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The map label for this gene is ydhD [C]

Identifier: 17228294

GI number: 17228294

Start: 923618

End: 923941

Strand: Direct

Name: ydhD [C]

Synonym: alr0799

Alternate gene names: 17228294

Gene position: 923618-923941 (Clockwise)

Preceding gene: 17228293

Following gene: 17228298

Centisome position: 14.4

GC content: 36.11

Gene sequence:

>324_bases
ATGACACAGGAAACCAGCGAAAAAATTAATAATTTAATAACACAAAATAAAATTATGGTTTTCATGAAGGGAACCAAATT
GATGCCTCAGTGTGGCTTCTCTAACAATGTTGTGCAGATTCTCAATACTTTGGGTGTTCCTTTTGAGACTATCAACGTTT
TAGAAGACCAAGAAATTCGCCAGGGTATTAAAGAATATTCCAACTGGCCGACAATTCCCCAAGTTTATATCAATGGGGAG
TTTATTGGTGGTTCCGATATTCTGATTGAACTTTACCAAAAAGGTGAGTTACAGCAATTAGTGGAAGTTGCTTTAGCTTC
TTAG

Upstream 100 bases:

>100_bases
TCAATAGTTCATAGTCAACATTAAGAAATCAATGACTAATGGCTAATAACTAATGACTAATGACTAATAACTAATCACAA
AACTAGGACATACAAAAGCC

Downstream 100 bases:

>100_bases
TATTGTGGGAAAAAGGGATTCAAAACCCTAATCATGCTCAAATGTAGTGGGAGTTCAATAAATTTGAAATAACCCCTCTC
CATACCTCTCCCCGACGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTQETSEKINNLITQNKIMVFMKGTKLMPQCGFSNNVVQILNTLGVPFETINVLEDQEIRQGIKEYSNWPTIPQVYINGE
FIGGSDILIELYQKGELQQLVEVALAS

Sequences:

>Translated_107_residues
MTQETSEKINNLITQNKIMVFMKGTKLMPQCGFSNNVVQILNTLGVPFETINVLEDQEIRQGIKEYSNWPTIPQVYINGE
FIGGSDILIELYQKGELQQLVEVALAS
>Mature_106_residues
TQETSEKINNLITQNKIMVFMKGTKLMPQCGFSNNVVQILNTLGVPFETINVLEDQEIRQGIKEYSNWPTIPQVYINGEF
IGGSDILIELYQKGELQQLVEVALAS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=59.7826086956522, Blast_Score=126, Evalue=3e-30,
Organism=Homo sapiens, GI95113651, Length=91, Percent_Identity=51.6483516483517, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1787943, Length=102, Percent_Identity=46.078431372549, Blast_Score=113, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=47.4747474747475, Blast_Score=114, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71988153, Length=84, Percent_Identity=44.047619047619, Blast_Score=99, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71988159, Length=107, Percent_Identity=42.0560747663551, Blast_Score=99, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6325198, Length=109, Percent_Identity=45.8715596330275, Blast_Score=107, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6320303, Length=83, Percent_Identity=45.7831325301205, Blast_Score=89, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=44.578313253012, Blast_Score=89, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24642023, Length=89, Percent_Identity=52.8089887640449, Blast_Score=119, Evalue=3e-28,
Organism=Drosophila melanogaster, GI19921242, Length=96, Percent_Identity=47.9166666666667, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12078; Mature: 11947

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQETSEKINNLITQNKIMVFMKGTKLMPQCGFSNNVVQILNTLGVPFETINVLEDQEIR
CCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
QGIKEYSNWPTIPQVYINGEFIGGSDILIELYQKGELQQLVEVALAS
HHHHHHCCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
TQETSEKINNLITQNKIMVFMKGTKLMPQCGFSNNVVQILNTLGVPFETINVLEDQEIR
CCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
QGIKEYSNWPTIPQVYINGEFIGGSDILIELYQKGELQQLVEVALAS
HHHHHHCCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]