| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228298
Identifier: 17228298
GI number: 17228298
Start: 928924
End: 930207
Strand: Direct
Name: 17228298
Synonym: alr0803
Alternate gene names: NA
Gene position: 928924-930207 (Clockwise)
Preceding gene: 17228294
Following gene: 17228299
Centisome position: 14.48
GC content: 50.23
Gene sequence:
>1284_bases ATGGTAGTAGGTGTACATAGACGCGCTGTAGGCGTATTCTCTCATCGTCGAGATGCTGAACAAGCCCTCCACGAATTGAA ACAATCTGGTTTTGCGATGGATAGAATTTCCATCATTGCTCAGGATGCAGACCGGAATGAAGAAATTGCTGGTAGCCCTG TGCGAGAGAAAGTAGGTGATAAGTCTGACGAGGGTGCTAAAACAGGGGCTATTACTGGCGGTGCTTTAGGCGGATTGGGT GGTTTATTAGTTGGTCTTGGCACTCTAGCAATTCCAGGAATTGGGCCGATCATGTTAGCAGGTGCAACGGCAACAACCTT GGCTACAACCCTTGCTGGTGCTGGAATTGGTGCCGTGGCTGGTGGTCTATTGGGTGGATTGATTGGTTTAGGAATTCCAG AAGAACGAGCTAGAGGTTATGAAGACCGTGTACGCCGTGGTCACTATTTAGTCATAGTAGACGGAACTGATGCAGAAATC GCCCAAGCAGAAGCAATCCTGCGCCGTCGTGGCATAGAAGACTACGATATTTATGATGCTCCTGGAACCGCAGCAGCAGC CACTGGTGTTACTCATCGAGATGTGGCTCCCACAACAACCAGACAAAGAAGCAGAAGAGCAATTGGCGTATTTCCTCACC GTCGAGATGCCGAAGCAGCATTAACAGAATTGCGGGATGCAGGCTTCTCCATGAATCAAGTTTCCCTCATCGCTAAAGAT AACAGTGGTAACAAAACCACAGGTGCAGGTGCGAACCTTGATCAAGGCAATAAAGCCGACGAAGGAGCCAAGGCTGGAGC CGCTACAGGCGGAGGTTTAGGCGCTTTAGGCGGCCTATTAGTAGGATTGGGTGCTTTGGCAATTCCCGGCGTTGGGCCAG TAATTGCGGGTGGTGCAGCCGCTACCGCGATCGCCACAACTTTAGCAGGTGGCGCTCTCGGTGCAGCCGCAGGTGGAATT GTTGGCGGACTCGTGGGCTTGGGAATCCCGGAAGACAAAGCGCGAGTTTATAGCGATCGCTTCCAAAGAGGTGACTACCT CATCATTGTTGATGGTACAGAAAGCGAAATTCAACACGCTGAGGCTATCCTCAAACGTCGCGGTATTCAAGAATACTCTG TTTTTGATGCCACTGATTTACATGATACACACCGCCGAGATGTTGATAGCACAATCACAGGCGATCGCGTTTCCTCTACT GTAGGCGATCGTGTTTCCTCTAACGTAGGTCACGACACAGAACCAAGCGTAGTGATTGTTGATCACCGCGAAGAAAGAAT CTAA
Upstream 100 bases:
>100_bases GAAGTTAGAACCAAGAGATAAATAGGAAGTAATGAAATCAATTATTTTCTAAAAAATTAATTACCTAATTTTGTCTTTTG TTGTTTGGAGAATTTAAACA
Downstream 100 bases:
>100_bases TCCCATTGATTAACTGAGGGACGTGATGTAACGCGTCTCTCAAGAAACTAAACAAAATCTATCCTCACTAAATTATTGAT ACCTGGAAATAAAGAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MVVGVHRRAVGVFSHRRDAEQALHELKQSGFAMDRISIIAQDADRNEEIAGSPVREKVGDKSDEGAKTGAITGGALGGLG GLLVGLGTLAIPGIGPIMLAGATATTLATTLAGAGIGAVAGGLLGGLIGLGIPEERARGYEDRVRRGHYLVIVDGTDAEI AQAEAILRRRGIEDYDIYDAPGTAAAATGVTHRDVAPTTTRQRSRRAIGVFPHRRDAEAALTELRDAGFSMNQVSLIAKD NSGNKTTGAGANLDQGNKADEGAKAGAATGGGLGALGGLLVGLGALAIPGVGPVIAGGAAATAIATTLAGGALGAAAGGI VGGLVGLGIPEDKARVYSDRFQRGDYLIIVDGTESEIQHAEAILKRRGIQEYSVFDATDLHDTHRRDVDSTITGDRVSST VGDRVSSNVGHDTEPSVVIVDHREERI
Sequences:
>Translated_427_residues MVVGVHRRAVGVFSHRRDAEQALHELKQSGFAMDRISIIAQDADRNEEIAGSPVREKVGDKSDEGAKTGAITGGALGGLG GLLVGLGTLAIPGIGPIMLAGATATTLATTLAGAGIGAVAGGLLGGLIGLGIPEERARGYEDRVRRGHYLVIVDGTDAEI AQAEAILRRRGIEDYDIYDAPGTAAAATGVTHRDVAPTTTRQRSRRAIGVFPHRRDAEAALTELRDAGFSMNQVSLIAKD NSGNKTTGAGANLDQGNKADEGAKAGAATGGGLGALGGLLVGLGALAIPGVGPVIAGGAAATAIATTLAGGALGAAAGGI VGGLVGLGIPEDKARVYSDRFQRGDYLIIVDGTESEIQHAEAILKRRGIQEYSVFDATDLHDTHRRDVDSTITGDRVSST VGDRVSSNVGHDTEPSVVIVDHREERI >Mature_427_residues MVVGVHRRAVGVFSHRRDAEQALHELKQSGFAMDRISIIAQDADRNEEIAGSPVREKVGDKSDEGAKTGAITGGALGGLG GLLVGLGTLAIPGIGPIMLAGATATTLATTLAGAGIGAVAGGLLGGLIGLGIPEERARGYEDRVRRGHYLVIVDGTDAEI AQAEAILRRRGIEDYDIYDAPGTAAAATGVTHRDVAPTTTRQRSRRAIGVFPHRRDAEAALTELRDAGFSMNQVSLIAKD NSGNKTTGAGANLDQGNKADEGAKAGAATGGGLGALGGLLVGLGALAIPGVGPVIAGGAAATAIATTLAGGALGAAAGGI VGGLVGLGIPEDKARVYSDRFQRGDYLIIVDGTESEIQHAEAILKRRGIQEYSVFDATDLHDTHRRDVDSTITGDRVSST VGDRVSSNVGHDTEPSVVIVDHREERI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009317 [H]
Pfam domain/function: PF06150 ChaB [H]
EC number: NA
Molecular weight: Translated: 43597; Mature: 43597
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVGVHRRAVGVFSHRRDAEQALHELKQSGFAMDRISIIAQDADRNEEIAGSPVREKVGD CEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCCHHHHCCC KSDEGAKTGAITGGALGGLGGLLVGLGTLAIPGIGPIMLAGATATTLATTLAGAGIGAVA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCHHHHH GGLLGGLIGLGIPEERARGYEDRVRRGHYLVIVDGTDAEIAQAEAILRRRGIEDYDIYDA HHHHHHHHHCCCCHHHHCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC PGTAAAATGVTHRDVAPTTTRQRSRRAIGVFPHRRDAEAALTELRDAGFSMNQVSLIAKD CCCHHHHCCCCCCCCCCCHHHHHHCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEEC NSGNKTTGAGANLDQGNKADEGAKAGAATGGGLGALGGLLVGLGALAIPGVGPVIAGGAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCHH ATAIATTLAGGALGAAAGGIVGGLVGLGIPEDKARVYSDRFQRGDYLIIVDGTESEIQHA HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH EAILKRRGIQEYSVFDATDLHDTHRRDVDSTITGDRVSSTVGDRVSSNVGHDTEPSVVIV HHHHHHCCCCHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE DHREERI CCCCCCC >Mature Secondary Structure MVVGVHRRAVGVFSHRRDAEQALHELKQSGFAMDRISIIAQDADRNEEIAGSPVREKVGD CEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCCHHHHCCC KSDEGAKTGAITGGALGGLGGLLVGLGTLAIPGIGPIMLAGATATTLATTLAGAGIGAVA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCHHHHH GGLLGGLIGLGIPEERARGYEDRVRRGHYLVIVDGTDAEIAQAEAILRRRGIEDYDIYDA HHHHHHHHHCCCCHHHHCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC PGTAAAATGVTHRDVAPTTTRQRSRRAIGVFPHRRDAEAALTELRDAGFSMNQVSLIAKD CCCHHHHCCCCCCCCCCCHHHHHHCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEEC NSGNKTTGAGANLDQGNKADEGAKAGAATGGGLGALGGLLVGLGALAIPGVGPVIAGGAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCHH ATAIATTLAGGALGAAAGGIVGGLVGLGIPEDKARVYSDRFQRGDYLIIVDGTESEIQHA HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH EAILKRRGIQEYSVFDATDLHDTHRRDVDSTITGDRVSSTVGDRVSSNVGHDTEPSVVIV HHHHHHCCCCHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE DHREERI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA