| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228110
Identifier: 17228110
GI number: 17228110
Start: 714771
End: 715232
Strand: Direct
Name: 17228110
Synonym: alr0614
Alternate gene names: NA
Gene position: 714771-715232 (Clockwise)
Preceding gene: 17228109
Following gene: 17228112
Centisome position: 11.14
GC content: 39.83
Gene sequence:
>462_bases ATGGCAGAATTCTTTGAATTTGAATCAGATTTTGTTGATTCCCTGCGCTGCATACCTATGCAGGTGCGCTATAAACTTGA TACCTGCGGCATTAAGCTAAAATTAGCTGACTGGAACCAGATGACTCAAGCCGAAAGAGAGGCTTTAGTTGAATTACCTT GCACGACAGCAGCAGAAATTCAATCTTACCAAGAATATATCCAACATTTAATTATCAATCGAACTGGTACACCACCTGGA AATTTACCGATTGACTCTAAGCCAGCTTGGCTAGACTCTAGCAGCATACCAGATAGCATTGAAGATAAAGCTCAAGAAAT AGGCGTGACTTTAACTTTGTCACAGTGGGTAAATTTAACGCCCTTACAACGTTTTGCTTTAATTAAACTCAGCCGTTCAG GACATGAAAACAAAAATTTTCCCAAGGCGATCGCCGAGTTTAATATAAGTAGAATAGGGTAG
Upstream 100 bases:
>100_bases ACTTGTTTTAAATATATTTTAAAATACTCCATTTTTTGTTATCATTCTAATTTAATAGAAGCAATTTTGGTATTGAAATT ATAATTTCAATCGCTCATTT
Downstream 100 bases:
>100_bases GTAATTAAAGGTTTGTAGTGAGGAATTTAGTTTTCTCTGCGAGACGCTCCGCGAACAAAAAAAGACTAAAGTCCTTACTA CTAACTCAATCCCATTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAEFFEFESDFVDSLRCIPMQVRYKLDTCGIKLKLADWNQMTQAEREALVELPCTTAAEIQSYQEYIQHLIINRTGTPPG NLPIDSKPAWLDSSSIPDSIEDKAQEIGVTLTLSQWVNLTPLQRFALIKLSRSGHENKNFPKAIAEFNISRIG
Sequences:
>Translated_153_residues MAEFFEFESDFVDSLRCIPMQVRYKLDTCGIKLKLADWNQMTQAEREALVELPCTTAAEIQSYQEYIQHLIINRTGTPPG NLPIDSKPAWLDSSSIPDSIEDKAQEIGVTLTLSQWVNLTPLQRFALIKLSRSGHENKNFPKAIAEFNISRIG >Mature_152_residues AEFFEFESDFVDSLRCIPMQVRYKLDTCGIKLKLADWNQMTQAEREALVELPCTTAAEIQSYQEYIQHLIINRTGTPPGN LPIDSKPAWLDSSSIPDSIEDKAQEIGVTLTLSQWVNLTPLQRFALIKLSRSGHENKNFPKAIAEFNISRIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17345; Mature: 17214
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFFEFESDFVDSLRCIPMQVRYKLDTCGIKLKLADWNQMTQAEREALVELPCTTAAEI CCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHH QSYQEYIQHLIINRTGTPPGNLPIDSKPAWLDSSSIPDSIEDKAQEIGVTLTLSQWVNLT HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEHHHCCCCC PLQRFALIKLSRSGHENKNFPKAIAEFNISRIG HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AEFFEFESDFVDSLRCIPMQVRYKLDTCGIKLKLADWNQMTQAEREALVELPCTTAAEI CCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHH QSYQEYIQHLIINRTGTPPGNLPIDSKPAWLDSSSIPDSIEDKAQEIGVTLTLSQWVNLT HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEHHHCCCCC PLQRFALIKLSRSGHENKNFPKAIAEFNISRIG HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA