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The map label for this gene is 17228112

Identifier: 17228112

GI number: 17228112

Start: 716601

End: 717281

Strand: Direct

Name: 17228112

Synonym: alr0616

Alternate gene names: NA

Gene position: 716601-717281 (Clockwise)

Preceding gene: 17228110

Following gene: 17228113

Centisome position: 11.17

GC content: 44.49

Gene sequence:

>681_bases
ATGACTGTTTCACAATTGCAGGAAATTTCTGCTCAGTTAGAAAGTCCAGATTTGCGCGATCGCATGGTAGCTCTTGCTAA
TTTGCGAAATATAGCTGCTGAGGATGCTGTACCTTTAATTAAAAAGGTATTGGACGACGAATCTTTACAGCTGCGATCGA
TGGCAATCTTTGCTCTAGGCATCAAACAAACAGCAGAATGTTACCCAATCTTGGCAACCATTCTCCAAAATGACCCAGAT
TATGGCATTCGCGCTGATGCGGCTGGCGCATTGGGATACTTGGGTGATATTAGAGCCTTTGAAGTGCTGTCACGAGCATT
TTACGAAGACACAGACTGGTTAGTCCGTTTTAGTGCGGCAGTTTCTCTTGGTAATCTCAAAGACCCACGCGCCCATGAAG
TCTTGATGCAGGCGTTAGATAGCAAAGAAGGAGTCATCCAGCAAGCTGCTATCTCTGCCTTAGGTGAAATACAAGATATT
GAGTCGGTTGATAGTATCCTGCGCTTTGCTCAGTCAGATGATTGGTTGGTGCGCCAACGTCTGGCAGAATCCTTGGGTAA
TCTTCCCACTCCCAAGAGTGTATCAGCTTTAAAATACTTAGAAAAAGACAGTCATCCTAATGTTGCCGAAGCTGCGAGGA
TTGGTCTAAAAAGACTTGAGGAAATGGGTAATCAAGCTTAA

Upstream 100 bases:

>100_bases
AGAAGGCGGAAAACACTCTACTCTCATTCCTGAACTCCCGACCAAGCCACATGAGACATCAGGTAAAGTAAAGATACATT
AAGAATGCGCTGAGAATTAA

Downstream 100 bases:

>100_bases
TATCACGTCCCATACTAGCTTTTAATAATAATAAGTGGGATTTTTAAATTAAGACTCAGGGAATTTAATTCATGAATATT
GAAGAATTTTTTGAATTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; PBS Lyase HEAT-Like Repeat Domain Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein; Heat Domain-Containing Protein; HEAT Repeat-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase-Like Protein; HEAT Domain-Containing Protein; HEAT Domain Containing Protein

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTVSQLQEISAQLESPDLRDRMVALANLRNIAAEDAVPLIKKVLDDESLQLRSMAIFALGIKQTAECYPILATILQNDPD
YGIRADAAGALGYLGDIRAFEVLSRAFYEDTDWLVRFSAAVSLGNLKDPRAHEVLMQALDSKEGVIQQAAISALGEIQDI
ESVDSILRFAQSDDWLVRQRLAESLGNLPTPKSVSALKYLEKDSHPNVAEAARIGLKRLEEMGNQA

Sequences:

>Translated_226_residues
MTVSQLQEISAQLESPDLRDRMVALANLRNIAAEDAVPLIKKVLDDESLQLRSMAIFALGIKQTAECYPILATILQNDPD
YGIRADAAGALGYLGDIRAFEVLSRAFYEDTDWLVRFSAAVSLGNLKDPRAHEVLMQALDSKEGVIQQAAISALGEIQDI
ESVDSILRFAQSDDWLVRQRLAESLGNLPTPKSVSALKYLEKDSHPNVAEAARIGLKRLEEMGNQA
>Mature_225_residues
TVSQLQEISAQLESPDLRDRMVALANLRNIAAEDAVPLIKKVLDDESLQLRSMAIFALGIKQTAECYPILATILQNDPDY
GIRADAAGALGYLGDIRAFEVLSRAFYEDTDWLVRFSAAVSLGNLKDPRAHEVLMQALDSKEGVIQQAAISALGEIQDIE
SVDSILRFAQSDDWLVRQRLAESLGNLPTPKSVSALKYLEKDSHPNVAEAARIGLKRLEEMGNQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24822; Mature: 24690

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSQLQEISAQLESPDLRDRMVALANLRNIAAEDAVPLIKKVLDDESLQLRSMAIFALG
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IKQTAECYPILATILQNDPDYGIRADAAGALGYLGDIRAFEVLSRAFYEDTDWLVRFSAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VSLGNLKDPRAHEVLMQALDSKEGVIQQAAISALGEIQDIESVDSILRFAQSDDWLVRQR
HHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAESLGNLPTPKSVSALKYLEKDSHPNVAEAARIGLKRLEEMGNQA
HHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TVSQLQEISAQLESPDLRDRMVALANLRNIAAEDAVPLIKKVLDDESLQLRSMAIFALG
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IKQTAECYPILATILQNDPDYGIRADAAGALGYLGDIRAFEVLSRAFYEDTDWLVRFSAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VSLGNLKDPRAHEVLMQALDSKEGVIQQAAISALGEIQDIESVDSILRFAQSDDWLVRQR
HHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAESLGNLPTPKSVSALKYLEKDSHPNVAEAARIGLKRLEEMGNQA
HHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA