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The map label for this gene is ccmK4 [H]

Identifier: 17227814

GI number: 17227814

Start: 361620

End: 361973

Strand: Direct

Name: ccmK4 [H]

Synonym: alr0318

Alternate gene names: 17227814

Gene position: 361620-361973 (Clockwise)

Preceding gene: 17227813

Following gene: 17227827

Centisome position: 5.64

GC content: 46.61

Gene sequence:

>354_bases
ATGTCGTCACTACAGGCAATAGGAGCATTAGAGACTAAGGGATTTCCGGCTGTGTTAGCAGCAGCAGATGCTATGGTCAA
AGCTGGCCGTGTCACCCTTGTGGGTTATATCCGAGTTGGTAGCGCTCGTTTTACAGTCAATATCCGTGGGGATGTTTCGG
AAGTTAAGACAGCGATGGCGGCTGGTGTGGAAGCGGCACAAAATGTTTATGGTGGTACATTAGAGTCCTGGGTGATTATT
CCTCGCCCTCATGAAAACGTTGAAGCAGTCCTACCCATAGGTTATACAGATGCTGTTCAACAATATCGAGATTCTGTAGA
AAATCCCATTATCCGTTCATCCAACAGACGATAA

Upstream 100 bases:

>100_bases
CGGATGTTCTAAGCAATTGTGTCATCAAAATATGTAGCAAAGCTTCATACAATGAACTGGTGCGCTCCATAAATTTATTA
TTCATACAGGAGATTATTAA

Downstream 100 bases:

>100_bases
ATAATACGAATTCAAAATTAAAGCAAAACCCCGGTTTCTCAACGAAATCGGGGTTTTTAGATTGAACATTATTTTTACCA
ACCACCAACTTTAGTCTCAT

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSSLQAIGALETKGFPAVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMAAGVEAAQNVYGGTLESWVII
PRPHENVEAVLPIGYTDAVQQYRDSVENPIIRSSNRR

Sequences:

>Translated_117_residues
MSSLQAIGALETKGFPAVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMAAGVEAAQNVYGGTLESWVII
PRPHENVEAVLPIGYTDAVQQYRDSVENPIIRSSNRR
>Mature_116_residues
SSLQAIGALETKGFPAVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMAAGVEAAQNVYGGTLESWVIIP
RPHENVEAVLPIGYTDAVQQYRDSVENPIIRSSNRR

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=92, Percent_Identity=47.8260869565217, Blast_Score=75, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 12487; Mature: 12356

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLQAIGALETKGFPAVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMA
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEECCCHHHHHHHHH
AGVEAAQNVYGGTLESWVIIPRPHENVEAVLPIGYTDAVQQYRDSVENPIIRSSNRR
HHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SSLQAIGALETKGFPAVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEECCCHHHHHHHHH
AGVEAAQNVYGGTLESWVIIPRPHENVEAVLPIGYTDAVQQYRDSVENPIIRSSNRR
HHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]