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The map label for this gene is 17227827

Identifier: 17227827

GI number: 17227827

Start: 381135

End: 383420

Strand: Direct

Name: 17227827

Synonym: alr0331

Alternate gene names: NA

Gene position: 381135-383420 (Clockwise)

Preceding gene: 17227814

Following gene: 17227831

Centisome position: 5.94

GC content: 45.36

Gene sequence:

>2286_bases
ATGACACCGGATACTCTGACTAACCCGGATAAAATCTTCTTGGATGGCAAAACTTTTATCCCCGCCGATCAATTACCGAT
TCCCGAATGGCCTTGTGTGGTGAGCGAAAGACCACAACCAACGCTGACGGTTAAGGATGATGATTTATTTTTAGTTACAG
ACACAATTGGGAATATCTCTGGTTGTTCTCTAAGTGAGGGCAACCCTAGTATGGGTTTATTTTGTTGTGACACGCGATTT
CTCAATCGGTTGGAGTTACAAATTGATGGGCGATCGCCTGTGCTGCTCAGTAGTACTGCGGAAAAAGGTTTTGCCCTGTC
GGTTTTGTGTACTAATCCCAGAATCGACGAACGCATGAAGGCTGATAGCGTGAGTATTCGCCGGGAGTTGGTACTTAACG
GTGCTTTATTTGAAGAAATCGAGGTGGCTAACTACAGCACAACGACTGTTGCCTTTGAACTCAGTATCAGTTTTGATGCC
GATTTTGTGGATTTATTTGAAGTCCGGGGTTACAACAGAGACAAACGGGGTAAGCTTTTACGCCTAGTAGAACCAATTGC
TGAGGATGGATTGGTTGATGGTGACGGTGCTGCTGTACACACCCAGCATTTTGCCCACAAAGAACAGTCTTTAACCCTAG
CCTATCAAGGTCTAGATGGTTCGGTGATGGAATCTCGTATCCAATTCCAGCATCGCCAACCAGATGATTTTAAAGGTTAC
ACAGCGATTTGGCGCTTAGAGTTGCCTTCTCACTCCACCCAAAAGCTCGGCTATCGGGTGAATATGTTCACCAATAACAA
CTCTAGTTCTAGGGTGAGTGCGGCTGTAACTTTAGTACAAGCCAAAGCATCCGAGATGATGGAAGAACAAAACTGGGTAC
AGAAAATTACTAATATTCGTGCCGATAAAAGTATCTTCAATCTGGTAATTGAACGCGCTGAACAGGATATGTATTTGTTA
CGCCAATCTTTTGACAAATACAAAACTGTTTCCGCCGGTGTACCTTGGTTTTCGGCTTTGTTTGGGCGAGATTCCTTGAT
CACAGCTTCCCAAACCTTGATGCTTAACCCCGAAATCGCCAAGGAAACCTTGATGTTGCTGGCAGCTTACCAAGGCAAAC
ATGAGGATGAGTGGCGGGAAGAAGCACCGGGAAAAATTCTACACGAGTTACGTTTGGGAGAAATGGCCAGATGTCAGGAA
ATTCCCCATACACCATACTACGGTACAGTTGATGCCACTCCCCTGTGGTTGATGTTGTATTCTGAATACTATTCTTGGAC
TCATGACCGAGAAACTTTAGAGCAACTATGGCCTCATGCCCTAGCTGCAATGGATTGGATTGACCGGAATATGCAGCCAA
GCGGTTATCTTACCTACCATCGCAAATCTAAACGTGGTCTAGATAACCAAGGCTGGAAAGATTCTGGTGATTGCATCGTA
GACCGTAAGGGCGATTTAGCTAACGGTTCCATAGCCTTGAGTGAGGTACAAGCTTACGTTTACGCCGCCAAAACTCGTCT
AGCAGAAATCGCTAGGATGAAGAAGCGCCTAGACTTATTTGAACGGTGGCAAGAAGAAGCCAGAAGCTTGAAGGAGCGTT
TTAACCAAGATTTTTGGATCGAAGACCAAGATTTCTGCGCTTTGGCTTTAGATGGTGCAGGTAAGCAGGTAGACAGTATT
ACATCTAATCCTGGTCATTGCCTACTTTTGGGGATTTTTACACCAGAGAGAGCCTACAGCGTGGCAGAACGTTTACGCGC
CCCAGATATGTTTAACGGTTGGGGGATTCGCACCTTAAGTAGTTTGTCACCTGCTTACAATCCGATGGGCTATCACATTG
GTTCGGTGTGGCCTCATGATAATTCTTTGATTGCTATGGGATTGCGATCGCTCGGTTTAATTGACCAAGCTTTAGAAATC
TTCCAAGGTTTGTTGGATATGACGAGCCAACAACCTTACCAGCGTCCCCCAGAATTATTTTGCGGTTATGAGCGTAACGG
CGATCGCTCTCCTGTACAATATCCTGTTGCTTGTACACCCCAAGCCTGGGCTACTGGTAGTATTTTTCAATTAATTCAAA
TGATTGTCAATCTCGTACCTGACGCGCCTAATAACTGCTTACGCATTATCGACCCGGCTTTACCAGAGTCAATTAGTAGA
TTGTCATTGCACAATCTCCAAGTTGGTACTACAGTCTTGGATCTAGAATTCGAGCGTTCCGGTGGTACTACTGCTTGTCG
AGTCGCCAGAAAACGCGGCAATCTACGGGTAGTAATTGAGGCTTAA

Upstream 100 bases:

>100_bases
AAGCTAGGAGTCTATTGGTTTAATTCTCGCTCAAGCATATTCTCCCAACTAACGCTGATACGATCACTAAAATTTAGACC
TGTACACGGAATTTTTGCTA

Downstream 100 bases:

>100_bases
AAAAGGGGATGTAAGCTAATGCGCGCCTAAATTGCATAACTACTAATAAGGGCTGTTGACTCTTGACGATCAACAGCCCT
ATTCTAATTGCTGATCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Glycogen Debranching -Like Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 761; Mature: 760

Protein sequence:

>761_residues
MTPDTLTNPDKIFLDGKTFIPADQLPIPEWPCVVSERPQPTLTVKDDDLFLVTDTIGNISGCSLSEGNPSMGLFCCDTRF
LNRLELQIDGRSPVLLSSTAEKGFALSVLCTNPRIDERMKADSVSIRRELVLNGALFEEIEVANYSTTTVAFELSISFDA
DFVDLFEVRGYNRDKRGKLLRLVEPIAEDGLVDGDGAAVHTQHFAHKEQSLTLAYQGLDGSVMESRIQFQHRQPDDFKGY
TAIWRLELPSHSTQKLGYRVNMFTNNNSSSRVSAAVTLVQAKASEMMEEQNWVQKITNIRADKSIFNLVIERAEQDMYLL
RQSFDKYKTVSAGVPWFSALFGRDSLITASQTLMLNPEIAKETLMLLAAYQGKHEDEWREEAPGKILHELRLGEMARCQE
IPHTPYYGTVDATPLWLMLYSEYYSWTHDRETLEQLWPHALAAMDWIDRNMQPSGYLTYHRKSKRGLDNQGWKDSGDCIV
DRKGDLANGSIALSEVQAYVYAAKTRLAEIARMKKRLDLFERWQEEARSLKERFNQDFWIEDQDFCALALDGAGKQVDSI
TSNPGHCLLLGIFTPERAYSVAERLRAPDMFNGWGIRTLSSLSPAYNPMGYHIGSVWPHDNSLIAMGLRSLGLIDQALEI
FQGLLDMTSQQPYQRPPELFCGYERNGDRSPVQYPVACTPQAWATGSIFQLIQMIVNLVPDAPNNCLRIIDPALPESISR
LSLHNLQVGTTVLDLEFERSGGTTACRVARKRGNLRVVIEA

Sequences:

>Translated_761_residues
MTPDTLTNPDKIFLDGKTFIPADQLPIPEWPCVVSERPQPTLTVKDDDLFLVTDTIGNISGCSLSEGNPSMGLFCCDTRF
LNRLELQIDGRSPVLLSSTAEKGFALSVLCTNPRIDERMKADSVSIRRELVLNGALFEEIEVANYSTTTVAFELSISFDA
DFVDLFEVRGYNRDKRGKLLRLVEPIAEDGLVDGDGAAVHTQHFAHKEQSLTLAYQGLDGSVMESRIQFQHRQPDDFKGY
TAIWRLELPSHSTQKLGYRVNMFTNNNSSSRVSAAVTLVQAKASEMMEEQNWVQKITNIRADKSIFNLVIERAEQDMYLL
RQSFDKYKTVSAGVPWFSALFGRDSLITASQTLMLNPEIAKETLMLLAAYQGKHEDEWREEAPGKILHELRLGEMARCQE
IPHTPYYGTVDATPLWLMLYSEYYSWTHDRETLEQLWPHALAAMDWIDRNMQPSGYLTYHRKSKRGLDNQGWKDSGDCIV
DRKGDLANGSIALSEVQAYVYAAKTRLAEIARMKKRLDLFERWQEEARSLKERFNQDFWIEDQDFCALALDGAGKQVDSI
TSNPGHCLLLGIFTPERAYSVAERLRAPDMFNGWGIRTLSSLSPAYNPMGYHIGSVWPHDNSLIAMGLRSLGLIDQALEI
FQGLLDMTSQQPYQRPPELFCGYERNGDRSPVQYPVACTPQAWATGSIFQLIQMIVNLVPDAPNNCLRIIDPALPESISR
LSLHNLQVGTTVLDLEFERSGGTTACRVARKRGNLRVVIEA
>Mature_760_residues
TPDTLTNPDKIFLDGKTFIPADQLPIPEWPCVVSERPQPTLTVKDDDLFLVTDTIGNISGCSLSEGNPSMGLFCCDTRFL
NRLELQIDGRSPVLLSSTAEKGFALSVLCTNPRIDERMKADSVSIRRELVLNGALFEEIEVANYSTTTVAFELSISFDAD
FVDLFEVRGYNRDKRGKLLRLVEPIAEDGLVDGDGAAVHTQHFAHKEQSLTLAYQGLDGSVMESRIQFQHRQPDDFKGYT
AIWRLELPSHSTQKLGYRVNMFTNNNSSSRVSAAVTLVQAKASEMMEEQNWVQKITNIRADKSIFNLVIERAEQDMYLLR
QSFDKYKTVSAGVPWFSALFGRDSLITASQTLMLNPEIAKETLMLLAAYQGKHEDEWREEAPGKILHELRLGEMARCQEI
PHTPYYGTVDATPLWLMLYSEYYSWTHDRETLEQLWPHALAAMDWIDRNMQPSGYLTYHRKSKRGLDNQGWKDSGDCIVD
RKGDLANGSIALSEVQAYVYAAKTRLAEIARMKKRLDLFERWQEEARSLKERFNQDFWIEDQDFCALALDGAGKQVDSIT
SNPGHCLLLGIFTPERAYSVAERLRAPDMFNGWGIRTLSSLSPAYNPMGYHIGSVWPHDNSLIAMGLRSLGLIDQALEIF
QGLLDMTSQQPYQRPPELFCGYERNGDRSPVQYPVACTPQAWATGSIFQLIQMIVNLVPDAPNNCLRIIDPALPESISRL
SLHNLQVGTTVLDLEFERSGGTTACRVARKRGNLRVVIEA

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85868; Mature: 85737

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDTLTNPDKIFLDGKTFIPADQLPIPEWPCVVSERPQPTLTVKDDDLFLVTDTIGNIS
CCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCC
GCSLSEGNPSMGLFCCDTRFLNRLELQIDGRSPVLLSSTAEKGFALSVLCTNPRIDERMK
CCCCCCCCCCCEEEEECHHHCCEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCHHHHH
ADSVSIRRELVLNGALFEEIEVANYSTTTVAFELSISFDADFVDLFEVRGYNRDKRGKLL
HHHHHHHHHHHHCCHHHHHEEECCCEEEEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHH
RLVEPIAEDGLVDGDGAAVHTQHFAHKEQSLTLAYQGLDGSVMESRIQFQHRQPDDFKGY
HHHHHHHHCCCCCCCCCEEEHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC
TAIWRLELPSHSTQKLGYRVNMFTNNNSSSRVSAAVTLVQAKASEMMEEQNWVQKITNIR
EEEEEEECCCCCCHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADKSIFNLVIERAEQDMYLLRQSFDKYKTVSAGVPWFSALFGRDSLITASQTLMLNPEIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCEEEECHHHH
KETLMLLAAYQGKHEDEWREEAPGKILHELRLGEMARCQEIPHTPYYGTVDATPLWLMLY
HHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHH
SEYYSWTHDRETLEQLWPHALAAMDWIDRNMQPSGYLTYHRKSKRGLDNQGWKDSGDCIV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCCCCCCEEE
DRKGDLANGSIALSEVQAYVYAAKTRLAEIARMKKRLDLFERWQEEARSLKERFNQDFWI
ECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EDQDFCALALDGAGKQVDSITSNPGHCLLLGIFTPERAYSVAERLRAPDMFNGWGIRTLS
CCCCCEEEEECCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHH
SLSPAYNPMGYHIGSVWPHDNSLIAMGLRSLGLIDQALEIFQGLLDMTSQQPYQRPPELF
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHE
CGYERNGDRSPVQYPVACTPQAWATGSIFQLIQMIVNLVPDAPNNCLRIIDPALPESISR
ECCCCCCCCCCCEECEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHH
LSLHNLQVGTTVLDLEFERSGGTTACRVARKRGNLRVVIEA
HHHCCEEECCEEEEEEEECCCCCHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure 
TPDTLTNPDKIFLDGKTFIPADQLPIPEWPCVVSERPQPTLTVKDDDLFLVTDTIGNIS
CCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCC
GCSLSEGNPSMGLFCCDTRFLNRLELQIDGRSPVLLSSTAEKGFALSVLCTNPRIDERMK
CCCCCCCCCCCEEEEECHHHCCEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCHHHHH
ADSVSIRRELVLNGALFEEIEVANYSTTTVAFELSISFDADFVDLFEVRGYNRDKRGKLL
HHHHHHHHHHHHCCHHHHHEEECCCEEEEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHH
RLVEPIAEDGLVDGDGAAVHTQHFAHKEQSLTLAYQGLDGSVMESRIQFQHRQPDDFKGY
HHHHHHHHCCCCCCCCCEEEHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC
TAIWRLELPSHSTQKLGYRVNMFTNNNSSSRVSAAVTLVQAKASEMMEEQNWVQKITNIR
EEEEEEECCCCCCHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADKSIFNLVIERAEQDMYLLRQSFDKYKTVSAGVPWFSALFGRDSLITASQTLMLNPEIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCEEEECHHHH
KETLMLLAAYQGKHEDEWREEAPGKILHELRLGEMARCQEIPHTPYYGTVDATPLWLMLY
HHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHH
SEYYSWTHDRETLEQLWPHALAAMDWIDRNMQPSGYLTYHRKSKRGLDNQGWKDSGDCIV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCCCCCCEEE
DRKGDLANGSIALSEVQAYVYAAKTRLAEIARMKKRLDLFERWQEEARSLKERFNQDFWI
ECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EDQDFCALALDGAGKQVDSITSNPGHCLLLGIFTPERAYSVAERLRAPDMFNGWGIRTLS
CCCCCEEEEECCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHH
SLSPAYNPMGYHIGSVWPHDNSLIAMGLRSLGLIDQALEIFQGLLDMTSQQPYQRPPELF
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHE
CGYERNGDRSPVQYPVACTPQAWATGSIFQLIQMIVNLVPDAPNNCLRIIDPALPESISR
ECCCCCCCCCCCEECEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHH
LSLHNLQVGTTVLDLEFERSGGTTACRVARKRGNLRVVIEA
HHHCCEEECCEEEEEEEECCCCCHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA