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The map label for this gene is yncA [H]

Identifier: 16764934

GI number: 16764934

Start: 1678345

End: 1678860

Strand: Direct

Name: yncA [H]

Synonym: STM1590

Alternate gene names: 16764934

Gene position: 1678345-1678860 (Clockwise)

Preceding gene: 16764931

Following gene: 16764935

Centisome position: 34.55

GC content: 54.65

Gene sequence:

>516_bases
ATGACGATTCGCTTTGCCGATAAAGCAGACTGCGCCGCGATTACCGAAATCTATAACCATGCGGTATTACATACTGCGGC
CATCTGGAATGATCGGACGGTCGATACGGATAATCGCCTTGCCTGGTATGAGGCCCGTCAATTACTGGGCTATCCGGTGC
TGGTAAGCGAAGAAAATGGCGTGGTGACTGGCTATGCATCATTTGGCGATTGGCGCAGTTTCGACGGTTTTCGCTATACC
GTCGAGCACTCGGTTTATGTTCATCCGGCGCACCAGGGGAAAGGACTGGGGCGAAAGCTGCTCAGCAGACTGATCGACGA
AGCCCGACGCTGCGGCAAGCATGTGATGGTGGCCGGTATTGAGTCACAGAATGCCGCCTCGATACGCCTACATCATTCGC
TGGGATTTACCGTCACCGCGCAAATGCCGCAGGTCGGCGTAAAATTTGGCCGTTGGTTAGATCTTACGTTTATGCAGCTC
CAGCTTGATGAACACGCCGCGCCGGACGCCTGCTGA

Upstream 100 bases:

>100_bases
CCCCCTTCTCGCTAAATATGAATTCTTGCGCTAATTCGTTGATTTATGCCGCCTTCAATAGTATTTCTAACACTATCGTA
AACATTCCCTGGGGTTCCCT

Downstream 100 bases:

>100_bases
TGAACCAGTCGCTGACGCTCATCTTTTTGATCGCCGCCGGTGTCGGGCTGGTGGTACAAAACAGTATTATGGTGCGTATT
ACGCAGACATCATCGACGAT

Product: acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYT
VEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVGVKFGRWLDLTFMQL
QLDEHAAPDAC

Sequences:

>Translated_171_residues
MTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYT
VEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVGVKFGRWLDLTFMQL
QLDEHAAPDAC
>Mature_170_residues
TIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYTV
EHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVGVKFGRWLDLTFMQLQ
LDEHAAPDAC

Specific function: Unknown

COG id: COG1247

COG function: function code M; Sortase and related acyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787719, Length=170, Percent_Identity=87.0588235294118, Blast_Score=312, Evalue=7e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.-

Molecular weight: Translated: 19188; Mature: 19057

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENG
CEEEECCCCCHHHHHHHHHHHHHHHEEECCCCEECCCCCCHHHHHHHHHCCCEEEECCCC
VVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGI
EEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC
ESQNAASIRLHHSLGFTVTAQMPQVGVKFGRWLDLTFMQLQLDEHAAPDAC
CCCCCEEEEEEECCCEEEEECCCCCHHHHCCEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENG
EEEECCCCCHHHHHHHHHHHHHHHEEECCCCEECCCCCCHHHHHHHHHCCCEEEECCCC
VVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGI
EEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC
ESQNAASIRLHHSLGFTVTAQMPQVGVKFGRWLDLTFMQLQLDEHAAPDAC
CCCCCEEEEEEECCCEEEEECCCCCHHHHCCEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]