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The map label for this gene is amyM [H]

Identifier: 17227665

GI number: 17227665

Start: 177701

End: 179629

Strand: Direct

Name: amyM [H]

Synonym: alr0169

Alternate gene names: 17227665

Gene position: 177701-179629 (Clockwise)

Preceding gene: 17227661

Following gene: 17227671

Centisome position: 2.77

GC content: 42.09

Gene sequence:

>1929_bases
ATGGTACAAACACCACCATCACAATTTTCCGAAGAACAATACAAAATCGAAAATGCTAATGCAGAGGTACAAGCATTAAT
CGAATCACCTACGCCAGAGACAGAAATAGATTTAGAATTTCTCTACACTAGGGATATTGAATTTCGCCAAGAAACTATTT
ACTTTCTAGTAGTTGATCGCTTTTATGATGGCGACCCTGAAAATAGCGAAGGCTATAATCCAGAACTTTATGACCCAAAT
GGAGAAGATTGGGGTAAGTATTGGGGAGGCGACTTACAAGGAGTTATTGATAAATTAGACTATCTAAAAGATATGGGAGT
AACCGCACTTTGGTTAACTCCTTTATTTGAACAAGTCGAAGAATTATTTGTTGGTAACGCCGCCATGCACGGCTATTGGA
CAAAAGATTTTAAACGGCTGAATCCCCGCTACATTGGTAAGGATGAAAATCCTTCTTTAAACAATACTCAAGAAACCAGA
AATACTACTTTTGACCGCTTAGTTACAGAATTACACAAGCGGAAAATGAAGCTCATACTTGATATCGTCTGCAACCATAG
CAGTCCTGATACTAGTGGTAGCAAAGGCGAATTATATGATGATGGGGTAAAAATCGCCGACTTTAATAATGATGTGAATC
ATTGGTATCATCACTATGGTGAAGTTGAAGATTGGGAAGATGATTGGCAAGTCCAAAACTGTGAACTTTCAGGACTGGCA
ACTTTTAACGAAAACAATACTGAATATCGTCAATACATCAAGTTGGCAATTAAGCAATGGCTAGACCGGGGTGTGGATGC
ACTGCGGGTAGATACAGTCAAACATATGCCGATTTGGTTTTGGCAAGAATTTACTGGTGATATGTATAATCACAAACCAG
ATGTGTTTATTTTTGGTGAGTGGATTTACAATCATCCCAGTGACGATCTTTCGGTGGAATTTGCCAATAATTCCGGCATG
ACTTTACTTGATTTTGGTCTGTGCGTAGCAATTCGCGGCGCACTAGCCCAAGGCGCAGAAGGGGGATTCCACCTCATCCA
AGAAGTATTTGACCAAGATTATCGCTACAACGGAGCTACAGAGTTAATCACCTTTGTTGATAACCATGATATGCCCCGCT
TTCAATCCCTCAATCCTGATCCGGCGATGTTGAAAGTAGCGATCGCCCTGATTATGACATCACGGGGTATTCCATGTATC
TATTACGGTACAGAACAATATCTGCATGATGATACTAACGGCGGTAATGACCCCTATAACCGCCCCATGATGGGAAATTG
GGATACTGATACTGAGGTGTATAGATACCTCCGATTGTTGTCTGGTATCCGGCGGTTAAATCCAGCCATCTCTATGGGTA
GCCAGTGGCAAAAATACCTCACATCTGATGTTTACTGTTATGTCCGCCGTTATCGTTCTTCTGTTTGCTTCGTCGCCCTC
AACCGGGGTGCAGAACTCATCTTACCAGAAGTCCAAACAGACTTACCAGATGGTGAACATACTTGCGCCGTGACTCGGAA
TAAATTTGAGGTAAAAGACGGTAAGATTTACAATCTGCAACTCGAAGAACGGGGAGTCATGGTTTTAAGTCATGTAGGTG
AACGGGTAAAAGCGCAAACAATAGTCCGCGTTCAACTTAATGGTGTACATACTCAACCCGGTGAAACTATCGTAGTTGTC
GGCGACTGTCCAGAATTGGGTAACTGGGATATTAGTAAAGCCTATCCCCTGGAATACATCAACTCTAATACTTGGTTTGC
CGAAATACCATTTGATGAAAGCGCAGGTAAACTCATCAGTTATAAATATGCCATGTGGCGTGAAGGGCGATCGCCTCTGC
GAGAAAATATCTTAAATCGTCGTTGGGTAGTGGCGAAGGAAGGCACAGTTAAATGGCGTGATACTTGGGCTTCTGGGAGA
GAATCTTAA

Upstream 100 bases:

>100_bases
TTAGATAGATAATACCTATGGTTTACAGAAATGCGGAAATACAAAAACTTGTATCTCTGTTTATACATACTTTATATCGC
ATTAAAAATTGCATTTTTTT

Downstream 100 bases:

>100_bases
CTTGAAAGAAGGGTGAAGTAGATAAAAAAATAGGGAAGATTTGTTGATCTTCCCCGCTTTGATTATTCTTTTTCTTGTCT
GGCTTGTTAGCTTCTTTGAG

Product: cyclomaltodextrin glucanotransferase

Products: NA

Alternate protein names: Glucan 1,4-alpha-maltohydrolase [H]

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MVQTPPSQFSEEQYKIENANAEVQALIESPTPETEIDLEFLYTRDIEFRQETIYFLVVDRFYDGDPENSEGYNPELYDPN
GEDWGKYWGGDLQGVIDKLDYLKDMGVTALWLTPLFEQVEELFVGNAAMHGYWTKDFKRLNPRYIGKDENPSLNNTQETR
NTTFDRLVTELHKRKMKLILDIVCNHSSPDTSGSKGELYDDGVKIADFNNDVNHWYHHYGEVEDWEDDWQVQNCELSGLA
TFNENNTEYRQYIKLAIKQWLDRGVDALRVDTVKHMPIWFWQEFTGDMYNHKPDVFIFGEWIYNHPSDDLSVEFANNSGM
TLLDFGLCVAIRGALAQGAEGGFHLIQEVFDQDYRYNGATELITFVDNHDMPRFQSLNPDPAMLKVAIALIMTSRGIPCI
YYGTEQYLHDDTNGGNDPYNRPMMGNWDTDTEVYRYLRLLSGIRRLNPAISMGSQWQKYLTSDVYCYVRRYRSSVCFVAL
NRGAELILPEVQTDLPDGEHTCAVTRNKFEVKDGKIYNLQLEERGVMVLSHVGERVKAQTIVRVQLNGVHTQPGETIVVV
GDCPELGNWDISKAYPLEYINSNTWFAEIPFDESAGKLISYKYAMWREGRSPLRENILNRRWVVAKEGTVKWRDTWASGR
ES

Sequences:

>Translated_642_residues
MVQTPPSQFSEEQYKIENANAEVQALIESPTPETEIDLEFLYTRDIEFRQETIYFLVVDRFYDGDPENSEGYNPELYDPN
GEDWGKYWGGDLQGVIDKLDYLKDMGVTALWLTPLFEQVEELFVGNAAMHGYWTKDFKRLNPRYIGKDENPSLNNTQETR
NTTFDRLVTELHKRKMKLILDIVCNHSSPDTSGSKGELYDDGVKIADFNNDVNHWYHHYGEVEDWEDDWQVQNCELSGLA
TFNENNTEYRQYIKLAIKQWLDRGVDALRVDTVKHMPIWFWQEFTGDMYNHKPDVFIFGEWIYNHPSDDLSVEFANNSGM
TLLDFGLCVAIRGALAQGAEGGFHLIQEVFDQDYRYNGATELITFVDNHDMPRFQSLNPDPAMLKVAIALIMTSRGIPCI
YYGTEQYLHDDTNGGNDPYNRPMMGNWDTDTEVYRYLRLLSGIRRLNPAISMGSQWQKYLTSDVYCYVRRYRSSVCFVAL
NRGAELILPEVQTDLPDGEHTCAVTRNKFEVKDGKIYNLQLEERGVMVLSHVGERVKAQTIVRVQLNGVHTQPGETIVVV
GDCPELGNWDISKAYPLEYINSNTWFAEIPFDESAGKLISYKYAMWREGRSPLRENILNRRWVVAKEGTVKWRDTWASGR
ES
>Mature_642_residues
MVQTPPSQFSEEQYKIENANAEVQALIESPTPETEIDLEFLYTRDIEFRQETIYFLVVDRFYDGDPENSEGYNPELYDPN
GEDWGKYWGGDLQGVIDKLDYLKDMGVTALWLTPLFEQVEELFVGNAAMHGYWTKDFKRLNPRYIGKDENPSLNNTQETR
NTTFDRLVTELHKRKMKLILDIVCNHSSPDTSGSKGELYDDGVKIADFNNDVNHWYHHYGEVEDWEDDWQVQNCELSGLA
TFNENNTEYRQYIKLAIKQWLDRGVDALRVDTVKHMPIWFWQEFTGDMYNHKPDVFIFGEWIYNHPSDDLSVEFANNSGM
TLLDFGLCVAIRGALAQGAEGGFHLIQEVFDQDYRYNGATELITFVDNHDMPRFQSLNPDPAMLKVAIALIMTSRGIPCI
YYGTEQYLHDDTNGGNDPYNRPMMGNWDTDTEVYRYLRLLSGIRRLNPAISMGSQWQKYLTSDVYCYVRRYRSSVCFVAL
NRGAELILPEVQTDLPDGEHTCAVTRNKFEVKDGKIYNLQLEERGVMVLSHVGERVKAQTIVRVQLNGVHTQPGETIVVV
GDCPELGNWDISKAYPLEYINSNTWFAEIPFDESAGKLISYKYAMWREGRSPLRENILNRRWVVAKEGTVKWRDTWASGR
ES

Specific function: Converts starch into maltose [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 IPT/TIG domain [H]

Homologues:

Organism=Escherichia coli, GI1789995, Length=306, Percent_Identity=26.4705882352941, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1790687, Length=194, Percent_Identity=29.3814432989691, Blast_Score=72, Evalue=9e-14,
Organism=Drosophila melanogaster, GI221330053, Length=205, Percent_Identity=30.2439024390244, Blast_Score=77, Evalue=5e-14,
Organism=Drosophila melanogaster, GI45549022, Length=226, Percent_Identity=28.3185840707965, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24586587, Length=209, Percent_Identity=29.6650717703349, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24586591, Length=209, Percent_Identity=28.7081339712919, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006048
- InterPro:   IPR013784
- InterPro:   IPR006046
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR002044
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR002909 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF00686 CBM_20; PF01833 TIG [H]

EC number: =3.2.1.133 [H]

Molecular weight: Translated: 74288; Mature: 74288

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS51166 CBM20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQTPPSQFSEEQYKIENANAEVQALIESPTPETEIDLEFLYTRDIEFRQETIYFLVVDR
CCCCCCCHHCCHHEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEE
FYDGDPENSEGYNPELYDPNGEDWGKYWGGDLQGVIDKLDYLKDMGVTALWLTPLFEQVE
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELFVGNAAMHGYWTKDFKRLNPRYIGKDENPSLNNTQETRNTTFDRLVTELHKRKMKLIL
HHHHCCCHHCCEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DIVCNHSSPDTSGSKGELYDDGVKIADFNNDVNHWYHHYGEVEDWEDDWQVQNCELSGLA
HHHCCCCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEECEEEEEEE
TFNENNTEYRQYIKLAIKQWLDRGVDALRVDTVKHMPIWFWQEFTGDMYNHKPDVFIFGE
EECCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCEEEHHHHCCHHHCCCCCEEEEEE
WIYNHPSDDLSVEFANNSGMTLLDFGLCVAIRGALAQGAEGGFHLIQEVFDQDYRYNGAT
EECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHH
ELITFVDNHDMPRFQSLNPDPAMLKVAIALIMTSRGIPCIYYGTEQYLHDDTNGGNDPYN
HEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCC
RPMMGNWDTDTEVYRYLRLLSGIRRLNPAISMGSQWQKYLTSDVYCYVRRYRSSVCFVAL
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
NRGAELILPEVQTDLPDGEHTCAVTRNKFEVKDGKIYNLQLEERGVMVLSHVGERVKAQT
CCCCEEEECHHHCCCCCCCCEEEEECCEEEECCCEEEEEEECCCCCHHHHHHCHHHEEEE
IVRVQLNGVHTQPGETIVVVGDCPELGNWDISKAYPLEYINSNTWFAEIPFDESAGKLIS
EEEEEECCEECCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCEEE
YKYAMWREGRSPLRENILNRRWVVAKEGTVKWRDTWASGRES
EHHHHHHCCCCHHHHHHCCCEEEEEECCCEEEEECCCCCCCC
>Mature Secondary Structure
MVQTPPSQFSEEQYKIENANAEVQALIESPTPETEIDLEFLYTRDIEFRQETIYFLVVDR
CCCCCCCHHCCHHEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEE
FYDGDPENSEGYNPELYDPNGEDWGKYWGGDLQGVIDKLDYLKDMGVTALWLTPLFEQVE
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELFVGNAAMHGYWTKDFKRLNPRYIGKDENPSLNNTQETRNTTFDRLVTELHKRKMKLIL
HHHHCCCHHCCEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DIVCNHSSPDTSGSKGELYDDGVKIADFNNDVNHWYHHYGEVEDWEDDWQVQNCELSGLA
HHHCCCCCCCCCCCCCCEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEECEEEEEEE
TFNENNTEYRQYIKLAIKQWLDRGVDALRVDTVKHMPIWFWQEFTGDMYNHKPDVFIFGE
EECCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCEEEHHHHCCHHHCCCCCEEEEEE
WIYNHPSDDLSVEFANNSGMTLLDFGLCVAIRGALAQGAEGGFHLIQEVFDQDYRYNGAT
EECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHH
ELITFVDNHDMPRFQSLNPDPAMLKVAIALIMTSRGIPCIYYGTEQYLHDDTNGGNDPYN
HEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCC
RPMMGNWDTDTEVYRYLRLLSGIRRLNPAISMGSQWQKYLTSDVYCYVRRYRSSVCFVAL
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
NRGAELILPEVQTDLPDGEHTCAVTRNKFEVKDGKIYNLQLEERGVMVLSHVGERVKAQT
CCCCEEEECHHHCCCCCCCCEEEEECCEEEECCCEEEEEEECCCCCHHHHHHCHHHEEEE
IVRVQLNGVHTQPGETIVVVGDCPELGNWDISKAYPLEYINSNTWFAEIPFDESAGKLIS
EEEEEECCEECCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCEEE
YKYAMWREGRSPLRENILNRRWVVAKEGTVKWRDTWASGRES
EHHHHHHCCCCHHHHHHCCCEEEEEECCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10387084 [H]