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The map label for this gene is sepF [H]

Identifier: 17227983

GI number: 17227983

Start: 582043

End: 582639

Strand: Direct

Name: sepF [H]

Synonym: alr0487

Alternate gene names: 17227983

Gene position: 582043-582639 (Clockwise)

Preceding gene: 17227982

Following gene: 17227984

Centisome position: 9.07

GC content: 47.24

Gene sequence:

>597_bases
ATGAACAATATATTTTCTAAACTGCGAGACTTTGTTGGTCTCAACGAGCAGGTAGAATACGAGTACTACGAAGAAGAGGC
AGATACAGATAACTACCAAAACCTGTATCAACAAGAAAATCCCCAACCAGCACCAGCAGAGGCTGCCCCAAACAATCGAC
GTTGGCGCGAACCCATGACTACAATGGGTGATGACGTAGCAGCAGGAACAAAATCGGCGATGGGGAATGTGATTGGTATG
CCAGGAGCAATTAACGGAATTTCTGAAGTATTGGTGCTTGAACCTCGTACATTTGAAGAAATGCCCCAGGCAATTCAAGC
ATTGCGTGAACGTAAATCAGTAGTGCTGAACTTGACCATCATGGACCCAGATCAAGCACAAAGAGCTGTTGATTTTGTTG
CAGGTGGAACCTACGCGCTAGATGGACATCAAGAACGGATTGGCGAAAGTATCTTTTTGTTTACCCCCAGCTGTGTGCAA
GTCAGCACCCAAGGTGGAGTTATTCATGAAGTACCCCAACCCCCAGCACGTCCAGCACGACCAGCTTCAACTAATCCGCC
AGCTTGGGGCAACGAAACCAACCGGATGGCACAATAA

Upstream 100 bases:

>100_bases
GATAAAATTAATAGGCTATTTGCCCTTAGTAGCTAGTTAAACAGCTACATTAACGATTAACCGGATAATTAGAGGCAATT
TGCAGAAGGAGTGCAACTAA

Downstream 100 bases:

>100_bases
AGTTAAATTAGTCATTAGTCCATAGTCAAGAGTCCAAATGAGAAAATTTTTGACTATTGACTATTGATTAACGAATAACG
ACTAACGACTAACGACTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMTTMGDDVAAGTKSAMGNVIGM
PGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTIMDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQ
VSTQGGVIHEVPQPPARPARPASTNPPAWGNETNRMAQ

Sequences:

>Translated_198_residues
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMTTMGDDVAAGTKSAMGNVIGM
PGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTIMDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQ
VSTQGGVIHEVPQPPARPARPASTNPPAWGNETNRMAQ
>Mature_198_residues
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMTTMGDDVAAGTKSAMGNVIGM
PGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTIMDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQ
VSTQGGVIHEVPQPPARPARPASTNPPAWGNETNRMAQ

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA [H]

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023052
- InterPro:   IPR007561 [H]

Pfam domain/function: PF04472 DUF552 [H]

EC number: NA

Molecular weight: Translated: 21908; Mature: 21908

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMT
CCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCHH
TMGDDVAAGTKSAMGNVIGMPGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTI
HCCCHHHHCCHHHHCCCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCEEEEEEE
MDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQVSTQGGVIHEVPQPPARPAR
ECCHHHHHHHHHHCCCEEEECCHHHHHCCEEEEECCCCEEEECCCCEEECCCCCCCCCCC
PASTNPPAWGNETNRMAQ
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNIFSKLRDFVGLNEQVEYEYYEEEADTDNYQNLYQQENPQPAPAEAAPNNRRWREPMT
CCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCHH
TMGDDVAAGTKSAMGNVIGMPGAINGISEVLVLEPRTFEEMPQAIQALRERKSVVLNLTI
HCCCHHHHCCHHHHCCCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHHCCCEEEEEEE
MDPDQAQRAVDFVAGGTYALDGHQERIGESIFLFTPSCVQVSTQGGVIHEVPQPPARPAR
ECCHHHHHHHHHHCCCEEEECCHHHHHCCEEEEECCCCEEEECCCCEEECCCCCCCCCCC
PASTNPPAWGNETNRMAQ
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA