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The map label for this gene is 17227661

Identifier: 17227661

GI number: 17227661

Start: 168634

End: 171099

Strand: Direct

Name: 17227661

Synonym: alr0165

Alternate gene names: NA

Gene position: 168634-171099 (Clockwise)

Preceding gene: 17227658

Following gene: 17227665

Centisome position: 2.63

GC content: 47.32

Gene sequence:

>2466_bases
ATGTCAGACACGAATGTTATCGCTACTGTGTCATCATCCCCAGCGTCCTTTGTTACTCTTTTACAAGAAAAAATTGCCCT
AATTCGCAGTACTCTGCGCCCAGGACAACAACAAATGGCTGACTGGCAGTCGGGGCCTTTGGCGGTATCGGCTGTACCGG
GTGCTGGTAAATCTACGGGGATGGCGGCGGCGGCGGCGATCGCTATTGCTCGTCAGTATCAGCAGGCGGCGGAGTCGCGC
ACATCTTCCCGTCGTCAGTTGGTGGTGGTTACTTTTACTCGCTCTGCGGCTGCCAATATTAAAGCAAAAATTCGTCACTA
TCTAAAGCAATTATCATTACCACAAACTGGTTTTGCTGTTTACACTCTGCACGGTTTGGCGTTGAATATTGCCAGCCGCC
ATCCTGATTTATCAGGGTTAGAGTTAGAAAATGTCACCCTCATCACCCCTAACCAAAGCCATCGCTTTATTCGTACCGCA
GTTGAACAATGGATTAATAATCATCCCCGGCTTTATTTGCGGTTATTGGAAGGACAGCAATTTGATGGTGAAGAAACAGA
AAGGTTACGTCGCCAATCAGTATTGCGGACGGAAATTTTACCGGATTTGGCAACTACCGTGATTCATGAAGCCAAAAGTT
CTGGTATATCACCAGAGCAACTACAGCAATGGAGTCAAGAAACTACAGACGCTTATGAGATTTTAACTATAGCGGCGGGT
TTATACGAACAGTATCAAAACCTGATGCGATCGCGCGACTTCATCGACTACGACGACATGATTTTAGCCGCCCTACGCGT
CCTGGAAAACGACAGCGCCCGACGCATTGAGCAAAACCAAGTTTTCGCCGTCTTTGAAGACGAAGCCCAAGACTCTAGCC
CCTTGCAAACGCAGTTATTAGAGATTTTGGCGAGTGGTGGAGAGACAGGGGGCAGGGGGCAGGGGAAGCAGGGGGCAGGG
GGCAGGGAGCAGGGGGCAGGGGGAGAACTGACTGCAAGATTTTCGCCCAATCCCCAGTCCCCAATCCCCAGTCCCCAATC
CCCAGTCCCCAATCCCCAGTCTCCTATCAACTTAATCCGTGTCGGCGACCCCAACCAAGCAATTAACTCTACTTTTACCC
CGGCTGATCCAATTTATTTTCGGGAATTTTGCCAAGAGTGCGATCGCTCTCATAAACTAGCGACAATGGATCAAGCTGGT
CGTAGTACCACCATGATTATTGCTGCCGCTAACTTCGCGCTGGAATGGGTAAATGATTCTTACGATAAAAATAAAAAGTC
TTCCCATCTTCATCTTTCTGCGCCCTTTAGTCTGCAAAAAATACATCCTGTCCATCAAACTGATGTCAACCCAGCACCAG
TAGGCAGAGGATTAGAATTACATAGACCCCGTGATATTTATCACACTGTAGAATTGCTATCTCAAAGGGTGATTGAGCTA
TTAACCGAAGATATGGGCAAGAGTGCGGCGGTGTTAGTGCGGGAGAATCGCCAAGGACGTTGGTTGGTAGAGGCGCTAGC
ACCTAAGTGTAAAGAGCATAATATTACACTATTTGACGTGGGAGAAAGCGATCGCCGTTCTCATGTTCCTCAAGAAATTT
TAGCGTTATTGCAATTTTGCGATCGCCCCCATTCCCCCGATTATCTCAAAGCTGCTTTAGAAGTATTGGTAAAGCGCCAA
TTAATTCCGACTCAAGACCTCAACGCCTTGGCTAGTCTACCAGAAGAATTTTTGTATCCTGGCCCCTTAGCTGCACCCCA
GTCAGAACTAGTCCAAAAAGCCTCTCATCTTTGCCGTAGTTTACTGCGCGCACGTTTGGAATTGCCTTTATATCAGATTA
TTTCTTTCCTCGCCCTGACGTTAAATTATGACCAAGCGGAACTGGCGACTGCTGATAAACTTTCGGAACGGGTAAACAAG
CAAATAGCGGGTAACAACTCAATGGGGGCTATGCTTTCAGCCTTAAGTGAAATCGTCAATTCCGAACGTTTTGAACCTGT
GGAAACCGATGATTCGGAAGCCCGTTACACCCGCAATGGTCAATTAACGATTATCACCATGCACAAAGCCAAGGGGCTGG
ATTGGAATTATGTTTTTATCCCCTTCCTCCATGAAAACTTAATTCCTGGGAGATTTTGGGTTCCACCCCAAAGCCAGTTT
TTGGGTGACTTTACTTTATCAGAAGTTGCCCGCGCCCAGATTCGGGCTGCACTTCATGGTGAAACTGGAATACCGGAAGT
AACGTCAGCTTGGGAGCAAGCAAAACACCTGAAAACGGCAGAAGAATATCGTTTACTCTATGTGGCGATGACGAGAGCAA
AGCAATTATTGTGGATGTCTGCGGCTCAGAAAGCACCGTTTACTTGGAGTAAACCAGAGAATTTACAAGAACAAGCCCCT
TGTCCAGTTTTTTCCGCATTAAAGCGCCAGTTTCCTGAATTTGTAATTCACACTCAGCCCTCATGA

Upstream 100 bases:

>100_bases
CAAAATGAGATTATTCTGATTTCCCTGCATCAGATTGATATTGACATACACTATTCACACAGCACAGTCTACTTGATCAA
CAATAGTAAGAAAACTAGAT

Downstream 100 bases:

>100_bases
ATCGTCAAGGTTAGCTAATAGTTCTAAAATGACTCCGTTCGTCCAACCAAAACCTATCTCGTTAGAACTATAGCCAAAGC
AGATTTCATCGGAAACTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: UvrD/REP Helicase Domain-Containing Protein; Helicase; DNA Helicase; ATP-Dependent DNA Helicase; UvrD/Rep Family Helicase; UvrD/REP Helicase Subfamily; UvrD/REP Helicase Domain Protein; ATP-Dependent DNA Helicase PcrA; Superfamily I DNA/RNA Helicase

Number of amino acids: Translated: 821; Mature: 820

Protein sequence:

>821_residues
MSDTNVIATVSSSPASFVTLLQEKIALIRSTLRPGQQQMADWQSGPLAVSAVPGAGKSTGMAAAAAIAIARQYQQAAESR
TSSRRQLVVVTFTRSAAANIKAKIRHYLKQLSLPQTGFAVYTLHGLALNIASRHPDLSGLELENVTLITPNQSHRFIRTA
VEQWINNHPRLYLRLLEGQQFDGEETERLRRQSVLRTEILPDLATTVIHEAKSSGISPEQLQQWSQETTDAYEILTIAAG
LYEQYQNLMRSRDFIDYDDMILAALRVLENDSARRIEQNQVFAVFEDEAQDSSPLQTQLLEILASGGETGGRGQGKQGAG
GREQGAGGELTARFSPNPQSPIPSPQSPVPNPQSPINLIRVGDPNQAINSTFTPADPIYFREFCQECDRSHKLATMDQAG
RSTTMIIAAANFALEWVNDSYDKNKKSSHLHLSAPFSLQKIHPVHQTDVNPAPVGRGLELHRPRDIYHTVELLSQRVIEL
LTEDMGKSAAVLVRENRQGRWLVEALAPKCKEHNITLFDVGESDRRSHVPQEILALLQFCDRPHSPDYLKAALEVLVKRQ
LIPTQDLNALASLPEEFLYPGPLAAPQSELVQKASHLCRSLLRARLELPLYQIISFLALTLNYDQAELATADKLSERVNK
QIAGNNSMGAMLSALSEIVNSERFEPVETDDSEARYTRNGQLTIITMHKAKGLDWNYVFIPFLHENLIPGRFWVPPQSQF
LGDFTLSEVARAQIRAALHGETGIPEVTSAWEQAKHLKTAEEYRLLYVAMTRAKQLLWMSAAQKAPFTWSKPENLQEQAP
CPVFSALKRQFPEFVIHTQPS

Sequences:

>Translated_821_residues
MSDTNVIATVSSSPASFVTLLQEKIALIRSTLRPGQQQMADWQSGPLAVSAVPGAGKSTGMAAAAAIAIARQYQQAAESR
TSSRRQLVVVTFTRSAAANIKAKIRHYLKQLSLPQTGFAVYTLHGLALNIASRHPDLSGLELENVTLITPNQSHRFIRTA
VEQWINNHPRLYLRLLEGQQFDGEETERLRRQSVLRTEILPDLATTVIHEAKSSGISPEQLQQWSQETTDAYEILTIAAG
LYEQYQNLMRSRDFIDYDDMILAALRVLENDSARRIEQNQVFAVFEDEAQDSSPLQTQLLEILASGGETGGRGQGKQGAG
GREQGAGGELTARFSPNPQSPIPSPQSPVPNPQSPINLIRVGDPNQAINSTFTPADPIYFREFCQECDRSHKLATMDQAG
RSTTMIIAAANFALEWVNDSYDKNKKSSHLHLSAPFSLQKIHPVHQTDVNPAPVGRGLELHRPRDIYHTVELLSQRVIEL
LTEDMGKSAAVLVRENRQGRWLVEALAPKCKEHNITLFDVGESDRRSHVPQEILALLQFCDRPHSPDYLKAALEVLVKRQ
LIPTQDLNALASLPEEFLYPGPLAAPQSELVQKASHLCRSLLRARLELPLYQIISFLALTLNYDQAELATADKLSERVNK
QIAGNNSMGAMLSALSEIVNSERFEPVETDDSEARYTRNGQLTIITMHKAKGLDWNYVFIPFLHENLIPGRFWVPPQSQF
LGDFTLSEVARAQIRAALHGETGIPEVTSAWEQAKHLKTAEEYRLLYVAMTRAKQLLWMSAAQKAPFTWSKPENLQEQAP
CPVFSALKRQFPEFVIHTQPS
>Mature_820_residues
SDTNVIATVSSSPASFVTLLQEKIALIRSTLRPGQQQMADWQSGPLAVSAVPGAGKSTGMAAAAAIAIARQYQQAAESRT
SSRRQLVVVTFTRSAAANIKAKIRHYLKQLSLPQTGFAVYTLHGLALNIASRHPDLSGLELENVTLITPNQSHRFIRTAV
EQWINNHPRLYLRLLEGQQFDGEETERLRRQSVLRTEILPDLATTVIHEAKSSGISPEQLQQWSQETTDAYEILTIAAGL
YEQYQNLMRSRDFIDYDDMILAALRVLENDSARRIEQNQVFAVFEDEAQDSSPLQTQLLEILASGGETGGRGQGKQGAGG
REQGAGGELTARFSPNPQSPIPSPQSPVPNPQSPINLIRVGDPNQAINSTFTPADPIYFREFCQECDRSHKLATMDQAGR
STTMIIAAANFALEWVNDSYDKNKKSSHLHLSAPFSLQKIHPVHQTDVNPAPVGRGLELHRPRDIYHTVELLSQRVIELL
TEDMGKSAAVLVRENRQGRWLVEALAPKCKEHNITLFDVGESDRRSHVPQEILALLQFCDRPHSPDYLKAALEVLVKRQL
IPTQDLNALASLPEEFLYPGPLAAPQSELVQKASHLCRSLLRARLELPLYQIISFLALTLNYDQAELATADKLSERVNKQ
IAGNNSMGAMLSALSEIVNSERFEPVETDDSEARYTRNGQLTIITMHKAKGLDWNYVFIPFLHENLIPGRFWVPPQSQFL
GDFTLSEVARAQIRAALHGETGIPEVTSAWEQAKHLKTAEEYRLLYVAMTRAKQLLWMSAAQKAPFTWSKPENLQEQAPC
PVFSALKRQFPEFVIHTQPS

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91492; Mature: 91361

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTNVIATVSSSPASFVTLLQEKIALIRSTLRPGQQQMADWQSGPLAVSAVPGAGKSTG
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCCCCCCH
MAAAAAIAIARQYQQAAESRTSSRRQLVVVTFTRSAAANIKAKIRHYLKQLSLPQTGFAV
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEE
YTLHGLALNIASRHPDLSGLELENVTLITPNQSHRFIRTAVEQWINNHPRLYLRLLEGQQ
EEEHHHHHHHHHCCCCCCCCEECCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
FDGEETERLRRQSVLRTEILPDLATTVIHEAKSSGISPEQLQQWSQETTDAYEILTIAAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LYEQYQNLMRSRDFIDYDDMILAALRVLENDSARRIEQNQVFAVFEDEAQDSSPLQTQLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCHHHHHHH
EILASGGETGGRGQGKQGAGGREQGAGGELTARFSPNPQSPIPSPQSPVPNPQSPINLIR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
VGDPNQAINSTFTPADPIYFREFCQECDRSHKLATMDQAGRSTTMIIAAANFALEWVNDS
ECCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHCCCCEEEEEEECCHHHHHHCCC
YDKNKKSSHLHLSAPFSLQKIHPVHQTDVNPAPVGRGLELHRPRDIYHTVELLSQRVIEL
CCCCCCCCEEEEECCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LTEDMGKSAAVLVRENRQGRWLVEALAPKCKEHNITLFDVGESDRRSHVPQEILALLQFC
HHHHCCCCEEEEEEECCCCCCHHHHHCCCHHHCCEEEEECCCCHHHHCCHHHHHHHHHHH
DRPHSPDYLKAALEVLVKRQLIPTQDLNALASLPEEFLYPGPLAAPQSELVQKASHLCRS
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHH
LLRARLELPLYQIISFLALTLNYDQAELATADKLSERVNKQIAGNNSMGAMLSALSEIVN
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SERFEPVETDDSEARYTRNGQLTIITMHKAKGLDWNYVFIPFLHENLIPGRFWVPPQSQF
CCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCEEEEEEHHCCCCCCCEECCCHHHH
LGDFTLSEVARAQIRAALHGETGIPEVTSAWEQAKHLKTAEEYRLLYVAMTRAKQLLWMS
HCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AAQKAPFTWSKPENLQEQAPCPVFSALKRQFPEFVIHTQPS
HHCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure 
SDTNVIATVSSSPASFVTLLQEKIALIRSTLRPGQQQMADWQSGPLAVSAVPGAGKSTG
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCCCCCCH
MAAAAAIAIARQYQQAAESRTSSRRQLVVVTFTRSAAANIKAKIRHYLKQLSLPQTGFAV
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEE
YTLHGLALNIASRHPDLSGLELENVTLITPNQSHRFIRTAVEQWINNHPRLYLRLLEGQQ
EEEHHHHHHHHHCCCCCCCCEECCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
FDGEETERLRRQSVLRTEILPDLATTVIHEAKSSGISPEQLQQWSQETTDAYEILTIAAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LYEQYQNLMRSRDFIDYDDMILAALRVLENDSARRIEQNQVFAVFEDEAQDSSPLQTQLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCHHHHHHH
EILASGGETGGRGQGKQGAGGREQGAGGELTARFSPNPQSPIPSPQSPVPNPQSPINLIR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
VGDPNQAINSTFTPADPIYFREFCQECDRSHKLATMDQAGRSTTMIIAAANFALEWVNDS
ECCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHCCCCEEEEEEECCHHHHHHCCC
YDKNKKSSHLHLSAPFSLQKIHPVHQTDVNPAPVGRGLELHRPRDIYHTVELLSQRVIEL
CCCCCCCCEEEEECCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LTEDMGKSAAVLVRENRQGRWLVEALAPKCKEHNITLFDVGESDRRSHVPQEILALLQFC
HHHHCCCCEEEEEEECCCCCCHHHHHCCCHHHCCEEEEECCCCHHHHCCHHHHHHHHHHH
DRPHSPDYLKAALEVLVKRQLIPTQDLNALASLPEEFLYPGPLAAPQSELVQKASHLCRS
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHH
LLRARLELPLYQIISFLALTLNYDQAELATADKLSERVNKQIAGNNSMGAMLSALSEIVN
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SERFEPVETDDSEARYTRNGQLTIITMHKAKGLDWNYVFIPFLHENLIPGRFWVPPQSQF
CCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCEEEEEEHHCCCCCCCEECCCHHHH
LGDFTLSEVARAQIRAALHGETGIPEVTSAWEQAKHLKTAEEYRLLYVAMTRAKQLLWMS
HCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AAQKAPFTWSKPENLQEQAPCPVFSALKRQFPEFVIHTQPS
HHCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA