA TCACCAGTCCTGACAGCACCTAACTTTATTCCCAAATATCCGAGCTATCTACCTACAGGATCTACAGACTTTAAAGTAGG TTTAACCAAGTTTTCCAAAAAGACTATAGAGACCTTTCGTAAGATTGAACGGTCTCAGGATGTTGAAGAAGGTGATCCAT TAGTTGAGTCTCGAACCTTACAAGAATATTTACTAGAAGTTGTAGGCTGCGATCCGACCAAGACTTTCTACAGCATTGGC TTATTTTATGCAGAGATCATTCGTGGTCTCAACGCACTCTATAAAGAAAAGGGTCCTGATCTATTTTGTGGCGATCCTCA GCGACAAATCACCCCCGAATACTACTATAACGGTGGTGGAGACATCATCCCTGTGACCGACCTGCGTTCAGCCATACGAG CTTTGAAAGTGATTCAAGATCAAGGTGAAGGGTCAAGAAGTGGAACAATCTATGATGCAGAACGAGAACTAGCCCATGAC TATCGTTTTCAGCAAATCTTATTAGAGCAATATTATGTGATCGACAAGGATGATCCGACAAAATCCGATCAGCCCAATGA GCCTACAGGCAAATCCTTTACCGTAGATTGGAAGGCAGTTTATCCCATTAAAGATAATGCCAAACTGAGCGATTATCCAG AAGGTTCGGAAGTACGTACAGCAGCCTTAGAGTTTCACTCTGCCTATAGAGAATTCTTAACCAAAATTGAATACGCTTTT GATGGGCATCCTGAGCAGTTAATTCCCGCAGTTGGGGGAATGTTCCGCCTCAAAGAACAGGCTAATAGTTTAATGCGTAA TCCTATTCCAGGAAATCCAGAGGTGAATGCGGCTCCTATTTTTCGGTTAGATAAGTTTTAG
Upstream 100 bases:
>100_bases CCATAAGGGCTGAAACTCAGAGATAAATAGGATTCTACTCCTATTTAATGACACTCCCTATTACCCTTTACGAAGTCGAA AAAACATCGCAAATAAAACT
Downstream 100 bases:
>100_bases CTAACTTTGAGTTGAGATTTAAACTTTTTGTGGAGGTAAATAATTGATGGATATTAATACACCTGAATTTAGGGAGTATT TCCTTAATCTCTCAGTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTIAADSLKLITTVEQLKYYLIQAMKIEHATIPPYMTALYSIKPGTNLEAFHIIREVAVEEMLHLTLVANVYNAVGGSFA SPVLTAPNFIPKYPSYLPTGSTDFKVGLTKFSKKTIETFRKIERSQDVEEGDPLVESRTLQEYLLEVVGCDPTKTFYSIG LFYAEIIRGLNALYKEKGPDLFCGDPQRQITPEYYYNGGGDIIPVTDLRSAIRALKVIQDQGEGSRSGTIYDAERELAHD YRFQQILLEQYYVIDKDDPTKSDQPNEPTGKSFTVDWKAVYPIKDNAKLSDYPEGSEVRTAALEFHSAYREFLTKIEYAF DGHPEQLIPAVGGMFRLKEQANSLMRNPIPGNPEVNAAPIFRLDKF
Sequences:
>Translated_366_residues MTIAADSLKLITTVEQLKYYLIQAMKIEHATIPPYMTALYSIKPGTNLEAFHIIREVAVEEMLHLTLVANVYNAVGGSFA SPVLTAPNFIPKYPSYLPTGSTDFKVGLTKFSKKTIETFRKIERSQDVEEGDPLVESRTLQEYLLEVVGCDPTKTFYSIG LFYAEIIRGLNALYKEKGPDLFCGDPQRQITPEYYYNGGGDIIPVTDLRSAIRALKVIQDQGEGSRSGTIYDAERELAHD YRFQQILLEQYYVIDKDDPTKSDQPNEPTGKSFTVDWKAVYPIKDNAKLSDYPEGSEVRTAALEFHSAYREFLTKIEYAF DGHPEQLIPAVGGMFRLKEQANSLMRNPIPGNPEVNAAPIFRLDKF >Mature_365_residues TIAADSLKLITTVEQLKYYLIQAMKIEHATIPPYMTALYSIKPGTNLEAFHIIREVAVEEMLHLTLVANVYNAVGGSFAS PVLTAPNFIPKYPSYLPTGSTDFKVGLTKFSKKTIETFRKIERSQDVEEGDPLVESRTLQEYLLEVVGCDPTKTFYSIGL FYAEIIRGLNALYKEKGPDLFCGDPQRQITPEYYYNGGGDIIPVTDLRSAIRALKVIQDQGEGSRSGTIYDAERELAHDY RFQQILLEQYYVIDKDDPTKSDQPNEPTGKSFTVDWKAVYPIKDNAKLSDYPEGSEVRTAALEFHSAYREFLTKIEYAFD GHPEQLIPAVGGMFRLKEQANSLMRNPIPGNPEVNAAPIFRLDKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41283; Mature: 41152
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAADSLKLITTVEQLKYYLIQAMKIEHATIPPYMTALYSIKPGTNLEAFHIIREVAVE CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHH EMLHLTLVANVYNAVGGSFASPVLTAPNFIPKYPSYLPTGSTDFKVGLTKFSKKTIETFR HHHHHHHHHHHHHHHCCHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KIERSQDVEEGDPLVESRTLQEYLLEVVGCDPTKTFYSIGLFYAEIIRGLNALYKEKGPD HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC LFCGDPQRQITPEYYYNGGGDIIPVTDLRSAIRALKVIQDQGEGSRSGTIYDAERELAHD CCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHH YRFQQILLEQYYVIDKDDPTKSDQPNEPTGKSFTVDWKAVYPIKDNAKLSDYPEGSEVRT HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHH AALEFHSAYREFLTKIEYAFDGHPEQLIPAVGGMFRLKEQANSLMRNPIPGNPEVNAAPI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FRLDKF EEECCC >Mature Secondary Structure TIAADSLKLITTVEQLKYYLIQAMKIEHATIPPYMTALYSIKPGTNLEAFHIIREVAVE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHH EMLHLTLVANVYNAVGGSFASPVLTAPNFIPKYPSYLPTGSTDFKVGLTKFSKKTIETFR HHHHHHHHHHHHHHHCCHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KIERSQDVEEGDPLVESRTLQEYLLEVVGCDPTKTFYSIGLFYAEIIRGLNALYKEKGPD HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC LFCGDPQRQITPEYYYNGGGDIIPVTDLRSAIRALKVIQDQGEGSRSGTIYDAERELAHD CCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHH YRFQQILLEQYYVIDKDDPTKSDQPNEPTGKSFTVDWKAVYPIKDNAKLSDYPEGSEVRT HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHH AALEFHSAYREFLTKIEYAFDGHPEQLIPAVGGMFRLKEQANSLMRNPIPGNPEVNAAPI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FRLDKF EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA