| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228299
Identifier: 17228299
GI number: 17228299
Start: 930304
End: 930765
Strand: Direct
Name: 17228299
Synonym: alr0804
Alternate gene names: NA
Gene position: 930304-930765 (Clockwise)
Preceding gene: 17228298
Following gene: 17228300
Centisome position: 14.5
GC content: 45.02
Gene sequence:
>462_bases ATGAAAAAGCTAACTCCTCTTCTAATTAGTTCTTTACTAGTGTTTGGTGCTGCGGCTTGTCAAGATGGTGCAAGAACCAG TCAATCTGCACCCGATACTACAGCAGAAAATGTACAAGCACCTTCTGCGGAAGCAACCCAAGCTGCTCAACAAGACGCTC AGAGCGAGGTTCGTAGAGATCAACTCAATGCCGATATCCGCGCCCGCGAACAACGCAACAATATTACTGGCGGCGATGCA CAAAGAGCTGAAGGTGATTTAGCTAGCGAAGTTCGTTCCAAATTAGAGGCGAATATACCTAATGGTGCATTAACAGTCCA AGCAGAAGATAATGGTACTGTCACTGTTGGCGGAACTGTCAACAACCAAGACCAGTTGTCTAAAATTGAACCTTTAGCCA AAGAAATTAAAGGTGTCACCAACGTAGTTGTCAAAGCAGTTGTTGCTCCCCCAAACAGTTAA
Upstream 100 bases:
>100_bases CTAATCCCATTGATTAACTGAGGGACGTGATGTAACGCGTCTCTCAAGAAACTAAACAAAATCTATCCTCACTAAATTAT TGATACCTGGAAATAAAGAA
Downstream 100 bases:
>100_bases GGGACTTCCAGCTAAAAAATATCTAATTACTTTGGTAGCAGGGGAAGCCGGAGGTGCAGAGGGAGAAAGAGTCTTCTCAT CGTCTTTGCCATTAACAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKKLTPLLISSLLVFGAAACQDGARTSQSAPDTTAENVQAPSAEATQAAQQDAQSEVRRDQLNADIRAREQRNNITGGDA QRAEGDLASEVRSKLEANIPNGALTVQAEDNGTVTVGGTVNNQDQLSKIEPLAKEIKGVTNVVVKAVVAPPNS
Sequences:
>Translated_153_residues MKKLTPLLISSLLVFGAAACQDGARTSQSAPDTTAENVQAPSAEATQAAQQDAQSEVRRDQLNADIRAREQRNNITGGDA QRAEGDLASEVRSKLEANIPNGALTVQAEDNGTVTVGGTVNNQDQLSKIEPLAKEIKGVTNVVVKAVVAPPNS >Mature_153_residues MKKLTPLLISSLLVFGAAACQDGARTSQSAPDTTAENVQAPSAEATQAAQQDAQSEVRRDQLNADIRAREQRNNITGGDA QRAEGDLASEVRSKLEANIPNGALTVQAEDNGTVTVGGTVNNQDQLSKIEPLAKEIKGVTNVVVKAVVAPPNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15974; Mature: 15974
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTPLLISSLLVFGAAACQDGARTSQSAPDTTAENVQAPSAEATQAAQQDAQSEVRRD CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH QLNADIRAREQRNNITGGDAQRAEGDLASEVRSKLEANIPNGALTVQAEDNGTVTVGGTV HHCCCHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCC NNQDQLSKIEPLAKEIKGVTNVVVKAVVAPPNS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKLTPLLISSLLVFGAAACQDGARTSQSAPDTTAENVQAPSAEATQAAQQDAQSEVRRD CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH QLNADIRAREQRNNITGGDAQRAEGDLASEVRSKLEANIPNGALTVQAEDNGTVTVGGTV HHCCCHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCC NNQDQLSKIEPLAKEIKGVTNVVVKAVVAPPNS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA