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The map label for this gene is ydcZ [H]

Identifier: 16764935

GI number: 16764935

Start: 1678860

End: 1679309

Strand: Direct

Name: ydcZ [H]

Synonym: STM1591

Alternate gene names: 16764935

Gene position: 1678860-1679309 (Clockwise)

Preceding gene: 16764934

Following gene: 16764937

Centisome position: 34.56

GC content: 55.78

Gene sequence:

>450_bases
ATGAACCAGTCGCTGACGCTCATCTTTTTGATCGCCGCCGGTGTCGGGCTGGTGGTACAAAACAGTATTATGGTGCGTAT
TACGCAGACATCATCGACGATTCTGATCGCTATGCTGTTGAACTCGCTGGTAGGGATCGTTTTATTTGTGACGATATTGT
GGTTTAAGCAAGGCGCTACGGGCTTCGGCGAGCTGGTCGCCAGCGTTCGCTGGTGGACATTGATCCCCGGTCTGCTGGGG
TCATTTTTTGTATTTGCCAGCATTAGCGGGTATCAGAACGTTGGCGCCGCGACGACTATCGCGGTACTGGTCGCCAGCCA
GTTAATCGGCGGACTGGCGCTGGATATCGCGCGTAGCCACGGCGTCACGTTACGCGCAATGGTCGGGCCGGCGTTTGGCG
CGCTGTTGCTGGTCATTGGCGCATGGCTGATTGCGAAGCGCCAGTTTTAA

Upstream 100 bases:

>100_bases
CCGCGCAAATGCCGCAGGTCGGCGTAAAATTTGGCCGTTGGTTAGATCTTACGTTTATGCAGCTCCAGCTTGATGAACAC
GCCGCGCCGGACGCCTGCTG

Downstream 100 bases:

>100_bases
TGGGTTACAGGATCGTGCCGCCTTTGGTGAGCTGCTCGCGGCGCGCGTCCCGATCTTCTTGATATTGCCTGCCGTGATGC
GCGATAGCCGTGCGTAAACG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNQSLTLIFLIAAGVGLVVQNSIMVRITQTSSTILIAMLLNSLVGIVLFVTILWFKQGATGFGELVASVRWWTLIPGLLG
SFFVFASISGYQNVGAATTIAVLVASQLIGGLALDIARSHGVTLRAMVGPAFGALLLVIGAWLIAKRQF

Sequences:

>Translated_149_residues
MNQSLTLIFLIAAGVGLVVQNSIMVRITQTSSTILIAMLLNSLVGIVLFVTILWFKQGATGFGELVASVRWWTLIPGLLG
SFFVFASISGYQNVGAATTIAVLVASQLIGGLALDIARSHGVTLRAMVGPAFGALLLVIGAWLIAKRQF
>Mature_149_residues
MNQSLTLIFLIAAGVGLVVQNSIMVRITQTSSTILIAMLLNSLVGIVLFVTILWFKQGATGFGELVASVRWWTLIPGLLG
SFFVFASISGYQNVGAATTIAVLVASQLIGGLALDIARSHGVTLRAMVGPAFGALLLVIGAWLIAKRQF

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787718, Length=149, Percent_Identity=86.5771812080537, Blast_Score=250, Evalue=3e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006750 [H]

Pfam domain/function: PF04657 DUF606 [H]

EC number: NA

Molecular weight: Translated: 15718; Mature: 15718

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSLTLIFLIAAGVGLVVQNSIMVRITQTSSTILIAMLLNSLVGIVLFVTILWFKQGAT
CCCCHHHHHHHHCCHHHHEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GFGELVASVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLIGGLALDIARSH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GVTLRAMVGPAFGALLLVIGAWLIAKRQF
CCEEEEHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQSLTLIFLIAAGVGLVVQNSIMVRITQTSSTILIAMLLNSLVGIVLFVTILWFKQGAT
CCCCHHHHHHHHCCHHHHEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GFGELVASVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLIGGLALDIARSH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GVTLRAMVGPAFGALLLVIGAWLIAKRQF
CCEEEEHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]