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The map label for this gene is cpcS1

Identifier: 17228113

GI number: 17228113

Start: 717353

End: 717919

Strand: Direct

Name: cpcS1

Synonym: alr0617

Alternate gene names: 17228113

Gene position: 717353-717919 (Clockwise)

Preceding gene: 17228112

Following gene: 17228114

Centisome position: 11.18

GC content: 46.21

Gene sequence:

>567_bases
ATGAATATTGAAGAATTTTTTGAATTGAGTGCAGGTAAATGGTTTTCTCATCGTACCAGTCATCATTTAGCTTTTAAGCA
ATCGGAAGATGGCAAGTCTGATCTGGTAATTGAGTCACTAGCCGCAGATCATCCAGAAGTCATCAAGTTGTGCGAATTGT
ACGAAGTTCCTGCTAGTGCTGCTTCATGCGGTGCGAGGGTTAGCTGGAACGGTACTATGGAATGGGATGAAGAAAAACAT
ACTGGATCTACAGTGTTAGCTACTGTACCAGATGTGGATAATCCCAACGAAGGTAGATTACTGCGGGAAATGGGTTATGC
CGAGAAAGCCCCTGTAGCTGGACGTTACAAGATGGGCGACGATGGCGCTTTGACTCTGACGACAGAGTACGAAACCATGT
GGTCAGAAGAACGCTTATGGTTTGCTAGCCCTAATTTACGGATGCGCGTCAGTGTCTTAAAGCGTTTTGGGGGCTTTAGT
ATGGCTTCCTTTACTTCTGAGATTCGGATGGGCGGAAGTCCGGCTGCGGCGAAAGCTGAGGAAGCGGCTAATTCTGCATC
AAGTTAA

Upstream 100 bases:

>100_bases
GACTTGAGGAAATGGGTAATCAAGCTTAATATCACGTCCCATACTAGCTTTTAATAATAATAAGTGGGATTTTTAAATTA
AGACTCAGGGAATTTAATTC

Downstream 100 bases:

>100_bases
AAGGAGGCAGGAGATGGGGAGTGGTAAGGCTTGTGAAACTTCCTTCATCATGGCTCCTCCTGCCTCCTGCCCCCTTAAAT
CAGGCTAATTATGCAGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Phycocyanobilin:Cys-beta84-phycobiliprotein lyase CpcS; Phycocyanobilin:Cys-beta84-phycobiliprotein lyase CpcS-III; Phycocyanobilin:Cys-beta84-phycobiliprotein lyase CpeS

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNIEEFFELSAGKWFSHRTSHHLAFKQSEDGKSDLVIESLAADHPEVIKLCELYEVPASAASCGARVSWNGTMEWDEEKH
TGSTVLATVPDVDNPNEGRLLREMGYAEKAPVAGRYKMGDDGALTLTTEYETMWSEERLWFASPNLRMRVSVLKRFGGFS
MASFTSEIRMGGSPAAAKAEEAANSASS

Sequences:

>Translated_188_residues
MNIEEFFELSAGKWFSHRTSHHLAFKQSEDGKSDLVIESLAADHPEVIKLCELYEVPASAASCGARVSWNGTMEWDEEKH
TGSTVLATVPDVDNPNEGRLLREMGYAEKAPVAGRYKMGDDGALTLTTEYETMWSEERLWFASPNLRMRVSVLKRFGGFS
MASFTSEIRMGGSPAAAKAEEAANSASS
>Mature_188_residues
MNIEEFFELSAGKWFSHRTSHHLAFKQSEDGKSDLVIESLAADHPEVIKLCELYEVPASAASCGARVSWNGTMEWDEEKH
TGSTVLATVPDVDNPNEGRLLREMGYAEKAPVAGRYKMGDDGALTLTTEYETMWSEERLWFASPNLRMRVSVLKRFGGFS
MASFTSEIRMGGSPAAAKAEEAANSASS

Specific function: Catalyzes the site-selective attachment of phycocyanobilin (PCB) to 'Cys-82' in CpcB and 'Cys-83' in PecB. Also able to add PCB to ApcA1, ApcA2, ApcB, ApcD and ApcF, but not PecA. In vitro can be made to add phycoerythrobilin, a non- physiological substra

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPCS1_NOSS1 (Q8YZ70)

Other databases:

- EMBL:   BA000019
- PIR:   AH1883
- RefSeq:   NP_484661.1
- ProteinModelPortal:   Q8YZ70
- SMR:   Q8YZ70
- STRING:   Q8YZ70
- GeneID:   1104213
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr0617
- NMPDR:   fig|103690.1.peg.928
- eggNOG:   NOG12629
- HOGENOM:   HBG442183
- OMA:   HHLAFRR
- ProtClustDB:   CLSK424620
- BioCyc:   NSP103690:ALR0617-MONOMER
- GO:   GO:0005488
- HAMAP:   MF_01459
- InterPro:   IPR012674
- InterPro:   IPR018536
- Gene3D:   G3DSA:2.40.128.20

Pfam domain/function: PF09367 CpeS

EC number: NA

Molecular weight: Translated: 20704; Mature: 20704

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEEFFELSAGKWFSHRTSHHLAFKQSEDGKSDLVIESLAADHPEVIKLCELYEVPASA
CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCH
ASCGARVSWNGTMEWDEEKHTGSTVLATVPDVDNPNEGRLLREMGYAEKAPVAGRYKMGD
HHCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCEEECC
DGALTLTTEYETMWSEERLWFASPNLRMRVSVLKRFGGFSMASFTSEIRMGGSPAAAKAE
CCEEEEEECHHHHHCCCEEEEECCCCEEHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH
EAANSASS
HHHCCCCC
>Mature Secondary Structure
MNIEEFFELSAGKWFSHRTSHHLAFKQSEDGKSDLVIESLAADHPEVIKLCELYEVPASA
CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCH
ASCGARVSWNGTMEWDEEKHTGSTVLATVPDVDNPNEGRLLREMGYAEKAPVAGRYKMGD
HHCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCEEECC
DGALTLTTEYETMWSEERLWFASPNLRMRVSVLKRFGGFSMASFTSEIRMGGSPAAAKAE
CCEEEEEECHHHHHCCCEEEEECCCCEEHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH
EAANSASS
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840